RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 DMRT2Q9Y5R5 561 aa24.46■■□□□ 1.51
SPIN3-240ENST00000640507 KIF15Q9NS87 1388 aa24.45■■□□□ 1.5
SPIN3-240ENST00000640507 KDM5DQ9BY66 1539 aa24.45■■□□□ 1.5
SPIN3-240ENST00000640507 DUOX2Q9NRD8 1548 aa24.45■■□□□ 1.5
SPIN3-240ENST00000640507 DNMT1P26358 1616 aaKnown RBP24.44■■□□□ 1.5
SPIN3-240ENST00000640507 FAM50AQ14320 339 aaKnown RBP24.43■■□□□ 1.5
SPIN3-240ENST00000640507 FBXO31Q5XUX0 539 aaPredicted RBP24.42■■□□□ 1.5
SPIN3-240ENST00000640507 ILDR1Q86SU0 546 aaPredicted RBP24.42■■□□□ 1.5
SPIN3-240ENST00000640507 CHIC2Q9UKJ5 165 aa24.42■■□□□ 1.5
SPIN3-240ENST00000640507 EIF2AK4Q9P2K8 1649 aaKnown RBP24.41■■□□□ 1.5
SPIN3-240ENST00000640507 ANKRD30AQ9BXX3 1397 aa24.4■■□□□ 1.5
SPIN3-240ENST00000640507 CROCC2H7BZ55 1655 aa24.4■■□□□ 1.5
SPIN3-240ENST00000640507 PZPP20742 1482 aa24.39■■□□□ 1.5
SPIN3-240ENST00000640507 RNF17Q9BXT8 1623 aaKnown RBP24.39■■□□□ 1.49
SPIN3-240ENST00000640507 ERBINQ96RT1 1412 aa24.38■■□□□ 1.49
SPIN3-240ENST00000640507 NCOA1Q15788 1441 aa24.38■■□□□ 1.49
SPIN3-240ENST00000640507 STRCQ7RTU9 1775 aa24.36■■□□□ 1.49
SPIN3-240ENST00000640507 TNRQ92752 1358 aa24.35■■□□□ 1.49
SPIN3-240ENST00000640507 PTPRTO14522 1441 aa24.34■■□□□ 1.49
SPIN3-240ENST00000640507 ABCC3O15438 1527 aa24.33■■□□□ 1.49
SPIN3-240ENST00000640507 MYO3AQ8NEV4 1616 aa24.33■■□□□ 1.49
SPIN3-240ENST00000640507 PPARGC1BQ86YN6 1023 aaKnown RBP24.33■■□□□ 1.49
SPIN3-240ENST00000640507 MROH1Q8NDA8 1641 aa24.33■■□□□ 1.48
SPIN3-240ENST00000640507 CEP170BQ9Y4F5 1589 aaPredicted RBP24.32■■□□□ 1.48
SPIN3-240ENST00000640507 CAMSAP1Q5T5Y3 1602 aa24.32■■□□□ 1.48
SPIN3-240ENST00000640507 ADGRL2O95490 1459 aa24.32■■□□□ 1.48
SPIN3-240ENST00000640507 A2ML1A8K2U0 1454 aa24.31■■□□□ 1.48
SPIN3-240ENST00000640507 ZNF142P52746 1687 aaPredicted RBP24.29■■□□□ 1.48
SPIN3-240ENST00000640507 PKD2Q13563 968 aa24.29■■□□□ 1.48
SPIN3-240ENST00000640507 FBXO41Q8TF61 875 aa24.29■■□□□ 1.48
SPIN3-240ENST00000640507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.29■■□□□ 1.48
SPIN3-240ENST00000640507 ZC3H13Q5T200 1668 aaKnown RBP24.29■■□□□ 1.48
SPIN3-240ENST00000640507 PLA2R1Q13018 1463 aa24.29■■□□□ 1.48
SPIN3-240ENST00000640507 NCKAP5LQ9HCH0 1330 aa24.28■■□□□ 1.48
SPIN3-240ENST00000640507 PRDM15P57071 1507 aaPredicted RBP24.26■■□□□ 1.47
SPIN3-240ENST00000640507 KANK1Q14678 1352 aa24.26■■□□□ 1.47
SPIN3-240ENST00000640507 CERKQ8TCT0 537 aa24.26■■□□□ 1.47
SPIN3-240ENST00000640507 NLRP1Q9C000 1473 aa24.25■■□□□ 1.47
SPIN3-240ENST00000640507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.24■■□□□ 1.47
SPIN3-240ENST00000640507 ARHGAP31Q2M1Z3 1444 aa24.24■■□□□ 1.47
SPIN3-240ENST00000640507 THEMISQ8N1K5 641 aaPredicted RBP24.24■■□□□ 1.47
SPIN3-240ENST00000640507 SPATA31D1Q6ZQQ2 1576 aa24.22■■□□□ 1.47
SPIN3-240ENST00000640507 ANKRD50Q9ULJ7 1429 aa24.22■■□□□ 1.47
SPIN3-240ENST00000640507 ERVK-7P63135 1459 aa24.22■■□□□ 1.47
SPIN3-240ENST00000640507 DEPDC5O75140 1603 aa24.21■■□□□ 1.47
SPIN3-240ENST00000640507 ROCK1Q13464 1354 aa24.19■■□□□ 1.46
SPIN3-240ENST00000640507 CEP152O94986 1710 aa24.19■■□□□ 1.46
SPIN3-240ENST00000640507 UGGT1Q9NYU2 1555 aa24.17■■□□□ 1.46
SPIN3-240ENST00000640507 LMTK2Q8IWU2 1503 aa24.17■■□□□ 1.46
SPIN3-240ENST00000640507 ITGAEP38570 1179 aa24.16■■□□□ 1.46
SPIN3-240ENST00000640507 ANKLE2Q86XL3 938 aa24.16■■□□□ 1.46
SPIN3-240ENST00000640507 VWDEQ8N2E2 1590 aa24.16■■□□□ 1.46
SPIN3-240ENST00000640507 RRBP1Q9P2E9 1410 aaKnown RBP24.11■■□□□ 1.45
SPIN3-240ENST00000640507 LTBP4Q8N2S1 1624 aa24.09■■□□□ 1.45
SPIN3-240ENST00000640507 ZNF335Q9H4Z2 1342 aaPredicted RBP24.08■■□□□ 1.45
SPIN3-240ENST00000640507 CFAP65Q6ZU64 1925 aaKnown RBP24.07■■□□□ 1.44
SPIN3-240ENST00000640507 IDI1Q13907 227 aa24.05■■□□□ 1.44
SPIN3-240ENST00000640507 EFCAB6Q5THR3 1501 aa24.04■■□□□ 1.44
SPIN3-240ENST00000640507 NOS1P29475 1434 aa24.04■■□□□ 1.44
SPIN3-240ENST00000640507 NEURL4Q96JN8 1562 aa24.04■■□□□ 1.44
SPIN3-240ENST00000640507 MED14O60244 1454 aa24.04■■□□□ 1.44
SPIN3-240ENST00000640507 SLC52A1Q9NWF4 448 aa24.02■■□□□ 1.44
SPIN3-240ENST00000640507 NPHP4O75161 1426 aaPredicted RBP24.02■■□□□ 1.44
SPIN3-240ENST00000640507 STAG3Q9UJ98 1225 aa24.01■■□□□ 1.43
SPIN3-240ENST00000640507 RPRD2Q5VT52 1461 aaKnown RBP24.01■■□□□ 1.43
SPIN3-240ENST00000640507 POLR1AO95602 1720 aaPredicted RBP24.01■■□□□ 1.43
SPIN3-240ENST00000640507 UNC13BO14795 1591 aa24■■□□□ 1.43
SPIN3-240ENST00000640507 UBR1Q8IWV7 1749 aa23.99■■□□□ 1.43
SPIN3-240ENST00000640507 IQSEC2Q5JU85 1478 aa23.99■■□□□ 1.43
SPIN3-240ENST00000640507 TXNDC2Q86VQ3 553 aa23.99■■□□□ 1.43
SPIN3-240ENST00000640507 NUP155O75694 1391 aa23.99■■□□□ 1.43
SPIN3-240ENST00000640507 LTKP29376 864 aa23.98■■□□□ 1.43
SPIN3-240ENST00000640507 ARHGAP23Q9P227 1491 aa23.98■■□□□ 1.43
SPIN3-240ENST00000640507 EID1Q9Y6B2 187 aa23.97■■□□□ 1.43
SPIN3-240ENST00000640507 SLIT1O75093 1534 aa23.97■■□□□ 1.43
SPIN3-240ENST00000640507 SYNMO15061 1565 aa23.96■■□□□ 1.43
SPIN3-240ENST00000640507 TET3O43151 1660 aa23.95■■□□□ 1.43
SPIN3-240ENST00000640507 TMEM2Q9UHN6 1383 aa23.95■■□□□ 1.42
SPIN3-240ENST00000640507 PIK3C2BO00750 1634 aa23.95■■□□□ 1.42
SPIN3-240ENST00000640507 SCAF11Q99590 1463 aaKnown RBP23.95■■□□□ 1.42
SPIN3-240ENST00000640507 KDM5AP29375 1690 aaKnown RBP23.91■■□□□ 1.42
SPIN3-240ENST00000640507 NAIPQ13075 1403 aa23.9■■□□□ 1.42
SPIN3-240ENST00000640507 IQGAP3Q86VI3 1631 aa23.9■■□□□ 1.42
SPIN3-240ENST00000640507 IQGAP1P46940 1657 aa23.89■■□□□ 1.42
SPIN3-240ENST00000640507 GCC2Q8IWJ2 1684 aa23.89■■□□□ 1.42
SPIN3-240ENST00000640507 CPS1P31327 1500 aa23.89■■□□□ 1.41
SPIN3-240ENST00000640507 ADGRB3O60242 1522 aa23.86■■□□□ 1.41
SPIN3-240ENST00000640507 E9PCH4 1651 aa23.85■■□□□ 1.41
SPIN3-240ENST00000640507 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
SPIN3-240ENST00000640507 UBAP1LF5GYI3 381 aa23.84■■□□□ 1.41
SPIN3-240ENST00000640507 HDGFP51858 240 aaKnown RBP23.84■■□□□ 1.41
SPIN3-240ENST00000640507 CHGAP10645 457 aaKnown RBP23.8■■□□□ 1.4
SPIN3-240ENST00000640507 TRIM52Q96A61 297 aa23.77■■□□□ 1.4
SPIN3-240ENST00000640507 TMEM131LA2VDJ0 1609 aa23.77■■□□□ 1.4
SPIN3-240ENST00000640507 ZFYVE9O95405 1425 aa23.77■■□□□ 1.4
SPIN3-240ENST00000640507 TOM1O60784 492 aa23.76■■□□□ 1.39
SPIN3-240ENST00000640507 RIMS2Q9UQ26 1411 aa23.76■■□□□ 1.39
SPIN3-240ENST00000640507 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.76■■□□□ 1.39
SPIN3-240ENST00000640507 SLC26A8Q96RN1 970 aa23.76■■□□□ 1.39
SPIN3-240ENST00000640507 BCANQ96GW7 911 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms