RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W VAC17P25591 423 aa6.44□□□□□ -1.38
YCL020WYCL020W KIP2P28743 706 aa6.44□□□□□ -1.38
YCL020WYCL020W HGH1P48362 394 aaKnown RBP6.44□□□□□ -1.38
YCL020WYCL020W TEC1P18412 486 aa6.43□□□□□ -1.38
YCL020WYCL020W YPR084WQ06821 456 aa6.43□□□□□ -1.38
YCL020WYCL020W SUP45P12385 437 aaKnown RBP6.42□□□□□ -1.38
YCL020WYCL020W IXR1P33417 597 aa6.42□□□□□ -1.38
YCL020WYCL020W APP1P53933 587 aa6.42□□□□□ -1.38
YCL020WYCL020W MCM16Q12262 181 aa6.42□□□□□ -1.38
YCL020WYCL020W MET32Q12041 191 aa6.41□□□□□ -1.38
YCL020WYCL020W EMP47P43555 445 aa6.4□□□□□ -1.39
YCL020WYCL020W YPR204WQ08995 1032 aa6.4□□□□□ -1.39
YCL020WYCL020W SYH1Q02875 849 aaKnown RBP6.39□□□□□ -1.39
YCL020WYCL020W HED1Q03937 162 aa6.39□□□□□ -1.39
YCL020WYCL020W RTG2P32608 588 aaKnown RBP6.38□□□□□ -1.39
YCL020WYCL020W RPL34BP40525 121 aaKnown RBP6.38□□□□□ -1.39
YCL020WYCL020W NAF1P53919 492 aaKnown RBP6.38□□□□□ -1.39
YCL020WYCL020W ENO1P00924 437 aaKnown RBP6.37□□□□□ -1.39
YCL020WYCL020W SPT5P27692 1063 aaKnown RBP6.36□□□□□ -1.39
YCL020WYCL020W GUT2P32191 649 aa6.35□□□□□ -1.39
YCL020WYCL020W RIM21P48565 533 aa6.35□□□□□ -1.39
YCL020WYCL020W RDS2P19541 446 aaKnown RBP6.34□□□□□ -1.39
YCL020WYCL020W STE20Q03497 939 aaKnown RBP6.34□□□□□ -1.39
YCL020WYCL020W CDC4P07834 779 aa6.33□□□□□ -1.4
YCL020WYCL020W FRA1Q07825 749 aa6.33□□□□□ -1.4
YCL020WYCL020W ASH1P34233 588 aa6.32□□□□□ -1.4
YCL020WYCL020W MRX10Q05648 414 aa6.32□□□□□ -1.4
YCL020WYCL020W EMW1P42842 904 aaKnown RBP6.3□□□□□ -1.4
YCL020WYCL020W CPS1P27614 576 aa6.29□□□□□ -1.4
YCL020WYCL020W MRT4P33201 236 aaKnown RBP6.29□□□□□ -1.4
YCL020WYCL020W SOH1P38633 127 aa6.29□□□□□ -1.4
YCL020WYCL020W HAL5P38970 855 aaKnown RBP6.29□□□□□ -1.4
YCL020WYCL020W KTR7P40504 517 aa6.29□□□□□ -1.4
YCL020WYCL020W ISR1Q06098 443 aaKnown RBP6.28□□□□□ -1.4
YCL020WYCL020W APL6P46682 809 aa6.27□□□□□ -1.41
YCL020WYCL020W HST3P53687 447 aa6.27□□□□□ -1.41
YCL020WYCL020W RLF2Q12495 606 aa6.27□□□□□ -1.41
YCL020WYCL020W AFT1P22149 690 aa6.26□□□□□ -1.41
YCL020WYCL020W YBL086CP38177 466 aa6.26□□□□□ -1.41
YCL020WYCL020W YPP1P46951 817 aa6.26□□□□□ -1.41
YCL020WYCL020W DFG5Q05031 458 aa6.26□□□□□ -1.41
YCL020WYCL020W ATG20Q07528 640 aa6.26□□□□□ -1.41
YCL020WYCL020W ENV9Q08651 330 aa6.26□□□□□ -1.41
YCL020WYCL020W MKS1P34072 584 aa6.25□□□□□ -1.41
YCL020WYCL020W TTI1P36097 1038 aa6.25□□□□□ -1.41
YCL020WYCL020W TAF7Q05021 590 aa6.25□□□□□ -1.41
YCL020WYCL020W YJR115WP47152 169 aa6.25□□□□□ -1.41
YCL020WYCL020W UGA3P26370 528 aa6.24□□□□□ -1.41
YCL020WYCL020W PEP12P32854 288 aa6.23□□□□□ -1.41
YCL020WYCL020W MIP1P15801 1254 aa6.22□□□□□ -1.41
YCL020WYCL020W FBP26P32604 452 aa6.22□□□□□ -1.41
YCL020WYCL020W BRE2P43132 505 aa6.22□□□□□ -1.41
YCL020WYCL020W MRX12P47084 519 aa6.22□□□□□ -1.41
YCL020WYCL020W ISU1Q03020 165 aa6.21□□□□□ -1.42
YCL020WYCL020W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
YCL020WYCL020W PTK2P47116 818 aaKnown RBP6.2□□□□□ -1.42
YCL020WYCL020W MSB3P48566 633 aaPredicted RBP6.2□□□□□ -1.42
YCL020WYCL020W YML083CQ04526 418 aa6.19□□□□□ -1.42
YCL020WYCL020W HDA3Q06623 655 aa6.19□□□□□ -1.42
YCL020WYCL020W STE6P12866 1290 aa6.18□□□□□ -1.42
YCL020WYCL020W DLD1P32891 587 aa6.18□□□□□ -1.42
YCL020WYCL020W TGL4P36165 910 aa6.18□□□□□ -1.42
YCL020WYCL020W BDS1Q08347 646 aa6.18□□□□□ -1.42
YCL020WYCL020W PDI1P17967 522 aaKnown RBP6.17□□□□□ -1.42
YCL020WYCL020W UTR2P32623 467 aa6.17□□□□□ -1.42
YCL020WYCL020W ATG3P40344 310 aa6.17□□□□□ -1.42
YCL020WYCL020W ECM23Q02710 187 aa6.17□□□□□ -1.42
YCL020WYCL020W DAT1P13483 248 aaKnown RBP6.16□□□□□ -1.42
YCL020WYCL020W PUP1P25043 261 aa6.16□□□□□ -1.42
YCL020WYCL020W GBP2P25555 427 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
YCL020WYCL020W AAD14P42884 376 aa6.16□□□□□ -1.42
YCL020WYCL020W UTP13Q05946 817 aaKnown RBP6.16□□□□□ -1.42
YCL020WYCL020W NOB1Q08444 459 aaKnown RBP6.16□□□□□ -1.42
YCL020WYCL020W WTM2Q12206 467 aa6.16□□□□□ -1.42
YCL020WYCL020W GAR1P28007 205 aaKnown RBP6.15□□□□□ -1.43
YCL020WYCL020W GCR2Q01722 534 aa6.15□□□□□ -1.43
YCL020WYCL020W SRF1Q12516 437 aa6.15□□□□□ -1.43
YCL020WYCL020W AIM9P40053 627 aaKnown RBP6.14□□□□□ -1.43
YCL020WYCL020W UTP7P40055 554 aaKnown RBP6.14□□□□□ -1.43
YCL020WYCL020W ACS2P52910 683 aaKnown RBP6.14□□□□□ -1.43
YCL020WYCL020W SUB2Q07478 446 aaKnown RBP6.14□□□□□ -1.43
YCL020WYCL020W SPT2P06843 333 aaPredicted RBP6.12□□□□□ -1.43
YCL020WYCL020W SSA4P22202 642 aaKnown RBP6.12□□□□□ -1.43
YCL020WYCL020W SLX8P40072 274 aa6.12□□□□□ -1.43
YCL020WYCL020W ARG82P07250 355 aa6.11□□□□□ -1.43
YCL020WYCL020W GAL2P13181 574 aa6.11□□□□□ -1.43
YCL020WYCL020W NTH2P35172 780 aa6.11□□□□□ -1.43
YCL020WYCL020W SWI5P08153 709 aa6.1□□□□□ -1.43
YCL020WYCL020W PHO87P25360 923 aa6.1□□□□□ -1.43
YCL020WYCL020W UBX7P38349 436 aa6.1□□□□□ -1.43
YCL020WYCL020W RPS6AP0CX37 236 aaKnown RBP6.09□□□□□ -1.43
YCL020WYCL020W RPS6BP0CX38 236 aaPredicted RBP6.09□□□□□ -1.43
YCL020WYCL020W MET22P32179 357 aa6.09□□□□□ -1.43
YCL020WYCL020W SIS2P36024 562 aa6.09□□□□□ -1.43
YCL020WYCL020W ROM1P53046 1155 aa6.09□□□□□ -1.43
YCL020WYCL020W TSC13Q99190 310 aa6.09□□□□□ -1.43
YCL020WYCL020W TBS1P38114 1094 aa6.08□□□□□ -1.44
YCL020WYCL020W DLD3P39976 496 aaKnown RBP6.08□□□□□ -1.44
YCL020WYCL020W NUP85P46673 744 aa6.08□□□□□ -1.44
YCL020WYCL020W YJR098CP47139 656 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms