RNA–Protein interactions for RNA: ENST00000639277.1

GFAP-233, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 1,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-233ENST00000639277 MAGI2Q86UL8 1455 aa23.15■■□□□ 1.3
GFAP-233ENST00000639277 RAPGEF3O95398 923 aa23.14■■□□□ 1.3
GFAP-233ENST00000639277 FANCAO15360 1455 aa23.14■■□□□ 1.3
GFAP-233ENST00000639277 ZFYVE16Q7Z3T8 1539 aa23.13■■□□□ 1.29
GFAP-233ENST00000639277 FRMPD1Q5SYB0 1578 aa23.13■■□□□ 1.29
GFAP-233ENST00000639277 POLR1AO95602 1720 aaPredicted RBP23.12■■□□□ 1.29
GFAP-233ENST00000639277 NEO1Q92859 1461 aa23.1■■□□□ 1.29
GFAP-233ENST00000639277 INO80Q9ULG1 1556 aaPredicted RBP23.1■■□□□ 1.29
GFAP-233ENST00000639277 NBPF8Q3BBV2 869 aa23.09■■□□□ 1.29
GFAP-233ENST00000639277 WASHC2AQ641Q2 1341 aa23.09■■□□□ 1.29
GFAP-233ENST00000639277 KDM4FA0A1W2PPD8 638 aa23.06■■□□□ 1.28
GFAP-233ENST00000639277 SPAG9O60271 1321 aaKnown RBP23.06■■□□□ 1.28
GFAP-233ENST00000639277 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
GFAP-233ENST00000639277 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
GFAP-233ENST00000639277 CFAP74Q9C0B2 1584 aa23.04■■□□□ 1.28
GFAP-233ENST00000639277 PELP1Q8IZL8 1130 aaKnown RBP23.04■■□□□ 1.28
GFAP-233ENST00000639277 ATP7AQ04656 1500 aa23.04■■□□□ 1.28
GFAP-233ENST00000639277 SPATA31E1Q6ZUB1 1445 aa23.03■■□□□ 1.28
GFAP-233ENST00000639277 UHRF1BP1Q6BDS2 1440 aa23.03■■□□□ 1.28
GFAP-233ENST00000639277 CNTLNQ9NXG0 1405 aa23.03■■□□□ 1.28
GFAP-233ENST00000639277 DEPDC5O75140 1603 aa23.02■■□□□ 1.28
GFAP-233ENST00000639277 CCDC7Q96M83 1385 aa23.01■■□□□ 1.27
GFAP-233ENST00000639277 AFAP1Q8N556 730 aa23.01■■□□□ 1.27
GFAP-233ENST00000639277 SCAPERQ9BY12 1400 aa23■■□□□ 1.27
GFAP-233ENST00000639277 ATP10AO60312 1499 aa22.99■■□□□ 1.27
GFAP-233ENST00000639277 EIF2AK4Q9P2K8 1649 aaKnown RBP22.98■■□□□ 1.27
GFAP-233ENST00000639277 PLA2R1Q13018 1463 aa22.97■■□□□ 1.27
GFAP-233ENST00000639277 KIDINS220Q9ULH0 1771 aa22.95■■□□□ 1.26
GFAP-233ENST00000639277 CCDC144AA2RUR9 1427 aa22.94■■□□□ 1.26
GFAP-233ENST00000639277 RALGAPBQ86X10 1494 aa22.94■■□□□ 1.26
GFAP-233ENST00000639277 SIGLEC1Q9BZZ2 1709 aa22.94■■□□□ 1.26
GFAP-233ENST00000639277 ZNF518AQ6AHZ1 1483 aa22.94■■□□□ 1.26
GFAP-233ENST00000639277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.94■■□□□ 1.26
GFAP-233ENST00000639277 KDM5CP41229 1560 aa22.93■■□□□ 1.26
GFAP-233ENST00000639277 VWDEQ8N2E2 1590 aa22.92■■□□□ 1.26
GFAP-233ENST00000639277 YEATS2Q9ULM3 1422 aa22.92■■□□□ 1.26
GFAP-233ENST00000639277 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
GFAP-233ENST00000639277 POGZQ7Z3K3 1410 aa22.91■■□□□ 1.26
GFAP-233ENST00000639277 E9PCH4 1651 aa22.91■■□□□ 1.26
GFAP-233ENST00000639277 TET3O43151 1660 aa22.9■■□□□ 1.26
GFAP-233ENST00000639277 USP47Q96K76 1375 aa22.89■■□□□ 1.26
GFAP-233ENST00000639277 DHX29Q7Z478 1369 aaKnown RBP22.89■■□□□ 1.25
GFAP-233ENST00000639277 KIF7Q2M1P5 1343 aa22.88■■□□□ 1.25
GFAP-233ENST00000639277 PRDM15P57071 1507 aaPredicted RBP22.88■■□□□ 1.25
GFAP-233ENST00000639277 ZMYM4Q5VZL5 1548 aa22.88■■□□□ 1.25
GFAP-233ENST00000639277 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
GFAP-233ENST00000639277 AEBP2Q6ZN18 517 aaPredicted RBP22.86■■□□□ 1.25
GFAP-233ENST00000639277 MROH1Q8NDA8 1641 aa22.86■■□□□ 1.25
GFAP-233ENST00000639277 ARHGEF40Q8TER5 1519 aa22.86■■□□□ 1.25
GFAP-233ENST00000639277 ZNF326Q5BKZ1 582 aaKnown RBP22.86■■□□□ 1.25
GFAP-233ENST00000639277 BCORL1Q5H9F3 1711 aa22.86■■□□□ 1.25
GFAP-233ENST00000639277 SPHKAPQ2M3C7 1700 aa22.85■■□□□ 1.25
GFAP-233ENST00000639277 MLH3Q9UHC1 1453 aa22.84■■□□□ 1.25
GFAP-233ENST00000639277 TRPM2O94759 1503 aa22.83■■□□□ 1.25
GFAP-233ENST00000639277 ARID4BQ4LE39 1312 aaPredicted RBP22.83■■□□□ 1.25
GFAP-233ENST00000639277 HECW2Q9P2P5 1572 aa22.83■■□□□ 1.25
GFAP-233ENST00000639277 TRPM1Q7Z4N2 1603 aa22.83■■□□□ 1.24
GFAP-233ENST00000639277 A2MP01023 1474 aa22.82■■□□□ 1.24
GFAP-233ENST00000639277 PTPRTO14522 1441 aa22.82■■□□□ 1.24
GFAP-233ENST00000639277 RNF17Q9BXT8 1623 aaKnown RBP22.81■■□□□ 1.24
GFAP-233ENST00000639277 KANK1Q14678 1352 aa22.81■■□□□ 1.24
GFAP-233ENST00000639277 DCAF11Q8TEB1 546 aa22.81■■□□□ 1.24
GFAP-233ENST00000639277 PRAG1Q86YV5 1406 aa22.8■■□□□ 1.24
GFAP-233ENST00000639277 CEP152O94986 1710 aa22.8■■□□□ 1.24
GFAP-233ENST00000639277 PRKRIP1Q9H875 184 aaPredicted RBP22.79■■□□□ 1.24
GFAP-233ENST00000639277 LAMC1P11047 1609 aa22.78■■□□□ 1.24
GFAP-233ENST00000639277 CARD11Q9BXL7 1154 aa22.76■■□□□ 1.23
GFAP-233ENST00000639277 LMTK2Q8IWU2 1503 aa22.76■■□□□ 1.23
GFAP-233ENST00000639277 KIF3BO15066 747 aa22.76■■□□□ 1.23
GFAP-233ENST00000639277 MYT1LQ9UL68 1186 aa22.76■■□□□ 1.23
GFAP-233ENST00000639277 KDM2AQ9Y2K7 1162 aa22.75■■□□□ 1.23
GFAP-233ENST00000639277 NEURL4Q96JN8 1562 aa22.74■■□□□ 1.23
GFAP-233ENST00000639277 ABCA6Q8N139 1617 aa22.74■■□□□ 1.23
GFAP-233ENST00000639277 ADAMTSL3P82987 1691 aa22.74■■□□□ 1.23
GFAP-233ENST00000639277 ROCK2O75116 1388 aaKnown RBP22.74■■□□□ 1.23
GFAP-233ENST00000639277 EFCAB6Q5THR3 1501 aa22.74■■□□□ 1.23
GFAP-233ENST00000639277 CLTCL1P53675 1640 aa22.74■■□□□ 1.23
GFAP-233ENST00000639277 DIP2CQ9Y2E4 1556 aa22.72■■□□□ 1.23
GFAP-233ENST00000639277 GPRASP1Q5JY77 1395 aa22.72■■□□□ 1.23
GFAP-233ENST00000639277 HNRNPUQ00839 825 aaKnown RBP eCLIP22.69■■□□□ 1.22
GFAP-233ENST00000639277 RGL3Q3MIN7 710 aa22.69■■□□□ 1.22
GFAP-233ENST00000639277 MADDQ8WXG6 1647 aa22.69■■□□□ 1.22
GFAP-233ENST00000639277 MLECQ14165 292 aa22.65■■□□□ 1.22
GFAP-233ENST00000639277 STAC3Q96MF2 364 aa22.65■■□□□ 1.22
GFAP-233ENST00000639277 NEFLP07196 543 aa22.64■■□□□ 1.22
GFAP-233ENST00000639277 MRS2Q9HD23 443 aa22.64■■□□□ 1.22
GFAP-233ENST00000639277 CCDC184Q52MB2 194 aa22.63■■□□□ 1.21
GFAP-233ENST00000639277 KIF1BO60333 1816 aa22.62■■□□□ 1.21
GFAP-233ENST00000639277 ST20-MTHFSA0A0A6YYL1 179 aa22.62■■□□□ 1.21
GFAP-233ENST00000639277 POLR3GLQ9BT43 218 aa22.61■■□□□ 1.21
GFAP-233ENST00000639277 FKBP8Q14318 412 aa22.61■■□□□ 1.21
GFAP-233ENST00000639277 RIMS1Q86UR5 1692 aaKnown RBP22.6■■□□□ 1.21
GFAP-233ENST00000639277 PTPRMP28827 1452 aa22.6■■□□□ 1.21
GFAP-233ENST00000639277 ABCC3O15438 1527 aa22.58■■□□□ 1.21
GFAP-233ENST00000639277 NBPF1Q3BBV0 1214 aa22.58■■□□□ 1.2
GFAP-233ENST00000639277 KIAA1210Q9ULL0 1709 aa22.57■■□□□ 1.2
GFAP-233ENST00000639277 IFT172Q9UG01 1749 aa22.57■■□□□ 1.2
GFAP-233ENST00000639277 REREQ9P2R6 1566 aa22.56■■□□□ 1.2
GFAP-233ENST00000639277 UGGT1Q9NYU2 1555 aa22.55■■□□□ 1.2
GFAP-233ENST00000639277 CAMSAP1Q5T5Y3 1602 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 938.7 ms