RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 CDC42BPBQ9Y5S2 1711 aa18.86■□□□□ 0.61
SPIN3-239ENST00000640463 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
SPIN3-239ENST00000640463 CCDC141Q6ZP82 1450 aa18.85■□□□□ 0.61
SPIN3-239ENST00000640463 FAM135AQ9P2D6 1515 aa18.85■□□□□ 0.61
SPIN3-239ENST00000640463 SALL2Q9Y467 1007 aaPredicted RBP18.85■□□□□ 0.61
SPIN3-239ENST00000640463 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
SPIN3-239ENST00000640463 PRKCSHP14314 528 aaPredicted RBP18.83■□□□□ 0.61
SPIN3-239ENST00000640463 CCDC144AA2RUR9 1427 aa18.81■□□□□ 0.6
SPIN3-239ENST00000640463 MYBBP1AQ9BQG0 1328 aaKnown RBP18.81■□□□□ 0.6
SPIN3-239ENST00000640463 SYCP2Q9BX26 1530 aa18.81■□□□□ 0.6
SPIN3-239ENST00000640463 ERICH6Q7L0X2 663 aa18.81■□□□□ 0.6
SPIN3-239ENST00000640463 BCL11AQ9H165 835 aa18.8■□□□□ 0.6
SPIN3-239ENST00000640463 PREX2Q70Z35 1606 aa18.8■□□□□ 0.6
SPIN3-239ENST00000640463 CCDC136Q96JN2 1154 aa18.8■□□□□ 0.6
SPIN3-239ENST00000640463 PRAG1Q86YV5 1406 aa18.79■□□□□ 0.6
SPIN3-239ENST00000640463 ARHGAP5Q13017 1502 aa18.79■□□□□ 0.6
SPIN3-239ENST00000640463 RALBP1Q15311 655 aa18.78■□□□□ 0.6
SPIN3-239ENST00000640463 RNF123Q5XPI4 1314 aa18.78■□□□□ 0.6
SPIN3-239ENST00000640463 TTC37Q6PGP7 1564 aa18.77■□□□□ 0.6
SPIN3-239ENST00000640463 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
SPIN3-239ENST00000640463 RSPH4AQ5TD94 716 aa18.77■□□□□ 0.6
SPIN3-239ENST00000640463 PLA2R1Q13018 1463 aa18.77■□□□□ 0.59
SPIN3-239ENST00000640463 LRPPRCP42704 1394 aaKnown RBP18.77■□□□□ 0.59
SPIN3-239ENST00000640463 TRPM1Q7Z4N2 1603 aa18.75■□□□□ 0.59
SPIN3-239ENST00000640463 E9PCH4 1651 aa18.75■□□□□ 0.59
SPIN3-239ENST00000640463 PLEKHH2Q8IVE3 1493 aa18.74■□□□□ 0.59
SPIN3-239ENST00000640463 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
SPIN3-239ENST00000640463 A2MP01023 1474 aa18.73■□□□□ 0.59
SPIN3-239ENST00000640463 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.73■□□□□ 0.59
SPIN3-239ENST00000640463 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
SPIN3-239ENST00000640463 CHD1O14646 1710 aa18.72■□□□□ 0.59
SPIN3-239ENST00000640463 DISP3Q9P2K9 1392 aa18.71■□□□□ 0.59
SPIN3-239ENST00000640463 PER1O15534 1290 aaPredicted RBP18.71■□□□□ 0.59
SPIN3-239ENST00000640463 NLRP13Q86W25 1043 aa18.71■□□□□ 0.59
SPIN3-239ENST00000640463 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
SPIN3-239ENST00000640463 TESK2Q96S53 571 aa18.69■□□□□ 0.58
SPIN3-239ENST00000640463 PARD3Q8TEW0 1356 aa18.69■□□□□ 0.58
SPIN3-239ENST00000640463 PANK3Q9H999 370 aa18.68■□□□□ 0.58
SPIN3-239ENST00000640463 UNC13BO14795 1591 aa18.68■□□□□ 0.58
SPIN3-239ENST00000640463 CDCA7LQ96GN5 454 aa18.67■□□□□ 0.58
SPIN3-239ENST00000640463 RRP1P56182 461 aaKnown RBP18.66■□□□□ 0.58
SPIN3-239ENST00000640463 EXOC6Q8TAG9 804 aa18.66■□□□□ 0.58
SPIN3-239ENST00000640463 MYO5CQ9NQX4 1742 aa18.66■□□□□ 0.58
SPIN3-239ENST00000640463 RCAN3Q9UKA8 241 aa18.65■□□□□ 0.58
SPIN3-239ENST00000640463 GPRASP1Q5JY77 1395 aa18.65■□□□□ 0.58
SPIN3-239ENST00000640463 MAST1Q9Y2H9 1570 aa18.65■□□□□ 0.58
SPIN3-239ENST00000640463 COL17A1Q9UMD9 1497 aaPredicted RBP18.64■□□□□ 0.57
SPIN3-239ENST00000640463 ERBINQ96RT1 1412 aa18.63■□□□□ 0.57
SPIN3-239ENST00000640463 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
SPIN3-239ENST00000640463 PRDM15P57071 1507 aaPredicted RBP18.62■□□□□ 0.57
SPIN3-239ENST00000640463 PAK3O75914 559 aaPredicted RBP18.61■□□□□ 0.57
SPIN3-239ENST00000640463 TMF1P82094 1093 aa18.61■□□□□ 0.57
SPIN3-239ENST00000640463 ABCC2Q92887 1545 aa18.61■□□□□ 0.57
SPIN3-239ENST00000640463 PLXNC1O60486 1568 aa18.6■□□□□ 0.57
SPIN3-239ENST00000640463 DUOX2Q9NRD8 1548 aa18.59■□□□□ 0.57
SPIN3-239ENST00000640463 SHROOM2Q13796 1616 aa18.59■□□□□ 0.57
SPIN3-239ENST00000640463 PLIN1O60240 522 aa18.58■□□□□ 0.57
SPIN3-239ENST00000640463 NOP58Q9Y2X3 529 aaKnown RBP18.58■□□□□ 0.57
SPIN3-239ENST00000640463 TRAPPC8Q9Y2L5 1435 aa18.58■□□□□ 0.57
SPIN3-239ENST00000640463 EFCAB2Q5VUJ9 269 aa18.58■□□□□ 0.56
SPIN3-239ENST00000640463 AFAP1Q8N556 730 aa18.57■□□□□ 0.56
SPIN3-239ENST00000640463 PLCH2O75038 1416 aa18.56■□□□□ 0.56
SPIN3-239ENST00000640463 PDE3BQ13370 1112 aa18.56■□□□□ 0.56
SPIN3-239ENST00000640463 LAMC1P11047 1609 aa18.55■□□□□ 0.56
SPIN3-239ENST00000640463 EIF2AK4Q9P2K8 1649 aaKnown RBP18.55■□□□□ 0.56
SPIN3-239ENST00000640463 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
SPIN3-239ENST00000640463 MAGI2Q86UL8 1455 aa18.53■□□□□ 0.56
SPIN3-239ENST00000640463 NBR1Q14596 966 aa18.53■□□□□ 0.56
SPIN3-239ENST00000640463 ATP10AO60312 1499 aa18.53■□□□□ 0.56
SPIN3-239ENST00000640463 ANP32AP39687 249 aaKnown RBP18.53■□□□□ 0.56
SPIN3-239ENST00000640463 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
SPIN3-239ENST00000640463 SPAG9O60271 1321 aaKnown RBP18.52■□□□□ 0.56
SPIN3-239ENST00000640463 ZCCHC11Q5TAX3 1644 aaKnown RBP18.52■□□□□ 0.56
SPIN3-239ENST00000640463 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
SPIN3-239ENST00000640463 KNSTRNQ9Y448 316 aa18.5■□□□□ 0.55
SPIN3-239ENST00000640463 BLMP54132 1417 aaPredicted RBP18.5■□□□□ 0.55
SPIN3-239ENST00000640463 ABCC1P33527 1531 aa18.5■□□□□ 0.55
SPIN3-239ENST00000640463 SKAP1Q86WV1 359 aa18.49■□□□□ 0.55
SPIN3-239ENST00000640463 IPO9Q96P70 1041 aaKnown RBP18.49■□□□□ 0.55
SPIN3-239ENST00000640463 MYT1LQ9UL68 1186 aa18.49■□□□□ 0.55
SPIN3-239ENST00000640463 RNF17Q9BXT8 1623 aaKnown RBP18.48■□□□□ 0.55
SPIN3-239ENST00000640463 WDR7Q9Y4E6 1490 aa18.48■□□□□ 0.55
SPIN3-239ENST00000640463 PPP2R1AP30153 589 aa18.47■□□□□ 0.55
SPIN3-239ENST00000640463 CRBNQ96SW2 442 aa18.47■□□□□ 0.55
SPIN3-239ENST00000640463 MADDQ8WXG6 1647 aa18.46■□□□□ 0.55
SPIN3-239ENST00000640463 C20orf194Q5TEA3 1177 aa18.45■□□□□ 0.54
SPIN3-239ENST00000640463 ZBTB47Q9UFB7 747 aaPredicted RBP18.45■□□□□ 0.54
SPIN3-239ENST00000640463 AMER1Q5JTC6 1135 aaPredicted RBP18.44■□□□□ 0.54
SPIN3-239ENST00000640463 WDR43Q15061 677 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPIN3-239ENST00000640463 TCERG1O14776 1098 aaKnown RBP18.43■□□□□ 0.54
SPIN3-239ENST00000640463 PDE4AP27815 886 aa18.43■□□□□ 0.54
SPIN3-239ENST00000640463 ZMYM4Q5VZL5 1548 aa18.42■□□□□ 0.54
SPIN3-239ENST00000640463 KIF3BO15066 747 aa18.42■□□□□ 0.54
SPIN3-239ENST00000640463 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
SPIN3-239ENST00000640463 CLTCL1P53675 1640 aa18.42■□□□□ 0.54
SPIN3-239ENST00000640463 IQGAP1P46940 1657 aa18.42■□□□□ 0.54
SPIN3-239ENST00000640463 TRPM2O94759 1503 aa18.4■□□□□ 0.54
SPIN3-239ENST00000640463 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
SPIN3-239ENST00000640463 ZFYVE16Q7Z3T8 1539 aa18.4■□□□□ 0.54
SPIN3-239ENST00000640463 SCAF11Q99590 1463 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms