RNA–Protein interactions for RNA: ENST00000640521.1

MED17-227, Transcript of mediator complex subunit 17, human

TSL 5 BASIC

Gene MED17, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-227	ENST00000640521	CNTLN	Q9NXG0	1405 aa		33.02	■■■□□ 2.88
MED17-227	ENST00000640521	CCDC144A	A2RUR9	1427 aa		33.02	■■■□□ 2.88
MED17-227	ENST00000640521	INO80	Q9ULG1	1556 aa	Predicted RBP	33.01	■■■□□ 2.87
MED17-227	ENST00000640521	KDM5C	P41229	1560 aa		33	■■■□□ 2.87
MED17-227	ENST00000640521	USP47	Q96K76	1375 aa		32.98	■■■□□ 2.87
MED17-227	ENST00000640521	NPM1	P06748	294 aa	Known RBP eCLIP	32.98	■■■□□ 2.87
MED17-227	ENST00000640521	ADGRL1	O94910	1474 aa		32.98	■■■□□ 2.87
MED17-227	ENST00000640521	ATP7A	Q04656	1500 aa		32.97	■■■□□ 2.87
MED17-227	ENST00000640521	ATP10A	O60312	1499 aa		32.97	■■■□□ 2.87
MED17-227	ENST00000640521	SCAPER	Q9BY12	1400 aa		32.95	■■■□□ 2.87
MED17-227	ENST00000640521	KIF7	Q2M1P5	1343 aa		32.95	■■■□□ 2.86
MED17-227	ENST00000640521	DCAF11	Q8TEB1	546 aa		32.94	■■■□□ 2.86
MED17-227	ENST00000640521	DEPDC5	O75140	1603 aa		32.93	■■■□□ 2.86
MED17-227	ENST00000640521	KDM2A	Q9Y2K7	1162 aa		32.92	■■■□□ 2.86
MED17-227	ENST00000640521	BCORL1	Q5H9F3	1711 aa		32.92	■■■□□ 2.86
MED17-227	ENST00000640521		E9PCH4	1651 aa		32.86	■■■□□ 2.85
MED17-227	ENST00000640521	CARD11	Q9BXL7	1154 aa		32.85	■■■□□ 2.85
MED17-227	ENST00000640521	A2M	P01023	1474 aa		32.85	■■■□□ 2.85
MED17-227	ENST00000640521	PRAG1	Q86YV5	1406 aa		32.84	■■■□□ 2.85
MED17-227	ENST00000640521	TRPM1	Q7Z4N2	1603 aa		32.84	■■■□□ 2.85
MED17-227	ENST00000640521	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.82	■■■□□ 2.84
MED17-227	ENST00000640521	CFAP74	Q9C0B2	1584 aa		32.81	■■■□□ 2.84
MED17-227	ENST00000640521	VWDE	Q8N2E2	1590 aa		32.8	■■■□□ 2.84
MED17-227	ENST00000640521	KIDINS220	Q9ULH0	1771 aa		32.8	■■■□□ 2.84
MED17-227	ENST00000640521	CD109	Q6YHK3	1445 aa		32.8	■■■□□ 2.84
MED17-227	ENST00000640521	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.8	■■■□□ 2.84
MED17-227	ENST00000640521	DHX29	Q7Z478	1369 aa	Known RBP	32.79	■■■□□ 2.84
MED17-227	ENST00000640521	RGL3	Q3MIN7	710 aa		32.79	■■■□□ 2.84
MED17-227	ENST00000640521	TET3	O43151	1660 aa		32.78	■■■□□ 2.84
MED17-227	ENST00000640521	ZNF518A	Q6AHZ1	1483 aa		32.76	■■■□□ 2.84
MED17-227	ENST00000640521	ROCK2	O75116	1388 aa	Known RBP	32.75	■■■□□ 2.83
MED17-227	ENST00000640521	TRPM2	O94759	1503 aa		32.74	■■■□□ 2.83
MED17-227	ENST00000640521	SPHKAP	Q2M3C7	1700 aa		32.74	■■■□□ 2.83
MED17-227	ENST00000640521	MYT1L	Q9UL68	1186 aa		32.73	■■■□□ 2.83
MED17-227	ENST00000640521	MROH1	Q8NDA8	1641 aa		32.73	■■■□□ 2.83
MED17-227	ENST00000640521	PTPRT	O14522	1441 aa		32.73	■■■□□ 2.83
MED17-227	ENST00000640521	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.73	■■■□□ 2.83
MED17-227	ENST00000640521	PRDM15	P57071	1507 aa	Predicted RBP	32.73	■■■□□ 2.83
MED17-227	ENST00000640521	KANK1	Q14678	1352 aa		32.72	■■■□□ 2.83
MED17-227	ENST00000640521	LAMC1	P11047	1609 aa		32.7	■■■□□ 2.83
MED17-227	ENST00000640521	KIF3B	O15066	747 aa		32.7	■■■□□ 2.83
MED17-227	ENST00000640521	GPRASP1	Q5JY77	1395 aa		32.7	■■■□□ 2.82
MED17-227	ENST00000640521	ST20-MTHFS	A0A0A6YYL1	179 aa		32.68	■■■□□ 2.82
MED17-227	ENST00000640521	POGZ	Q7Z3K3	1410 aa		32.68	■■■□□ 2.82
MED17-227	ENST00000640521	CEP152	O94986	1710 aa		32.67	■■■□□ 2.82
MED17-227	ENST00000640521	PELP1	Q8IZL8	1130 aa	Known RBP	32.64	■■■□□ 2.82
MED17-227	ENST00000640521	CLTCL1	P53675	1640 aa		32.64	■■■□□ 2.82
MED17-227	ENST00000640521	MLH3	Q9UHC1	1453 aa		32.63	■■■□□ 2.81
MED17-227	ENST00000640521	NBPF1	Q3BBV0	1214 aa		32.63	■■■□□ 2.81
MED17-227	ENST00000640521	POLR3GL	Q9BT43	218 aa		32.6	■■■□□ 2.81
MED17-227	ENST00000640521	NEO1	Q92859	1461 aa		32.6	■■■□□ 2.81
MED17-227	ENST00000640521	RNF17	Q9BXT8	1623 aa	Known RBP	32.59	■■■□□ 2.81
MED17-227	ENST00000640521	HECW2	Q9P2P5	1572 aa		32.59	■■■□□ 2.81
MED17-227	ENST00000640521	CCDC184	Q52MB2	194 aa		32.58	■■■□□ 2.81
MED17-227	ENST00000640521	EFCAB6	Q5THR3	1501 aa		32.55	■■■□□ 2.8
MED17-227	ENST00000640521	LMTK2	Q8IWU2	1503 aa		32.55	■■■□□ 2.8
MED17-227	ENST00000640521	MADD	Q8WXG6	1647 aa		32.55	■■■□□ 2.8
MED17-227	ENST00000640521	FRMPD1	Q5SYB0	1578 aa		32.54	■■■□□ 2.8
MED17-227	ENST00000640521	NEURL4	Q96JN8	1562 aa		32.53	■■■□□ 2.8
MED17-227	ENST00000640521	PPRC1	Q5VV67	1664 aa	Known RBP	32.51	■■■□□ 2.8
MED17-227	ENST00000640521	MAP3K4	Q9Y6R4	1608 aa		32.51	■■■□□ 2.8
MED17-227	ENST00000640521	ABCA6	Q8N139	1617 aa		32.5	■■■□□ 2.79
MED17-227	ENST00000640521	STAC3	Q96MF2	364 aa		32.5	■■■□□ 2.79
MED17-227	ENST00000640521	RIMBP3C	A6NJZ7	1639 aa		32.48	■■■□□ 2.79
MED17-227	ENST00000640521	RIMBP3B	A6NNM3	1639 aa		32.48	■■■□□ 2.79
MED17-227	ENST00000640521	RIMBP3	Q9UFD9	1639 aa		32.48	■■■□□ 2.79
MED17-227	ENST00000640521	MRS2	Q9HD23	443 aa		32.47	■■■□□ 2.79
MED17-227	ENST00000640521	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.47	■■■□□ 2.79
MED17-227	ENST00000640521	CYB5RL	Q6IPT4	315 aa		32.46	■■■□□ 2.79
MED17-227	ENST00000640521	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.45	■■■□□ 2.79
MED17-227	ENST00000640521	GLI2	P10070	1586 aa		32.45	■■■□□ 2.78
MED17-227	ENST00000640521	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.43	■■■□□ 2.78
MED17-227	ENST00000640521	TESK2	Q96S53	571 aa		32.43	■■■□□ 2.78
MED17-227	ENST00000640521	UGGT1	Q9NYU2	1555 aa		32.42	■■■□□ 2.78
MED17-227	ENST00000640521	KIF1B	O60333	1816 aa		32.41	■■■□□ 2.78
MED17-227	ENST00000640521	RICTOR	Q6R327	1708 aa		32.41	■■■□□ 2.78
MED17-227	ENST00000640521	RAPGEF3	O95398	923 aa		32.4	■■■□□ 2.78
MED17-227	ENST00000640521	IQGAP1	P46940	1657 aa		32.4	■■■□□ 2.78
MED17-227	ENST00000640521	DIP2C	Q9Y2E4	1556 aa		32.37	■■■□□ 2.77
MED17-227	ENST00000640521	KIAA1210	Q9ULL0	1709 aa		32.36	■■■□□ 2.77
MED17-227	ENST00000640521	DISP3	Q9P2K9	1392 aa		32.35	■■■□□ 2.77
MED17-227	ENST00000640521	FAM9B	Q8IZU0	186 aa		32.35	■■■□□ 2.77
MED17-227	ENST00000640521	IFT172	Q9UG01	1749 aa		32.34	■■■□□ 2.77
MED17-227	ENST00000640521	MROH2A	A6NES4	1674 aa		32.33	■■■□□ 2.77
MED17-227	ENST00000640521	MYOM2	P54296	1465 aa		32.32	■■■□□ 2.76
MED17-227	ENST00000640521	GGT6	Q6P531	493 aa		32.32	■■■□□ 2.76
MED17-227	ENST00000640521	ABCC3	O15438	1527 aa		32.32	■■■□□ 2.76
MED17-227	ENST00000640521	NPAT	Q14207	1427 aa		32.31	■■■□□ 2.76
MED17-227	ENST00000640521	KTN1	Q86UP2	1357 aa	Known RBP	32.29	■■■□□ 2.76
MED17-227	ENST00000640521	CNGB1	Q14028	1251 aa	Predicted RBP	32.29	■■■□□ 2.76
MED17-227	ENST00000640521	SCAF11	Q99590	1463 aa	Known RBP	32.29	■■■□□ 2.76
MED17-227	ENST00000640521	TMF1	P82094	1093 aa		32.28	■■■□□ 2.76
MED17-227	ENST00000640521	ADGRB3	O60242	1522 aa		32.27	■■■□□ 2.76
MED17-227	ENST00000640521	DIP2B	Q9P265	1576 aa		32.26	■■■□□ 2.76
MED17-227	ENST00000640521	CAMSAP1	Q5T5Y3	1602 aa		32.25	■■■□□ 2.75
MED17-227	ENST00000640521	RALBP1	Q15311	655 aa		32.24	■■■□□ 2.75
MED17-227	ENST00000640521	WASHC2C	Q9Y4E1	1318 aa		32.23	■■■□□ 2.75
MED17-227	ENST00000640521	CFAP65	Q6ZU64	1925 aa	Known RBP	32.22	■■■□□ 2.75
MED17-227	ENST00000640521	PER1	O15534	1290 aa	Predicted RBP	32.22	■■■□□ 2.75
MED17-227	ENST00000640521	NRXN1	Q9ULB1	1477 aa		32.21	■■■□□ 2.75

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