RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 SCAPERQ9BY12 1400 aa14.23□□□□□ -0.13
ATM-226ENST00000638443 KDM5DQ9BY66 1539 aa14.22□□□□□ -0.13
ATM-226ENST00000638443 CD109Q6YHK3 1445 aa14.22□□□□□ -0.13
ATM-226ENST00000638443 RPRD2Q5VT52 1461 aaKnown RBP14.21□□□□□ -0.14
ATM-226ENST00000638443 SPAG9O60271 1321 aaKnown RBP14.2□□□□□ -0.14
ATM-226ENST00000638443 FAM135AQ9P2D6 1515 aa14.2□□□□□ -0.14
ATM-226ENST00000638443 DUOX2Q9NRD8 1548 aa14.2□□□□□ -0.14
ATM-226ENST00000638443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.149e-10■■□□□ 12.4
ATM-226ENST00000638443 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
ATM-226ENST00000638443 UNC13BO14795 1591 aa14.19□□□□□ -0.14
ATM-226ENST00000638443 INO80Q9ULG1 1556 aaPredicted RBP14.19□□□□□ -0.14
ATM-226ENST00000638443 ATP7AQ04656 1500 aa14.19□□□□□ -0.14
ATM-226ENST00000638443 TEX14Q8IWB6 1497 aa14.18□□□□□ -0.14
ATM-226ENST00000638443 L3MBTL2Q969R5 705 aa14.18□□□□□ -0.14
ATM-226ENST00000638443 ERBINQ96RT1 1412 aa14.17□□□□□ -0.14
ATM-226ENST00000638443 ACIN1Q9UKV3 1341 aaKnown RBP14.16□□□□□ -0.14
ATM-226ENST00000638443 MYT1LQ9UL68 1186 aa14.15□□□□□ -0.14
ATM-226ENST00000638443 RTEL1-TNFRSF6BF6WH68 1400 aa14.15□□□□□ -0.14
ATM-226ENST00000638443 MAGI2Q86UL8 1455 aa14.14□□□□□ -0.15
ATM-226ENST00000638443 IQGAP3Q86VI3 1631 aa14.13□□□□□ -0.15
ATM-226ENST00000638443 KIDINS220Q9ULH0 1771 aa14.13□□□□□ -0.15
ATM-226ENST00000638443 MAP3K4Q9Y6R4 1608 aa14.13□□□□□ -0.15
ATM-226ENST00000638443 CFAP74Q9C0B2 1584 aa14.12□□□□□ -0.15
ATM-226ENST00000638443 POGZQ7Z3K3 1410 aa14.12□□□□□ -0.15
ATM-226ENST00000638443 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
ATM-226ENST00000638443 TMEM132AQ24JP5 1023 aa14.12□□□□□ -0.15
ATM-226ENST00000638443 DIP2BQ9P265 1576 aa14.11□□□□□ -0.15
ATM-226ENST00000638443 FKBP8Q14318 412 aa14.11□□□□□ -0.15
ATM-226ENST00000638443 VSIG10Q8N0Z9 540 aa14.11□□□□□ -0.15
ATM-226ENST00000638443 NPM3O75607 178 aaKnown RBP14.11□□□□□ -0.15
ATM-226ENST00000638443 NBPF8Q3BBV2 869 aa14.11□□□□□ -0.15
ATM-226ENST00000638443 KDM5CP41229 1560 aa14.11□□□□□ -0.15
ATM-226ENST00000638443 RAPGEF3O95398 923 aa14.1□□□□□ -0.15
ATM-226ENST00000638443 PLA2R1Q13018 1463 aa14.09□□□□□ -0.15
ATM-226ENST00000638443 FAM69CQ0P6D2 419 aa14.08□□□□□ -0.16
ATM-226ENST00000638443 MIER1Q8N108 512 aa14.08□□□□□ -0.16
ATM-226ENST00000638443 DEPDC5O75140 1603 aa14.08□□□□□ -0.16
ATM-226ENST00000638443 HECW2Q9P2P5 1572 aa14.07□□□□□ -0.16
ATM-226ENST00000638443 NEO1Q92859 1461 aa14.07□□□□□ -0.16
ATM-226ENST00000638443 ABCA6Q8N139 1617 aa14.07□□□□□ -0.16
ATM-226ENST00000638443 MROH1Q8NDA8 1641 aa14.07□□□□□ -0.16
ATM-226ENST00000638443 GLI2P10070 1586 aa14.07□□□□□ -0.16
ATM-226ENST00000638443 FRMPD1Q5SYB0 1578 aa14.07□□□□□ -0.16
ATM-226ENST00000638443 KIF3BO15066 747 aa14.06□□□□□ -0.16
ATM-226ENST00000638443 ZNF326Q5BKZ1 582 aaKnown RBP14.06□□□□□ -0.16
ATM-226ENST00000638443 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
ATM-226ENST00000638443 DHX29Q7Z478 1369 aaKnown RBP14.05□□□□□ -0.16
ATM-226ENST00000638443 E9PCH4 1651 aa14.05□□□□□ -0.16
ATM-226ENST00000638443 KDM2AQ9Y2K7 1162 aa14.05□□□□□ -0.16
ATM-226ENST00000638443 PPRC1Q5VV67 1664 aaKnown RBP14.04□□□□□ -0.16
ATM-226ENST00000638443 RICTORQ6R327 1708 aa14.04□□□□□ -0.16
ATM-226ENST00000638443 A2MP01023 1474 aa14.03□□□□□ -0.16
ATM-226ENST00000638443 CCDC144AA2RUR9 1427 aa14.03□□□□□ -0.16
ATM-226ENST00000638443 PRDM15P57071 1507 aaPredicted RBP14.03□□□□□ -0.16
ATM-226ENST00000638443 MLH3Q9UHC1 1453 aa14.03□□□□□ -0.16
ATM-226ENST00000638443 EIF2AK4Q9P2K8 1649 aaKnown RBP14.03□□□□□ -0.16
ATM-226ENST00000638443 NPM2Q86SE8 214 aaKnown RBP14.03□□□□□ -0.16
ATM-226ENST00000638443 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
ATM-226ENST00000638443 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.17
ATM-226ENST00000638443 YEATS2Q9ULM3 1422 aa14.01□□□□□ -0.17
ATM-226ENST00000638443 HSPA5P11021 654 aaKnown RBP14.01□□□□□ -0.17
ATM-226ENST00000638443 DDX10Q13206 875 aaKnown RBP14□□□□□ -0.17
ATM-226ENST00000638443 ATP10AO60312 1499 aa14□□□□□ -0.17
ATM-226ENST00000638443 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
ATM-226ENST00000638443 RGL3Q3MIN7 710 aa14□□□□□ -0.17
ATM-226ENST00000638443 TET3O43151 1660 aa13.99□□□□□ -0.17
ATM-226ENST00000638443 KIF13AQ9H1H9 1805 aa13.98□□□□□ -0.17
ATM-226ENST00000638443 CEP152O94986 1710 aa13.98□□□□□ -0.17
ATM-226ENST00000638443 DCAF11Q8TEB1 546 aa13.98□□□□□ -0.17
ATM-226ENST00000638443 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
ATM-226ENST00000638443 UGGT1Q9NYU2 1555 aa13.97□□□□□ -0.17
ATM-226ENST00000638443 SPHKAPQ2M3C7 1700 aa13.97□□□□□ -0.17
ATM-226ENST00000638443 KANK1Q14678 1352 aa13.96□□□□□ -0.17
ATM-226ENST00000638443 GGT6Q6P531 493 aa13.96□□□□□ -0.17
ATM-226ENST00000638443 C14orf37Q86TY3 774 aa13.96□□□□□ -0.17
ATM-226ENST00000638443 CLTCL1P53675 1640 aa13.96□□□□□ -0.17
ATM-226ENST00000638443 EIF5BO60841 1220 aaKnown RBP13.96□□□□□ -0.18
ATM-226ENST00000638443 EIF4G2P78344 907 aaKnown RBP eCLIP13.96□□□□□ -0.18
ATM-226ENST00000638443 TRPM2O94759 1503 aa13.96□□□□□ -0.18
ATM-226ENST00000638443 EFCAB6Q5THR3 1501 aa13.95□□□□□ -0.18
ATM-226ENST00000638443 UHRF1BP1Q6BDS2 1440 aa13.95□□□□□ -0.18
ATM-226ENST00000638443 C11orf95C9JLR9 678 aaPredicted RBP13.93□□□□□ -0.18
ATM-226ENST00000638443 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
ATM-226ENST00000638443 SPATA31E1Q6ZUB1 1445 aa13.93□□□□□ -0.18
ATM-226ENST00000638443 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
ATM-226ENST00000638443 YTHDC1Q96MU7 727 aaKnown RBP13.93□□□□□ -0.18
ATM-226ENST00000638443 PTPRTO14522 1441 aa13.93□□□□□ -0.18
ATM-226ENST00000638443 COL17A1Q9UMD9 1497 aaPredicted RBP13.93□□□□□ -0.18
ATM-226ENST00000638443 ZMYM4Q5VZL5 1548 aa13.92□□□□□ -0.18
ATM-226ENST00000638443 PRAG1Q86YV5 1406 aa13.91□□□□□ -0.18
ATM-226ENST00000638443 USP47Q96K76 1375 aa13.91□□□□□ -0.18
ATM-226ENST00000638443 BCORL1Q5H9F3 1711 aa13.91□□□□□ -0.18
ATM-226ENST00000638443 ABCC3O15438 1527 aa13.9□□□□□ -0.18
ATM-226ENST00000638443 LMTK2Q8IWU2 1503 aa13.9□□□□□ -0.18
ATM-226ENST00000638443 NPATQ14207 1427 aa13.9□□□□□ -0.18
ATM-226ENST00000638443 TRPM1Q7Z4N2 1603 aa13.89□□□□□ -0.19
ATM-226ENST00000638443 SIGLEC1Q9BZZ2 1709 aa13.89□□□□□ -0.19
ATM-226ENST00000638443 NBPF1Q3BBV0 1214 aa13.87□□□□□ -0.19
ATM-226ENST00000638443 CARD11Q9BXL7 1154 aa13.87□□□□□ -0.19
ATM-226ENST00000638443 ROCK2O75116 1388 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms