RNA–Protein interactions for RNA: ENST00000641309.1

CASC19-221, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,382 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-221ENST00000641309 ERCC6L2Q5T890 1561 aa8.99□□□□□ -0.97
CASC19-221ENST00000641309 DDX27Q96GQ7 796 aaKnown RBP8.99□□□□□ -0.97
CASC19-221ENST00000641309 WDR97A6NE52 1622 aa8.98□□□□□ -0.97
CASC19-221ENST00000641309 NCKAP5LQ9HCH0 1330 aa8.98□□□□□ -0.97
CASC19-221ENST00000641309 DOK7Q18PE1 504 aa8.98□□□□□ -0.97
CASC19-221ENST00000641309 RIMBP2O15034 1052 aa8.97□□□□□ -0.97
CASC19-221ENST00000641309 PPP1R15BQ5SWA1 713 aa8.97□□□□□ -0.97
CASC19-221ENST00000641309 DSG2Q14126 1118 aa8.96□□□□□ -0.98
CASC19-221ENST00000641309 PLPP6Q8IY26 295 aa8.96□□□□□ -0.98
CASC19-221ENST00000641309 ZNF710Q8N1W2 664 aa8.95□□□□□ -0.98
CASC19-221ENST00000641309 MARVELD3Q96A59 401 aa8.95□□□□□ -0.98
CASC19-221ENST00000641309 MFSD10Q14728 455 aa8.94□□□□□ -0.98
CASC19-221ENST00000641309 VSIG10Q8N0Z9 540 aa8.94□□□□□ -0.98
CASC19-221ENST00000641309 ABCA5Q8WWZ7 1642 aa8.91□□□□□ -0.98
CASC19-221ENST00000641309 TBC1D12O60347 775 aa8.91□□□□□ -0.98
CASC19-221ENST00000641309 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
CASC19-221ENST00000641309 EMP3P54852 163 aa8.91□□□□□ -0.98
CASC19-221ENST00000641309 CEP170Q5SW79 1584 aa8.91□□□□□ -0.98
CASC19-221ENST00000641309 ABCA10Q8WWZ4 1543 aa8.91□□□□□ -0.98
CASC19-221ENST00000641309 GRIN2AQ12879 1464 aa8.91□□□□□ -0.98
CASC19-221ENST00000641309 SLC34A2O95436 690 aa8.9□□□□□ -0.98
CASC19-221ENST00000641309 ZSWIM6Q9HCJ5 1215 aa8.89□□□□□ -0.99
CASC19-221ENST00000641309 KDM2AQ9Y2K7 1162 aa8.89□□□□□ -0.99
CASC19-221ENST00000641309 KIF13AQ9H1H9 1805 aa8.89□□□□□ -0.99
CASC19-221ENST00000641309 WRNQ14191 1432 aaPredicted RBP eCLIP8.89□□□□□ -0.99
CASC19-221ENST00000641309 E2F4Q16254 413 aa8.88□□□□□ -0.99
CASC19-221ENST00000641309 HOXB3P14651 431 aaPredicted RBP8.87□□□□□ -0.99
CASC19-221ENST00000641309 FAM69CQ0P6D2 419 aa8.87□□□□□ -0.99
CASC19-221ENST00000641309 JPH4Q96JJ6 628 aa8.87□□□□□ -0.99
CASC19-221ENST00000641309 PRG4Q92954 1404 aaPredicted RBP8.87□□□□□ -0.99
CASC19-221ENST00000641309 TSPOAP1O95153 1857 aa8.87□□□□□ -0.99
CASC19-221ENST00000641309 ADAMTS12P58397 1594 aa8.87□□□□□ -0.99
CASC19-221ENST00000641309 PTCD2Q8WV60 388 aaKnown RBP8.86□□□□□ -0.99
CASC19-221ENST00000641309 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
CASC19-221ENST00000641309 FHAD1B1AJZ9 1412 aa8.84□□□□□ -0.99
CASC19-221ENST00000641309 NUP160Q12769 1436 aa8.84□□□□□ -0.99
CASC19-221ENST00000641309 P3H3Q8IVL6 736 aa8.84□□□□□ -0.99
CASC19-221ENST00000641309 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.99
CASC19-221ENST00000641309 HS3ST6Q96QI5 342 aa8.84□□□□□ -0.99
CASC19-221ENST00000641309 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
CASC19-221ENST00000641309 CAMK2BQ13554 666 aa8.83□□□□□ -1
CASC19-221ENST00000641309 PCDHGA4Q9Y5G9 962 aa8.83□□□□□ -1
CASC19-221ENST00000641309 TOP2BQ02880 1626 aa8.83□□□□□ -1
CASC19-221ENST00000641309 SHROOM2Q13796 1616 aa8.83□□□□□ -1
CASC19-221ENST00000641309 BIVM-ERCC5R4GMW8 1640 aa8.83□□□□□ -1
CASC19-221ENST00000641309 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
CASC19-221ENST00000641309 OXER1Q8TDS5 423 aa8.82□□□□□ -1
CASC19-221ENST00000641309 FAM205CA6NFA0 338 aa8.81□□□□□ -1
CASC19-221ENST00000641309 ARSIQ5FYB1 569 aa8.81□□□□□ -1
CASC19-221ENST00000641309 GPR153Q6NV75 609 aa8.81□□□□□ -1
CASC19-221ENST00000641309 BCANQ96GW7 911 aa8.8□□□□□ -1
CASC19-221ENST00000641309 ERICH3Q5RHP9 1530 aa8.79□□□□□ -1
CASC19-221ENST00000641309 KRTAP3-3Q9BYR6 98 aa8.79□□□□□ -1
CASC19-221ENST00000641309 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
CASC19-221ENST00000641309 KDM4FA0A1W2PPD8 638 aa8.78□□□□□ -1
CASC19-221ENST00000641309 EMILIN3Q9NT22 766 aa8.78□□□□□ -1
CASC19-221ENST00000641309 ARHGEF1Q92888 912 aaKnown RBP8.77□□□□□ -1.01
CASC19-221ENST00000641309 DPYSL4O14531 572 aa8.76□□□□□ -1.01
CASC19-221ENST00000641309 NUDT7P0C024 238 aa8.76□□□□□ -1.01
CASC19-221ENST00000641309 ARIH1Q9Y4X5 557 aaPredicted RBP8.76□□□□□ -1.01
CASC19-221ENST00000641309 ADCY10Q96PN6 1610 aa8.76□□□□□ -1.01
CASC19-221ENST00000641309 SPDYE16A6NNV3 312 aaPredicted RBP8.75□□□□□ -1.01
CASC19-221ENST00000641309 ABCC10Q5T3U5 1492 aa8.75□□□□□ -1.01
CASC19-221ENST00000641309 KDM6BO15054 1643 aa8.75□□□□□ -1.01
CASC19-221ENST00000641309 DIP2BQ9P265 1576 aa8.75□□□□□ -1.01
CASC19-221ENST00000641309 RUSC2Q8N2Y8 1516 aa8.74□□□□□ -1.01
CASC19-221ENST00000641309 ERBB3P21860 1342 aa8.74□□□□□ -1.01
CASC19-221ENST00000641309 POTEB3A0JP26 581 aa8.74□□□□□ -1.01
CASC19-221ENST00000641309 EVI5O60447 810 aa8.74□□□□□ -1.01
CASC19-221ENST00000641309 POTEBQ6S5H4 581 aa8.74□□□□□ -1.01
CASC19-221ENST00000641309 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
CASC19-221ENST00000641309 KHSRPQ92945 711 aaKnown RBP eCLIP8.74□□□□□ -1.012e-6■□□□□ 9.6
CASC19-221ENST00000641309 PSDA5PKW4 1024 aaPredicted RBP8.73□□□□□ -1.01
CASC19-221ENST00000641309 ANO8Q9HCE9 1232 aaPredicted RBP8.72□□□□□ -1.01
CASC19-221ENST00000641309 IGF1RP08069 1367 aa8.71□□□□□ -1.02
CASC19-221ENST00000641309 PTPRGP23470 1445 aa8.7□□□□□ -1.02
CASC19-221ENST00000641309 LHX6Q9UPM6 363 aa8.7□□□□□ -1.02
CASC19-221ENST00000641309 MAPKBP1O60336 1514 aa8.69□□□□□ -1.02
CASC19-221ENST00000641309 KIAA0586Q9BVV6 1533 aa8.69□□□□□ -1.02
CASC19-221ENST00000641309 PDIA6Q15084 440 aa8.69□□□□□ -1.02
CASC19-221ENST00000641309 TPRNQ4KMQ1 711 aa8.69□□□□□ -1.02
CASC19-221ENST00000641309 CUL7Q14999 1698 aa8.68□□□□□ -1.02
CASC19-221ENST00000641309 VARS2Q5ST30 1063 aaKnown RBP8.67□□□□□ -1.02
CASC19-221ENST00000641309 CARMIL1Q5VZK9 1371 aa8.67□□□□□ -1.02
CASC19-221ENST00000641309 KIF27Q86VH2 1401 aa8.66□□□□□ -1.02
CASC19-221ENST00000641309 PTGER2P43116 358 aa8.66□□□□□ -1.02
CASC19-221ENST00000641309 PPP4R3BQ5MIZ7 849 aa8.66□□□□□ -1.02
CASC19-221ENST00000641309 ASXL2Q76L83 1435 aa8.65□□□□□ -1.02
CASC19-221ENST00000641309 ZNF454Q8N9F8 522 aa8.65□□□□□ -1.02
CASC19-221ENST00000641309 RNF166Q96A37 237 aaPredicted RBP8.65□□□□□ -1.02
CASC19-221ENST00000641309 KCNH8Q96L42 1107 aa8.65□□□□□ -1.02
CASC19-221ENST00000641309 EPAS1Q99814 870 aa8.64□□□□□ -1.03
CASC19-221ENST00000641309 CARMIL2Q6F5E8 1435 aa8.64□□□□□ -1.03
CASC19-221ENST00000641309 PHF14O94880 888 aa8.63□□□□□ -1.03
CASC19-221ENST00000641309 NBR1Q14596 966 aa8.63□□□□□ -1.03
CASC19-221ENST00000641309 SMYD5Q6GMV2 418 aa8.63□□□□□ -1.03
CASC19-221ENST00000641309 TNIKQ9UKE5 1360 aa8.63□□□□□ -1.03
CASC19-221ENST00000641309 PPRC1Q5VV67 1664 aaKnown RBP8.63□□□□□ -1.03
CASC19-221ENST00000641309 ADGRL1O94910 1474 aa8.62□□□□□ -1.03
CASC19-221ENST00000641309 GRXCR2A6NFK2 248 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms