RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 NISCHQ9Y2I1 1504 aa22.18■■□□□ 1.14
ATM-226ENST00000638443 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
ATM-226ENST00000638443 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
ATM-226ENST00000638443 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
ATM-226ENST00000638443 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
ATM-226ENST00000638443 DCAF8L2P0C7V8 631 aa18.43■□□□□ 0.54
ATM-226ENST00000638443 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.53
ATM-226ENST00000638443 ABCC9O60706 1549 aa18.27■□□□□ 0.52
ATM-226ENST00000638443 DCAF1Q9Y4B6 1507 aa18.22■□□□□ 0.51
ATM-226ENST00000638443 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
ATM-226ENST00000638443 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
ATM-226ENST00000638443 NACADO15069 1562 aa17.86■□□□□ 0.45
ATM-226ENST00000638443 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
ATM-226ENST00000638443 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
ATM-226ENST00000638443 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
ATM-226ENST00000638443 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
ATM-226ENST00000638443 CECR2Q9BXF3 1484 aa17.34■□□□□ 0.37
ATM-226ENST00000638443 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
ATM-226ENST00000638443 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
ATM-226ENST00000638443 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
ATM-226ENST00000638443 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
ATM-226ENST00000638443 MROH2BQ7Z745 1585 aa17.22■□□□□ 0.35
ATM-226ENST00000638443 WIZO95785 1651 aa17.1■□□□□ 0.33
ATM-226ENST00000638443 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
ATM-226ENST00000638443 SMARCA4P51532 1647 aa17.05■□□□□ 0.32
ATM-226ENST00000638443 EHMT2Q96KQ7 1210 aa16.91■□□□□ 0.3
ATM-226ENST00000638443 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
ATM-226ENST00000638443 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
ATM-226ENST00000638443 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
ATM-226ENST00000638443 EIF4G1Q04637 1599 aaKnown RBP16.74■□□□□ 0.27
ATM-226ENST00000638443 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
ATM-226ENST00000638443 CCDC88BA6NC98 1476 aa16.71■□□□□ 0.26
ATM-226ENST00000638443 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
ATM-226ENST00000638443 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
ATM-226ENST00000638443 TRIM41Q8WV44 630 aa16.51■□□□□ 0.23
ATM-226ENST00000638443 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
ATM-226ENST00000638443 ABCC8Q09428 1581 aa16.49■□□□□ 0.23
ATM-226ENST00000638443 CC2D2AQ9P2K1 1620 aa16.48■□□□□ 0.23
ATM-226ENST00000638443 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
ATM-226ENST00000638443 LOC105371045A0A1W2PR82 267 aa16.35■□□□□ 0.21
ATM-226ENST00000638443 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
ATM-226ENST00000638443 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
ATM-226ENST00000638443 RTN4Q9NQC3 1192 aaKnown RBP16.25■□□□□ 0.19
ATM-226ENST00000638443 SYNJ1O43426 1573 aa16.25■□□□□ 0.19
ATM-226ENST00000638443 CFTRP13569 1480 aa16.21■□□□□ 0.19
ATM-226ENST00000638443 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
ATM-226ENST00000638443 SOGA1O94964 1423 aa16.17■□□□□ 0.18
ATM-226ENST00000638443 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
ATM-226ENST00000638443 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
ATM-226ENST00000638443 NESP48681 1621 aa16.1■□□□□ 0.17
ATM-226ENST00000638443 PRDM2Q13029 1718 aa16.09■□□□□ 0.17
ATM-226ENST00000638443 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
ATM-226ENST00000638443 CUX1P39880 1505 aa16.08■□□□□ 0.17
ATM-226ENST00000638443 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
ATM-226ENST00000638443 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
ATM-226ENST00000638443 EEA1Q15075 1411 aa15.94■□□□□ 0.14
ATM-226ENST00000638443 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
ATM-226ENST00000638443 LAMC3Q9Y6N6 1575 aa15.94■□□□□ 0.14
ATM-226ENST00000638443 DAXXQ9UER7 740 aaPredicted RBP15.94■□□□□ 0.14
ATM-226ENST00000638443 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
ATM-226ENST00000638443 FGD5Q6ZNL6 1462 aa15.88■□□□□ 0.13
ATM-226ENST00000638443 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
ATM-226ENST00000638443 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
ATM-226ENST00000638443 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
ATM-226ENST00000638443 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.13
ATM-226ENST00000638443 GOLGA3Q08378 1498 aa15.83■□□□□ 0.13
ATM-226ENST00000638443 URB2Q14146 1524 aaKnown RBP15.83■□□□□ 0.12
ATM-226ENST00000638443 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
ATM-226ENST00000638443 RAPGEF2Q9Y4G8 1499 aa15.82■□□□□ 0.12
ATM-226ENST00000638443 KIF21BO75037 1637 aa15.82■□□□□ 0.12
ATM-226ENST00000638443 KCNA4P22459 653 aa15.81■□□□□ 0.12
ATM-226ENST00000638443 PDS5BQ9NTI5 1447 aa15.8■□□□□ 0.12
ATM-226ENST00000638443 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
ATM-226ENST00000638443 CUX2O14529 1486 aa15.8■□□□□ 0.12
ATM-226ENST00000638443 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
ATM-226ENST00000638443 KIF27Q86VH2 1401 aa15.79■□□□□ 0.12
ATM-226ENST00000638443 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
ATM-226ENST00000638443 CEP162Q5TB80 1403 aa15.78■□□□□ 0.12
ATM-226ENST00000638443 TNIKQ9UKE5 1360 aa15.77■□□□□ 0.12
ATM-226ENST00000638443 PRXQ9BXM0 1461 aa15.74■□□□□ 0.11
ATM-226ENST00000638443 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
ATM-226ENST00000638443 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
ATM-226ENST00000638443 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
ATM-226ENST00000638443 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
ATM-226ENST00000638443 IGF1RP08069 1367 aa15.67■□□□□ 0.1
ATM-226ENST00000638443 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
ATM-226ENST00000638443 PPARGC1BQ86YN6 1023 aaKnown RBP15.66■□□□□ 0.1
ATM-226ENST00000638443 WDR97A6NE52 1622 aa15.66■□□□□ 0.1
ATM-226ENST00000638443 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
ATM-226ENST00000638443 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
ATM-226ENST00000638443 CLIP1P30622 1438 aa15.61■□□□□ 0.09
ATM-226ENST00000638443 ERCC6Q03468 1493 aa15.6■□□□□ 0.09
ATM-226ENST00000638443 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
ATM-226ENST00000638443 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
ATM-226ENST00000638443 ABCA5Q8WWZ7 1642 aa15.58■□□□□ 0.08
ATM-226ENST00000638443 WDR62O43379 1518 aa15.56■□□□□ 0.08
ATM-226ENST00000638443 TTBK1Q5TCY1 1321 aaPredicted RBP15.55■□□□□ 0.08
ATM-226ENST00000638443 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
ATM-226ENST00000638443 GAPVD1Q14C86 1478 aa15.53■□□□□ 0.08
ATM-226ENST00000638443 TRIM26Q12899 539 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms