RNA–Protein interactions for RNA: YDL031W

DBP10, Transcript of Putative ATP-dependent RNA helicase of the DEAD-box protein family, yeast

Gene DBP10, Length 2,988 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP10	YDL031W	YKR075C	P36155	307 aa		4.14	□□□□□ -1.75
DBP10	YDL031W	FOX2	Q02207	900 aa	Known RBP	4.14	□□□□□ -1.75
DBP10	YDL031W	YBL086C	P38177	466 aa		4.14	□□□□□ -1.75
DBP10	YDL031W	ALD3	P54114	506 aa		4.14	□□□□□ -1.75
DBP10	YDL031W	LEU2	P04173	364 aa	Predicted RBP	4.13	□□□□□ -1.75
DBP10	YDL031W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
DBP10	YDL031W	TIF11	P38912	153 aa	Known RBP	4.13	□□□□□ -1.75
DBP10	YDL031W	NPR2	P39923	615 aa		4.13	□□□□□ -1.75
DBP10	YDL031W	DOT5	P40553	215 aa		4.13	□□□□□ -1.75
DBP10	YDL031W	GRX1	P25373	110 aa	Known RBP	4.12	□□□□□ -1.75
DBP10	YDL031W	CTH1	P47976	325 aa		4.12	□□□□□ -1.75
DBP10	YDL031W	LAM6	Q08001	693 aa		4.12	□□□□□ -1.75
DBP10	YDL031W	YRF1-4	O13559	1382 aa		4.12	□□□□□ -1.75
DBP10	YDL031W	TOS1	P38288	455 aa		4.11	□□□□□ -1.75
DBP10	YDL031W	PPH3	P32345	308 aa		4.1	□□□□□ -1.75
DBP10	YDL031W	TAF8	Q03750	510 aa		4.1	□□□□□ -1.75
DBP10	YDL031W	AUS1	Q08409	1394 aa		4.09	□□□□□ -1.75
DBP10	YDL031W	TAF5	P38129	798 aa		4.09	□□□□□ -1.75
DBP10	YDL031W	SPE2	P21182	396 aa		4.09	□□□□□ -1.75
DBP10	YDL031W	ERT1	P38140	529 aa		4.09	□□□□□ -1.75
DBP10	YDL031W	DIB1	Q06819	143 aa	Predicted RBP	4.09	□□□□□ -1.75
DBP10	YDL031W	WSC3	Q12215	556 aa		4.09	□□□□□ -1.75
DBP10	YDL031W	TYW1	Q08960	810 aa	Known RBP	4.08	□□□□□ -1.76
DBP10	YDL031W	PRP45	P28004	379 aa	Predicted RBP	4.08	□□□□□ -1.76
DBP10	YDL031W	RTF1	P53064	558 aa		4.08	□□□□□ -1.76
DBP10	YDL031W	CTT1	P06115	562 aa		4.07	□□□□□ -1.76
DBP10	YDL031W	BUG1	Q12191	341 aa		4.07	□□□□□ -1.76
DBP10	YDL031W	MSB3	P48566	633 aa	Predicted RBP	4.07	□□□□□ -1.76
DBP10	YDL031W	PDI1	P17967	522 aa	Known RBP	4.06	□□□□□ -1.76
DBP10	YDL031W	RCM1	P53972	490 aa		4.06	□□□□□ -1.76
DBP10	YDL031W	MSB4	Q12317	492 aa		4.06	□□□□□ -1.76
DBP10	YDL031W	LDB19	Q12502	818 aa		4.06	□□□□□ -1.76
DBP10	YDL031W	YKL222C	P35995	705 aa		4.05	□□□□□ -1.76
DBP10	YDL031W	XKS1	P42826	600 aa		4.05	□□□□□ -1.76
DBP10	YDL031W	YKL133C	P36066	463 aa		4.05	□□□□□ -1.76
DBP10	YDL031W	RPN11	P43588	306 aa	Known RBP	4.05	□□□□□ -1.76
DBP10	YDL031W	PEX21	P50091	288 aa		4.05	□□□□□ -1.76
DBP10	YDL031W	NST1	P53935	1240 aa		4.05	□□□□□ -1.76
DBP10	YDL031W	YJL181W	P46987	611 aa		4.04	□□□□□ -1.76
DBP10	YDL031W	PFF1	P38244	976 aa		4.04	□□□□□ -1.76
DBP10	YDL031W	GSC2	P40989	1895 aa		4.03	□□□□□ -1.76
DBP10	YDL031W	SAP155	P43612	1002 aa		4.03	□□□□□ -1.76
DBP10	YDL031W	PUS5	Q06244	254 aa		4.03	□□□□□ -1.76
DBP10	YDL031W	FPK1	P53739	893 aa		4.03	□□□□□ -1.76
DBP10	YDL031W	PHM7	Q12252	991 aa		4.02	□□□□□ -1.77
DBP10	YDL031W	IOC2	Q12072	812 aa		4.02	□□□□□ -1.77
DBP10	YDL031W	NUP145	P49687	1317 aa		4.02	□□□□□ -1.77
DBP10	YDL031W	DUR1,2	P32528	1835 aa	Known RBP	4.01	□□□□□ -1.77
DBP10	YDL031W	UBX2	Q04228	584 aa		4.01	□□□□□ -1.77
DBP10	YDL031W	INP54	Q08227	384 aa	Known RBP	4.01	□□□□□ -1.77
DBP10	YDL031W	LEU3	P08638	886 aa		4.01	□□□□□ -1.77
DBP10	YDL031W	RGA1	P39083	1007 aa		4.01	□□□□□ -1.77
DBP10	YDL031W	CHZ1	P40019	153 aa	Predicted RBP	4.01	□□□□□ -1.77
DBP10	YDL031W	YAP5	P40574	245 aa		4.01	□□□□□ -1.77
DBP10	YDL031W	YJR008W	P47085	338 aa		4.01	□□□□□ -1.77
DBP10	YDL031W	ERO1	Q03103	563 aa		4.01	□□□□□ -1.77
DBP10	YDL031W	FAS2	P19097	1887 aa	Known RBP	4	□□□□□ -1.77
DBP10	YDL031W	COB	P00163	385 aa		4	□□□□□ -1.77
DBP10	YDL031W	GRE2	Q12068	342 aa	Known RBP	4	□□□□□ -1.77
DBP10	YDL031W	CSE4	P36012	229 aa		3.99	□□□□□ -1.77
DBP10	YDL031W	RRT14	P40470	206 aa		3.99	□□□□□ -1.77
DBP10	YDL031W	RCR1	P38212	213 aa		3.99	□□□□□ -1.77
DBP10	YDL031W	ENP1	P38333	483 aa	Known RBP	3.99	□□□□□ -1.77
DBP10	YDL031W	GRX6	Q12438	231 aa		3.99	□□□□□ -1.77
DBP10	YDL031W	GLC3	P32775	704 aa		3.99	□□□□□ -1.77
DBP10	YDL031W	EPS1	P40557	701 aa		3.99	□□□□□ -1.77
DBP10	YDL031W	NYV1	Q12255	253 aa		3.99	□□□□□ -1.77
DBP10	YDL031W	SRF1	Q12516	437 aa		3.99	□□□□□ -1.77
DBP10	YDL031W	SIT4	P20604	311 aa		3.98	□□□□□ -1.77
DBP10	YDL031W	UGA3	P26370	528 aa		3.98	□□□□□ -1.77
DBP10	YDL031W	SHC1	P39000	512 aa		3.98	□□□□□ -1.77
DBP10	YDL031W	ULI1	P43604	169 aa		3.98	□□□□□ -1.77
DBP10	YDL031W	SAC3	P46674	1301 aa		3.98	□□□□□ -1.77
DBP10	YDL031W	RAT1	Q02792	1006 aa	Known RBP	3.97	□□□□□ -1.77
DBP10	YDL031W	ADE16	P54113	591 aa	Known RBP	3.97	□□□□□ -1.77
DBP10	YDL031W	LYS4	P49367	693 aa	Predicted RBP	3.96	□□□□□ -1.77
DBP10	YDL031W	YER156C	P40093	338 aa	Known RBP	3.96	□□□□□ -1.78
DBP10	YDL031W	KIP3	P53086	805 aa	Known RBP	3.96	□□□□□ -1.78
DBP10	YDL031W	SSP2	Q08646	371 aa		3.96	□□□□□ -1.78
DBP10	YDL031W	YLR278C	Q05854	1341 aa		3.96	□□□□□ -1.78
DBP10	YDL031W	OSM1	P21375	501 aa	Known RBP	3.96	□□□□□ -1.78
DBP10	YDL031W	BCK2	P33306	851 aa		3.96	□□□□□ -1.78
DBP10	YDL031W	RPS24A	P0CX31	135 aa	Known RBP	3.95	□□□□□ -1.78
DBP10	YDL031W	RPS24B	P0CX32	135 aa	Known RBP	3.95	□□□□□ -1.78
DBP10	YDL031W	MAM1	P40065	302 aa		3.94	□□□□□ -1.78
DBP10	YDL031W	ATG13	Q06628	738 aa		3.94	□□□□□ -1.78
DBP10	YDL031W	ADR1	P07248	1323 aa		3.94	□□□□□ -1.78
DBP10	YDL031W	DSD1	P53095	428 aa		3.94	□□□□□ -1.78
DBP10	YDL031W	KCC4	P25389	1037 aa		3.93	□□□□□ -1.78
DBP10	YDL031W	PMD1	P32634	1753 aa		3.93	□□□□□ -1.78
DBP10	YDL031W	RMT2	Q03305	412 aa		3.93	□□□□□ -1.78
DBP10	YDL031W	HGH1	P48362	394 aa	Known RBP	3.93	□□□□□ -1.78
DBP10	YDL031W	KIN4	Q01919	800 aa		3.93	□□□□□ -1.78
DBP10	YDL031W	PSF3	Q12146	194 aa		3.93	□□□□□ -1.78
DBP10	YDL031W	AVT3	P36062	692 aa		3.93	□□□□□ -1.78
DBP10	YDL031W	YNL050C	P53952	270 aa		3.93	□□□□□ -1.78
DBP10	YDL031W	NPL4	P33755	580 aa		3.92	□□□□□ -1.78
DBP10	YDL031W	AOS1	Q06624	347 aa		3.92	□□□□□ -1.78
DBP10	YDL031W	SET1	P38827	1080 aa	Known RBP	3.92	□□□□□ -1.78
DBP10	YDL031W	RPP0	P05317	312 aa	Known RBP	3.91	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 105.6 ms