RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	ROM1	P53046	1155 aa		7	□□□□□ -1.29
LCB2	YDR062W	TBF1	Q02457	562 aa		7	□□□□□ -1.29
LCB2	YDR062W	SRS2	P12954	1174 aa		7	□□□□□ -1.29
LCB2	YDR062W	GLO3	P38682	493 aa	Known RBP	7	□□□□□ -1.29
LCB2	YDR062W	QDR1	P40475	563 aa		7	□□□□□ -1.29
LCB2	YDR062W	ACS2	P52910	683 aa	Known RBP	7	□□□□□ -1.29
LCB2	YDR062W	PUN1	Q06991	263 aa		7	□□□□□ -1.29
LCB2	YDR062W	FRT1	Q99332	602 aa		7	□□□□□ -1.29
LCB2	YDR062W	UBP9	P39967	754 aa		6.99	□□□□□ -1.29
LCB2	YDR062W	ATG36	P46983	293 aa		6.99	□□□□□ -1.29
LCB2	YDR062W	YRR1	Q12172	810 aa		6.99	□□□□□ -1.29
LCB2	YDR062W	MET4	P32389	672 aa		6.98	□□□□□ -1.29
LCB2	YDR062W	YEL023C	P39992	682 aa		6.98	□□□□□ -1.29
LCB2	YDR062W	PPG1	P32838	368 aa		6.97	□□□□□ -1.29
LCB2	YDR062W	NUG1	P40010	520 aa	Known RBP	6.97	□□□□□ -1.29
LCB2	YDR062W	RTS3	P53289	263 aa		6.97	□□□□□ -1.29
LCB2	YDR062W	FRA1	Q07825	749 aa		6.97	□□□□□ -1.29
LCB2	YDR062W	GAS4	Q08271	471 aa		6.97	□□□□□ -1.29
LCB2	YDR062W	MNL2	Q12205	849 aa		6.97	□□□□□ -1.29
LCB2	YDR062W	VAC8	P39968	578 aa		6.96	□□□□□ -1.29
LCB2	YDR062W	KEX2	P13134	814 aa		6.96	□□□□□ -1.3
LCB2	YDR062W	RRP14	P36080	434 aa	Known RBP	6.96	□□□□□ -1.3
LCB2	YDR062W	YJR008W	P47085	338 aa		6.96	□□□□□ -1.3
LCB2	YDR062W	STE20	Q03497	939 aa	Known RBP	6.96	□□□□□ -1.3
LCB2	YDR062W	SRP40	P32583	406 aa	Predicted RBP	6.95	□□□□□ -1.3
LCB2	YDR062W	FPR3	P38911	411 aa	Known RBP	6.95	□□□□□ -1.3
LCB2	YDR062W	FYV10	P40492	516 aa		6.95	□□□□□ -1.3
LCB2	YDR062W	ALD3	P54114	506 aa		6.95	□□□□□ -1.3
LCB2	YDR062W	UTP13	Q05946	817 aa	Known RBP	6.95	□□□□□ -1.3
LCB2	YDR062W	TEC1	P18412	486 aa		6.94	□□□□□ -1.3
LCB2	YDR062W	SOH1	P38633	127 aa		6.94	□□□□□ -1.3
LCB2	YDR062W	ALD6	P54115	500 aa	Known RBP	6.94	□□□□□ -1.3
LCB2	YDR062W	YDL206W	Q12424	762 aa		6.94	□□□□□ -1.3
LCB2	YDR062W	MST1	P07236	462 aa		6.93	□□□□□ -1.3
LCB2	YDR062W	GUT2	P32191	649 aa		6.93	□□□□□ -1.3
LCB2	YDR062W	ERF2	Q06551	359 aa		6.93	□□□□□ -1.3
LCB2	YDR062W	TSC13	Q99190	310 aa		6.93	□□□□□ -1.3
LCB2	YDR062W	YKL091C	P33324	310 aa	Known RBP	6.93	□□□□□ -1.3
LCB2	YDR062W	OSW7	P43611	510 aa		6.93	□□□□□ -1.3
LCB2	YDR062W	APL6	P46682	809 aa		6.93	□□□□□ -1.3
LCB2	YDR062W	DPL1	Q05567	589 aa		6.93	□□□□□ -1.3
LCB2	YDR062W	VAN1	P23642	535 aa		6.92	□□□□□ -1.3
LCB2	YDR062W	IOC3	P43596	787 aa		6.92	□□□□□ -1.3
LCB2	YDR062W	MSB4	Q12317	492 aa		6.92	□□□□□ -1.3
LCB2	YDR062W	MAD1	P40957	749 aa		6.91	□□□□□ -1.3
LCB2	YDR062W	YPR084W	Q06821	456 aa		6.91	□□□□□ -1.3
LCB2	YDR062W	TRS33	Q99394	268 aa		6.91	□□□□□ -1.3
LCB2	YDR062W	CIT2	P08679	460 aa		6.9	□□□□□ -1.3
LCB2	YDR062W	FIG4	P42837	879 aa		6.9	□□□□□ -1.3
LCB2	YDR062W	ALG12	P53730	551 aa		6.9	□□□□□ -1.3
LCB2	YDR062W	VPS16	Q03308	798 aa		6.9	□□□□□ -1.3
LCB2	YDR062W	PIN2	Q12057	282 aa		6.9	□□□□□ -1.3
LCB2	YDR062W	MIP1	P15801	1254 aa		6.9	□□□□□ -1.31
LCB2	YDR062W	PDI1	P17967	522 aa	Known RBP	6.9	□□□□□ -1.31
LCB2	YDR062W	NUD1	P32336	851 aa		6.9	□□□□□ -1.31
LCB2	YDR062W	PTC4	P38089	393 aa		6.9	□□□□□ -1.31
LCB2	YDR062W	LSO1	Q3E827	93 aa		6.9	□□□□□ -1.31
LCB2	YDR062W	SPT2	P06843	333 aa	Predicted RBP	6.89	□□□□□ -1.31
LCB2	YDR062W	SPR3	P41901	512 aa		6.89	□□□□□ -1.31
LCB2	YDR062W	YJL049W	P47048	450 aa		6.89	□□□□□ -1.31
LCB2	YDR062W	TUB4	P53378	473 aa		6.89	□□□□□ -1.31
LCB2	YDR062W	SSF2	Q12153	453 aa	Predicted RBP	6.89	□□□□□ -1.31
LCB2	YDR062W	CLN2	P20438	545 aa		6.88	□□□□□ -1.31
LCB2	YDR062W	MCM2	P29469	868 aa		6.88	□□□□□ -1.31
LCB2	YDR062W	RPT1	P33299	467 aa	Known RBP	6.88	□□□□□ -1.31
LCB2	YDR062W	RPA14	P50106	137 aa		6.88	□□□□□ -1.31
LCB2	YDR062W	RMD1	Q03441	430 aa		6.88	□□□□□ -1.31
LCB2	YDR062W	TRS120	Q04183	1289 aa		6.88	□□□□□ -1.31
LCB2	YDR062W	SPR28	Q04921	423 aa		6.88	□□□□□ -1.31
LCB2	YDR062W	UBX5	Q06682	500 aa		6.88	□□□□□ -1.31
LCB2	YDR062W	SWR1	Q05471	1514 aa		6.88	□□□□□ -1.31
LCB2	YDR062W	TOM20	P35180	183 aa		6.87	□□□□□ -1.31
LCB2	YDR062W	NSE3	Q05541	303 aa		6.87	□□□□□ -1.31
LCB2	YDR062W	MPC54	Q08550	464 aa		6.87	□□□□□ -1.31
LCB2	YDR062W	TSR4	P25040	408 aa		6.87	□□□□□ -1.31
LCB2	YDR062W	ISU2	Q12056	156 aa		6.87	□□□□□ -1.31
LCB2	YDR062W	WRS1	Q12109	432 aa	Known RBP	6.87	□□□□□ -1.31
LCB2	YDR062W	TCB3	Q03640	1545 aa	Known RBP	6.86	□□□□□ -1.31
LCB2	YDR062W	PHO4	P07270	312 aa	Known RBP	6.86	□□□□□ -1.31
LCB2	YDR062W	TFG1	P41895	735 aa	Predicted RBP	6.86	□□□□□ -1.31
LCB2	YDR062W	SUB1	P54000	292 aa	Known RBP	6.86	□□□□□ -1.31
LCB2	YDR062W	RPN4	Q03465	531 aa		6.86	□□□□□ -1.31
LCB2	YDR062W	YPR097W	Q06839	1073 aa		6.86	□□□□□ -1.31
LCB2	YDR062W	GPI13	Q07830	1017 aa		6.86	□□□□□ -1.31
LCB2	YDR062W	DNA2	P38859	1522 aa		6.85	□□□□□ -1.31
LCB2	YDR062W	SWE1	P32944	819 aa		6.85	□□□□□ -1.31
LCB2	YDR062W	NPL4	P33755	580 aa		6.85	□□□□□ -1.31
LCB2	YDR062W	YFL034W	P43564	1073 aa		6.85	□□□□□ -1.31
LCB2	YDR062W	AGE1	Q04412	482 aa		6.85	□□□□□ -1.31
LCB2	YDR062W	ALR1	Q08269	859 aa		6.85	□□□□□ -1.31
LCB2	YDR062W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.85	□□□□□ -1.31	not detected
LCB2	YDR062W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.84	□□□□□ -1.31	not detected
LCB2	YDR062W	SUV3	P32580	737 aa		6.84	□□□□□ -1.31
LCB2	YDR062W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.84	□□□□□ -1.31	RIP-Chip
LCB2	YDR062W	BOI1	P38041	980 aa	Known RBP	6.84	□□□□□ -1.32
LCB2	YDR062W	AIM9	P40053	627 aa	Known RBP	6.84	□□□□□ -1.32
LCB2	YDR062W	MID1	P41821	548 aa		6.84	□□□□□ -1.32
LCB2	YDR062W	POB3	Q04636	552 aa	Known RBP	6.84	□□□□□ -1.32
LCB2	YDR062W	TY1B-DR4	Q07793	1604 aa		6.83	□□□□□ -1.32
LCB2	YDR062W	UBP1	P25037	809 aa		6.83	□□□□□ -1.32

Retrieved 100 of 5,963 RNA–protein pairs in 215.1 ms