RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C FRK1Q03002 865 aaPredicted RBP5.13□□□□□ -1.59
BRE4YDL231C TAP42Q04372 366 aa5.13□□□□□ -1.59
BRE4YDL231C AOS1Q06624 347 aa5.13□□□□□ -1.59
BRE4YDL231C SPT21P35209 758 aa5.13□□□□□ -1.59
BRE4YDL231C TRP5P00931 707 aaKnown RBP5.13□□□□□ -1.59
BRE4YDL231C YKL133CP36066 463 aa5.12□□□□□ -1.59
BRE4YDL231C NUP133P36161 1157 aa5.12□□□□□ -1.59
BRE4YDL231C SLA1P32790 1244 aa5.12□□□□□ -1.59
BRE4YDL231C RCR1P38212 213 aa5.12□□□□□ -1.59
BRE4YDL231C YNG2P38806 282 aaKnown RBP5.12□□□□□ -1.59
BRE4YDL231C GYP7P48365 746 aa5.12□□□□□ -1.59
BRE4YDL231C AIM44Q99299 758 aa5.12□□□□□ -1.59
BRE4YDL231C RAD4P14736 754 aa5.12□□□□□ -1.59
BRE4YDL231C BUD27P43573 796 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
BRE4YDL231C POL32P47110 350 aa5.12□□□□□ -1.59
BRE4YDL231C PSK1P31374 1356 aa5.11□□□□□ -1.59
BRE4YDL231C YBP2P53169 641 aa5.11□□□□□ -1.59
BRE4YDL231C ENV9Q08651 330 aa5.11□□□□□ -1.59
BRE4YDL231C SLM3Q12093 417 aa5.11□□□□□ -1.59
BRE4YDL231C SER1P33330 395 aaKnown RBP5.1□□□□□ -1.59
BRE4YDL231C PTP3P40048 928 aa5.1□□□□□ -1.59
BRE4YDL231C RIM101P33400 625 aa5.1□□□□□ -1.59
BRE4YDL231C YIL092WP40497 633 aa5.1□□□□□ -1.59
BRE4YDL231C YGL082WP53155 381 aa5.1□□□□□ -1.59
BRE4YDL231C NSE3Q05541 303 aa5.1□□□□□ -1.59
BRE4YDL231C TY4B-HP0C2J7 1802 aa5.1□□□□□ -1.59
BRE4YDL231C TY4B-JP47024 1803 aa5.1□□□□□ -1.59
BRE4YDL231C SRT1Q03175 343 aa5.1□□□□□ -1.59
BRE4YDL231C CSI1Q04368 295 aa5.1□□□□□ -1.59
BRE4YDL231C COQ4O13525 335 aa5.09□□□□□ -1.59
BRE4YDL231C RPP0P05317 312 aaKnown RBP5.09□□□□□ -1.59
BRE4YDL231C RLF2Q12495 606 aa5.09□□□□□ -1.59
BRE4YDL231C AUS1Q08409 1394 aa5.09□□□□□ -1.59
BRE4YDL231C NTH2P35172 780 aa5.09□□□□□ -1.59
BRE4YDL231C IES2P40154 320 aa5.09□□□□□ -1.59
BRE4YDL231C DJP1P40564 432 aa5.08□□□□□ -1.6
BRE4YDL231C PRY3P47033 881 aa5.08□□□□□ -1.6
BRE4YDL231C ENT3P47160 408 aa5.08□□□□□ -1.6
BRE4YDL231C EAF7P53911 425 aaKnown RBP5.08□□□□□ -1.6
BRE4YDL231C APL2P36000 726 aaPredicted RBP5.07□□□□□ -1.6
BRE4YDL231C HEF3P53978 1044 aaKnown RBP5.07□□□□□ -1.6
BRE4YDL231C YRF1-2P40105 1681 aa5.07□□□□□ -1.6
BRE4YDL231C DMA2P53924 522 aa5.07□□□□□ -1.6
BRE4YDL231C MEC3Q02574 474 aa5.07□□□□□ -1.6
BRE4YDL231C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
BRE4YDL231C CTI6Q08923 506 aa5.07□□□□□ -1.6
BRE4YDL231C YRF1-4O13559 1382 aa5.07□□□□□ -1.6
BRE4YDL231C ILV3P39522 585 aaKnown RBP5.07□□□□□ -1.6
BRE4YDL231C IMH1Q06704 911 aaKnown RBP5.07□□□□□ -1.6
BRE4YDL231C KCC4P25389 1037 aa5.06□□□□□ -1.6
BRE4YDL231C RAD24P32641 659 aa5.06□□□□□ -1.6
BRE4YDL231C ADE16P54113 591 aaKnown RBP5.06□□□□□ -1.6
BRE4YDL231C RPO41P13433 1351 aaKnown RBP5.06□□□□□ -1.6
BRE4YDL231C COBP00163 385 aa5.06□□□□□ -1.6
BRE4YDL231C YNL050CP53952 270 aa5.06□□□□□ -1.6
BRE4YDL231C VAS1P07806 1104 aaKnown RBP5.05□□□□□ -1.6
BRE4YDL231C MRP7P12687 371 aa5.05□□□□□ -1.6
BRE4YDL231C RRP5Q05022 1729 aaKnown RBP5.05□□□□□ -1.6
BRE4YDL231C LAM6Q08001 693 aa5.05□□□□□ -1.6
BRE4YDL231C YIL177CP40434 1758 aa5.05□□□□□ -1.6
BRE4YDL231C YJL225CP40889 1758 aa5.05□□□□□ -1.6
BRE4YDL231C OSM1P21375 501 aaKnown RBP5.05□□□□□ -1.6
BRE4YDL231C RPN11P43588 306 aaKnown RBP5.04□□□□□ -1.6
BRE4YDL231C MAM1P40065 302 aa5.04□□□□□ -1.6
BRE4YDL231C FCP1Q03254 732 aa5.04□□□□□ -1.6
BRE4YDL231C RMT2Q03305 412 aa5.04□□□□□ -1.6
BRE4YDL231C NKP2Q06162 153 aa5.04□□□□□ -1.6
BRE4YDL231C NCB2Q92317 146 aa5.03□□□□□ -1.6
BRE4YDL231C TUM1Q08686 304 aaKnown RBP5.03□□□□□ -1.6
BRE4YDL231C PRP40P33203 583 aaKnown RBP5.02□□□□□ -1.61
BRE4YDL231C TEA1P47988 759 aa5.02□□□□□ -1.61
BRE4YDL231C INP54Q08227 384 aaKnown RBP5.02□□□□□ -1.61
BRE4YDL231C ADE6P38972 1358 aaKnown RBP5.02□□□□□ -1.61
BRE4YDL231C UGA3P26370 528 aa5.02□□□□□ -1.61
BRE4YDL231C PBY1P38254 753 aa5.02□□□□□ -1.61
BRE4YDL231C HPC2Q01448 625 aa5.02□□□□□ -1.61
BRE4YDL231C PRP43P53131 767 aaKnown RBP5.01□□□□□ -1.61
BRE4YDL231C FPR4Q06205 392 aaPredicted RBP5.01□□□□□ -1.61
BRE4YDL231C NOP53Q12080 455 aaKnown RBP5.01□□□□□ -1.61
BRE4YDL231C RRI2Q12348 645 aa5.01□□□□□ -1.61
BRE4YDL231C PDR18P53756 1333 aa5.01□□□□□ -1.61
BRE4YDL231C DOT5P40553 215 aa5.01□□□□□ -1.61
BRE4YDL231C ARP5P53946 755 aa5.01□□□□□ -1.61
BRE4YDL231C CAF20P12962 161 aaKnown RBP5□□□□□ -1.61
BRE4YDL231C PSH1Q12161 406 aa5□□□□□ -1.61
BRE4YDL231C YPP1P46951 817 aa5□□□□□ -1.61
BRE4YDL231C SNU71P53207 620 aaKnown RBP5□□□□□ -1.61
BRE4YDL231C ESF1Q06344 628 aaKnown RBP5□□□□□ -1.61
BRE4YDL231C SNU66Q12420 587 aaPredicted RBP5□□□□□ -1.61
BRE4YDL231C TOP1P04786 769 aa4.99□□□□□ -1.61
BRE4YDL231C HXT10P43581 546 aa4.99□□□□□ -1.61
BRE4YDL231C YOL057WQ08225 711 aa4.99□□□□□ -1.61
BRE4YDL231C APC1P53886 1748 aa4.99□□□□□ -1.61
BRE4YDL231C NUP145P49687 1317 aa4.99□□□□□ -1.61
BRE4YDL231C BRN1P38170 754 aa4.99□□□□□ -1.61
BRE4YDL231C VMS1Q04311 632 aaKnown RBP4.99□□□□□ -1.61
BRE4YDL231C SIS2P36024 562 aa4.99□□□□□ -1.61
BRE4YDL231C HXT17P53631 564 aa4.99□□□□□ -1.61
BRE4YDL231C SSP1P38871 571 aa4.98□□□□□ -1.61
BRE4YDL231C HXT13P39924 564 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms