RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 RALGAPBQ86X10 1494 aa22.24■■□□□ 1.15
HNRNPU-228ENST00000640306 ARID4BQ4LE39 1312 aaPredicted RBP22.23■■□□□ 1.15
HNRNPU-228ENST00000640306 NBPF1Q3BBV0 1214 aa22.22■■□□□ 1.15
HNRNPU-228ENST00000640306 CROCC2H7BZ55 1655 aa22.22■■□□□ 1.15
HNRNPU-228ENST00000640306 RNF123Q5XPI4 1314 aa22.21■■□□□ 1.15
HNRNPU-228ENST00000640306 MYBBP1AQ9BQG0 1328 aaKnown RBP22.21■■□□□ 1.15
HNRNPU-228ENST00000640306 NOP58Q9Y2X3 529 aaKnown RBP22.21■■□□□ 1.15
HNRNPU-228ENST00000640306 UHRF1BP1Q6BDS2 1440 aa22.2■■□□□ 1.14
HNRNPU-228ENST00000640306 ABCC2Q92887 1545 aa22.2■■□□□ 1.14
HNRNPU-228ENST00000640306 CC2D1BQ5T0F9 858 aaKnown RBP22.18■■□□□ 1.14
HNRNPU-228ENST00000640306 EXOC6Q8TAG9 804 aa22.18■■□□□ 1.14
HNRNPU-228ENST00000640306 CDC42BPAQ5VT25 1732 aa22.17■■□□□ 1.14
HNRNPU-228ENST00000640306 ABCC10Q5T3U5 1492 aa22.17■■□□□ 1.14
HNRNPU-228ENST00000640306 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
HNRNPU-228ENST00000640306 RALBP1Q15311 655 aa22.15■■□□□ 1.14
HNRNPU-228ENST00000640306 CDCA7LQ96GN5 454 aa22.14■■□□□ 1.14
HNRNPU-228ENST00000640306 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
HNRNPU-228ENST00000640306 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
HNRNPU-228ENST00000640306 RRP1P56182 461 aaKnown RBP22.13■■□□□ 1.13
HNRNPU-228ENST00000640306 LRPPRCP42704 1394 aaKnown RBP22.13■■□□□ 1.13
HNRNPU-228ENST00000640306 ANP32AP39687 249 aaKnown RBP22.12■■□□□ 1.13
HNRNPU-228ENST00000640306 RCAN3Q9UKA8 241 aa22.12■■□□□ 1.13
HNRNPU-228ENST00000640306 NLRP13Q86W25 1043 aa22.1■■□□□ 1.13
HNRNPU-228ENST00000640306 ARHGEF12Q9NZN5 1544 aa22.1■■□□□ 1.13
HNRNPU-228ENST00000640306 PLIN1O60240 522 aa22.1■■□□□ 1.13
HNRNPU-228ENST00000640306 CCDC144AA2RUR9 1427 aa22.09■■□□□ 1.13
HNRNPU-228ENST00000640306 KTN1Q86UP2 1357 aaKnown RBP22.09■■□□□ 1.13
HNRNPU-228ENST00000640306 SHANK2Q9UPX8 1470 aa22.09■■□□□ 1.13
HNRNPU-228ENST00000640306 DEKP35659 375 aaKnown RBP22.09■■□□□ 1.13
HNRNPU-228ENST00000640306 ZCCHC11Q5TAX3 1644 aaKnown RBP22.07■■□□□ 1.12
HNRNPU-228ENST00000640306 SKAP1Q86WV1 359 aa22.06■■□□□ 1.12
HNRNPU-228ENST00000640306 FAM135AQ9P2D6 1515 aa22.06■■□□□ 1.12
HNRNPU-228ENST00000640306 TTC37Q6PGP7 1564 aa22.05■■□□□ 1.12
HNRNPU-228ENST00000640306 IPO9Q96P70 1041 aaKnown RBP22.05■■□□□ 1.12
HNRNPU-228ENST00000640306 PANK3Q9H999 370 aa22.05■■□□□ 1.12
HNRNPU-228ENST00000640306 PER1O15534 1290 aaPredicted RBP22.04■■□□□ 1.12
HNRNPU-228ENST00000640306 PRAG1Q86YV5 1406 aa22.04■■□□□ 1.12
HNRNPU-228ENST00000640306 UHRF1BP1LA0JNW5 1464 aa22.04■■□□□ 1.12
HNRNPU-228ENST00000640306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.04■■□□□ 1.124e-10■■■□□ 15.6
HNRNPU-228ENST00000640306 DISP3Q9P2K9 1392 aa22.04■■□□□ 1.12
HNRNPU-228ENST00000640306 ZBTB47Q9UFB7 747 aaPredicted RBP22.03■■□□□ 1.12
HNRNPU-228ENST00000640306 CCDC141Q6ZP82 1450 aa22.02■■□□□ 1.12
HNRNPU-228ENST00000640306 KDM5DQ9BY66 1539 aa22.02■■□□□ 1.11
HNRNPU-228ENST00000640306 PARD3Q8TEW0 1356 aa22.01■■□□□ 1.11
HNRNPU-228ENST00000640306 SAMD9LQ8IVG5 1584 aa21.99■■□□□ 1.11
HNRNPU-228ENST00000640306 TESK2Q96S53 571 aa21.99■■□□□ 1.11
HNRNPU-228ENST00000640306 ARHGAP5Q13017 1502 aa21.99■■□□□ 1.11
HNRNPU-228ENST00000640306 CDC42BPBQ9Y5S2 1711 aa21.98■■□□□ 1.11
HNRNPU-228ENST00000640306 PLA2R1Q13018 1463 aa21.98■■□□□ 1.11
HNRNPU-228ENST00000640306 SYCP2Q9BX26 1530 aa21.97■■□□□ 1.11
HNRNPU-228ENST00000640306 A2MP01023 1474 aa21.97■■□□□ 1.11
HNRNPU-228ENST00000640306 PLEKHH2Q8IVE3 1493 aa21.95■■□□□ 1.1
HNRNPU-228ENST00000640306 PREX2Q70Z35 1606 aa21.95■■□□□ 1.1
HNRNPU-228ENST00000640306 E9PCH4 1651 aa21.94■■□□□ 1.1
HNRNPU-228ENST00000640306 ARHGEF5Q12774 1597 aa21.93■■□□□ 1.1
HNRNPU-228ENST00000640306 PDE4AP27815 886 aa21.93■■□□□ 1.1
HNRNPU-228ENST00000640306 TRPM1Q7Z4N2 1603 aa21.93■■□□□ 1.1
HNRNPU-228ENST00000640306 TMF1P82094 1093 aa21.93■■□□□ 1.1
HNRNPU-228ENST00000640306 CRBNQ96SW2 442 aa21.93■■□□□ 1.1
HNRNPU-228ENST00000640306 PDE3BQ13370 1112 aa21.92■■□□□ 1.1
HNRNPU-228ENST00000640306 RSPH4AQ5TD94 716 aa21.91■■□□□ 1.1
HNRNPU-228ENST00000640306 ADAMTS8Q9UP79 889 aa21.9■■□□□ 1.1
HNRNPU-228ENST00000640306 LAS1LQ9Y4W2 734 aaKnown RBP21.9■■□□□ 1.1
HNRNPU-228ENST00000640306 ERBINQ96RT1 1412 aa21.9■■□□□ 1.1
HNRNPU-228ENST00000640306 C20orf194Q5TEA3 1177 aa21.9■■□□□ 1.1
HNRNPU-228ENST00000640306 COL17A1Q9UMD9 1497 aaPredicted RBP21.89■■□□□ 1.1
HNRNPU-228ENST00000640306 RTL5Q5HYW3 569 aaPredicted RBP21.89■■□□□ 1.09
HNRNPU-228ENST00000640306 WDR7Q9Y4E6 1490 aa21.89■■□□□ 1.09
HNRNPU-228ENST00000640306 TCERG1O14776 1098 aaKnown RBP21.89■■□□□ 1.09
HNRNPU-228ENST00000640306 MYT1LQ9UL68 1186 aa21.89■■□□□ 1.09
HNRNPU-228ENST00000640306 NPM1P06748 294 aaKnown RBP eCLIP21.88■■□□□ 1.09
HNRNPU-228ENST00000640306 ASXL2Q76L83 1435 aa21.88■■□□□ 1.09
HNRNPU-228ENST00000640306 PLCH2O75038 1416 aa21.87■■□□□ 1.09
HNRNPU-228ENST00000640306 CYB5RLQ6IPT4 315 aa21.87■■□□□ 1.09
HNRNPU-228ENST00000640306 MYO5CQ9NQX4 1742 aa21.87■■□□□ 1.09
HNRNPU-228ENST00000640306 GPRASP1Q5JY77 1395 aa21.86■■□□□ 1.09
HNRNPU-228ENST00000640306 EFCAB2Q5VUJ9 269 aa21.86■■□□□ 1.09
HNRNPU-228ENST00000640306 BACH2Q9BYV9 841 aa21.84■■□□□ 1.09
HNRNPU-228ENST00000640306 KNSTRNQ9Y448 316 aa21.83■■□□□ 1.09
HNRNPU-228ENST00000640306 WDR43Q15061 677 aaKnown RBP eCLIP21.81■■□□□ 1.082e-6■■□□□ 12.7
HNRNPU-228ENST00000640306 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
HNRNPU-228ENST00000640306 PRDM15P57071 1507 aaPredicted RBP21.8■■□□□ 1.08
HNRNPU-228ENST00000640306 CCDC146Q8IYE0 955 aa21.79■■□□□ 1.08
HNRNPU-228ENST00000640306 PPP2R1AP30153 589 aa21.79■■□□□ 1.08
HNRNPU-228ENST00000640306 WASHC2CQ9Y4E1 1318 aa21.79■■□□□ 1.08
HNRNPU-228ENST00000640306 BLMP54132 1417 aaPredicted RBP21.79■■□□□ 1.08
HNRNPU-228ENST00000640306 TRAPPC8Q9Y2L5 1435 aa21.78■■□□□ 1.08
HNRNPU-228ENST00000640306 PLEKHH1Q9ULM0 1364 aa21.77■■□□□ 1.07
HNRNPU-228ENST00000640306 MAGI2Q86UL8 1455 aa21.76■■□□□ 1.07
HNRNPU-228ENST00000640306 UNC13BO14795 1591 aa21.75■■□□□ 1.07
HNRNPU-228ENST00000640306 NEFMP07197 916 aa21.74■■□□□ 1.07
HNRNPU-228ENST00000640306 MS4A1P11836 297 aa21.73■■□□□ 1.07
HNRNPU-228ENST00000640306 FANCAO15360 1455 aa21.73■■□□□ 1.07
HNRNPU-228ENST00000640306 SLC4A3P48751 1232 aa21.73■■□□□ 1.07
HNRNPU-228ENST00000640306 AMER1Q5JTC6 1135 aaPredicted RBP21.73■■□□□ 1.07
HNRNPU-228ENST00000640306 DUSP27Q5VZP5 1158 aa21.72■■□□□ 1.07
HNRNPU-228ENST00000640306 ABCC1P33527 1531 aa21.72■■□□□ 1.07
HNRNPU-228ENST00000640306 IQGAP3Q86VI3 1631 aa21.71■■□□□ 1.07
HNRNPU-228ENST00000640306 ZMYM4Q5VZL5 1548 aa21.69■■□□□ 1.06
HNRNPU-228ENST00000640306 DUOX2Q9NRD8 1548 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms