RNA–Protein interactions for RNA: YDR135C

YCF1, Transcript of Vacuolar glutathione S-conjugate transporter, yeast

Gene YCF1, Length 4,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCF1	YDR135C	HRQ1	Q05549	1077 aa		4.87	□□□□□ -1.63
YCF1	YDR135C	APC1	P53886	1748 aa		4.87	□□□□□ -1.63
YCF1	YDR135C	SWE1	P32944	819 aa		4.86	□□□□□ -1.63
YCF1	YDR135C	LTV1	P34078	463 aa		4.86	□□□□□ -1.63
YCF1	YDR135C	MDG1	P53885	366 aa		4.86	□□□□□ -1.63
YCF1	YDR135C	DLD1	P32891	587 aa		4.86	□□□□□ -1.63
YCF1	YDR135C	SSL2	Q00578	843 aa		4.86	□□□□□ -1.63
YCF1	YDR135C	CHZ1	P40019	153 aa	Predicted RBP	4.86	□□□□□ -1.63
YCF1	YDR135C	RTR1	P40084	226 aa	Predicted RBP	4.86	□□□□□ -1.63
YCF1	YDR135C	YOL087C	Q99247	1116 aa		4.86	□□□□□ -1.63
YCF1	YDR135C	AUS1	Q08409	1394 aa		4.86	□□□□□ -1.63
YCF1	YDR135C	MBR1	P23493	339 aa		4.85	□□□□□ -1.63
YCF1	YDR135C	FPR4	Q06205	392 aa	Predicted RBP	4.85	□□□□□ -1.63
YCF1	YDR135C	CSE4	P36012	229 aa		4.85	□□□□□ -1.63
YCF1	YDR135C	BRN1	P38170	754 aa		4.85	□□□□□ -1.63
YCF1	YDR135C	TRL1	P09880	827 aa	Known RBP	4.84	□□□□□ -1.63
YCF1	YDR135C	BYE1	P36106	594 aa		4.84	□□□□□ -1.63
YCF1	YDR135C	GCR2	Q01722	534 aa		4.84	□□□□□ -1.63
YCF1	YDR135C	TRP5	P00931	707 aa	Known RBP	4.84	□□□□□ -1.63
YCF1	YDR135C	MSH1	P25846	959 aa		4.84	□□□□□ -1.63
YCF1	YDR135C	STU2	P46675	888 aa		4.84	□□□□□ -1.63
YCF1	YDR135C	YNL035C	P53962	389 aa	Known RBP	4.84	□□□□□ -1.63
YCF1	YDR135C	RAD9	P14737	1309 aa		4.84	□□□□□ -1.64
YCF1	YDR135C	HST1	P53685	503 aa		4.84	□□□□□ -1.64
YCF1	YDR135C	HXT13	P39924	564 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	HYR1	P40581	163 aa	Known RBP	4.83	□□□□□ -1.64
YCF1	YDR135C	NKP2	Q06162	153 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	RRP5	Q05022	1729 aa	Known RBP	4.83	□□□□□ -1.64
YCF1	YDR135C	PBY1	P38254	753 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	TCD1	P38756	429 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	VPS20	Q04272	221 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	UTP13	Q05946	817 aa	Known RBP	4.83	□□□□□ -1.64
YCF1	YDR135C	YIL177C	P40434	1758 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	YJL225C	P40889	1758 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	YGL082W	P53155	381 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	VPS60	Q03390	229 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	SML1	Q04964	104 aa		4.83	□□□□□ -1.64
YCF1	YDR135C	HXT17	P53631	564 aa		4.82	□□□□□ -1.64
YCF1	YDR135C	LYS2	P07702	1392 aa		4.82	□□□□□ -1.64
YCF1	YDR135C	CWH41	P53008	833 aa		4.82	□□□□□ -1.64
YCF1	YDR135C	CEP3	P40969	608 aa		4.82	□□□□□ -1.64
YCF1	YDR135C	YMR102C	Q03177	834 aa		4.82	□□□□□ -1.64
YCF1	YDR135C	VPS4	P52917	437 aa		4.81	□□□□□ -1.64
YCF1	YDR135C	TAF8	Q03750	510 aa		4.81	□□□□□ -1.64
YCF1	YDR135C	RAD50	P12753	1312 aa		4.81	□□□□□ -1.64
YCF1	YDR135C	CYC8	P14922	966 aa		4.81	□□□□□ -1.64
YCF1	YDR135C	MNR2	P35724	969 aa		4.81	□□□□□ -1.64
YCF1	YDR135C	KRI1	P42846	591 aa	Known RBP	4.81	□□□□□ -1.64
YCF1	YDR135C	TIM50	Q02776	476 aa		4.81	□□□□□ -1.64
YCF1	YDR135C	HIM1	Q06674	414 aa		4.81	□□□□□ -1.64
YCF1	YDR135C	YGL140C	P53120	1219 aa		4.8	□□□□□ -1.64
YCF1	YDR135C	APC11	Q12157	165 aa		4.8	□□□□□ -1.64
YCF1	YDR135C	URB1	P34241	1764 aa	Known RBP	4.8	□□□□□ -1.64
YCF1	YDR135C	KEX1	P09620	729 aa		4.8	□□□□□ -1.64
YCF1	YDR135C	MSH3	P25336	1018 aa		4.8	□□□□□ -1.64
YCF1	YDR135C	MIC60	P36112	540 aa		4.8	□□□□□ -1.64
YCF1	YDR135C	RIX1	P38883	763 aa	Predicted RBP	4.8	□□□□□ -1.64
YCF1	YDR135C	MRS2	Q01926	470 aa		4.8	□□□□□ -1.64
YCF1	YDR135C	SFI1	Q12369	946 aa		4.8	□□□□□ -1.64
YCF1	YDR135C	DSN1	P40568	576 aa		4.79	□□□□□ -1.64
YCF1	YDR135C	COG8	Q04632	607 aa		4.79	□□□□□ -1.64
YCF1	YDR135C	ESC2	Q06340	456 aa		4.79	□□□□□ -1.64
YCF1	YDR135C	RNA1	P11745	407 aa	Known RBP	4.79	□□□□□ -1.64
YCF1	YDR135C	DEP1	P31385	405 aa		4.79	□□□□□ -1.64
YCF1	YDR135C	DID4	P36108	232 aa		4.79	□□□□□ -1.64
YCF1	YDR135C	PSH1	Q12161	406 aa		4.79	□□□□□ -1.64
YCF1	YDR135C	MRPL10	P36520	322 aa		4.78	□□□□□ -1.64
YCF1	YDR135C	NMD2	P38798	1089 aa	Known RBP	4.78	□□□□□ -1.64
YCF1	YDR135C	YGL081W	P53156	320 aa		4.78	□□□□□ -1.64
YCF1	YDR135C	VPS72	Q03388	795 aa		4.78	□□□□□ -1.64
YCF1	YDR135C	CLB1	P24868	471 aa		4.78	□□□□□ -1.64
YCF1	YDR135C	FRS2	P15625	503 aa	Known RBP	4.78	□□□□□ -1.64
YCF1	YDR135C	CDC16	P09798	840 aa		4.77	□□□□□ -1.65
YCF1	YDR135C	SRP54	P20424	541 aa	Known RBP	4.77	□□□□□ -1.65
YCF1	YDR135C	YKL068W-A	Q3E826	78 aa		4.77	□□□□□ -1.65
YCF1	YDR135C	SPB4	P25808	606 aa	Predicted RBP	4.77	□□□□□ -1.65
YCF1	YDR135C	ELM1	P32801	640 aa		4.76	□□□□□ -1.65
YCF1	YDR135C	RIM101	P33400	625 aa		4.76	□□□□□ -1.65
YCF1	YDR135C	RSM25	P40496	264 aa		4.76	□□□□□ -1.65
YCF1	YDR135C	MRX12	P47084	519 aa		4.76	□□□□□ -1.65
YCF1	YDR135C	ATE1	P16639	503 aa		4.76	□□□□□ -1.65
YCF1	YDR135C	ALD4	P46367	519 aa	Known RBP	4.76	□□□□□ -1.65
YCF1	YDR135C	MAK21	Q12176	1025 aa	Known RBP	4.76	□□□□□ -1.65
YCF1	YDR135C	SAP190	P36123	1033 aa		4.76	□□□□□ -1.65
YCF1	YDR135C	GYL1	Q04322	720 aa		4.76	□□□□□ -1.65
YCF1	YDR135C	NPR3	P38742	1146 aa		4.76	□□□□□ -1.65
YCF1	YDR135C	DIP2	Q12220	943 aa	Predicted RBP	4.76	□□□□□ -1.65
YCF1	YDR135C	VPS41	P38959	992 aa		4.75	□□□□□ -1.65
YCF1	YDR135C	UBP10	P53874	792 aa	Predicted RBP	4.75	□□□□□ -1.65
YCF1	YDR135C	RNT1	Q02555	471 aa		4.75	□□□□□ -1.65
YCF1	YDR135C	PEX19	Q07418	342 aa		4.75	□□□□□ -1.65
YCF1	YDR135C	TAP42	Q04372	366 aa		4.75	□□□□□ -1.65
YCF1	YDR135C	TLG2	Q08144	397 aa		4.75	□□□□□ -1.65
YCF1	YDR135C	TYS1	P36421	394 aa	Known RBP	4.75	□□□□□ -1.65
YCF1	YDR135C	ECM16	Q04217	1267 aa	Known RBP	4.75	□□□□□ -1.65
YCF1	YDR135C	CTI6	Q08923	506 aa		4.75	□□□□□ -1.65
YCF1	YDR135C	MSB4	Q12317	492 aa		4.75	□□□□□ -1.65
YCF1	YDR135C	BIK1	P11709	440 aa		4.74	□□□□□ -1.65
YCF1	YDR135C	SCT1	P32784	759 aa		4.74	□□□□□ -1.65
YCF1	YDR135C	RTT107	P38850	1070 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms