RNA–Protein interactions for RNA: ENST00000638351.1

KCNMA1-233, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-233ENST00000638351 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.96■□□□□ 0.31
KCNMA1-233ENST00000638351 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
KCNMA1-233ENST00000638351 TMF1P82094 1093 aa16.96■□□□□ 0.31
KCNMA1-233ENST00000638351 PNISRQ8TF01 805 aaKnown RBP16.95■□□□□ 0.3
KCNMA1-233ENST00000638351 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
KCNMA1-233ENST00000638351 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
KCNMA1-233ENST00000638351 ANKRD30AQ9BXX3 1397 aa16.93■□□□□ 0.3
KCNMA1-233ENST00000638351 RALBP1Q15311 655 aa16.91■□□□□ 0.3
KCNMA1-233ENST00000638351 PRG4Q92954 1404 aaPredicted RBP16.91■□□□□ 0.3
KCNMA1-233ENST00000638351 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
KCNMA1-233ENST00000638351 MIA2Q96PC5 1412 aa16.9■□□□□ 0.3
KCNMA1-233ENST00000638351 NUP153P49790 1475 aaKnown RBP16.9■□□□□ 0.3
KCNMA1-233ENST00000638351 C20orf194Q5TEA3 1177 aa16.89■□□□□ 0.29
KCNMA1-233ENST00000638351 GZF1Q9H116 711 aaPredicted RBP16.89■□□□□ 0.29
KCNMA1-233ENST00000638351 ADAMTS8Q9UP79 889 aa16.89■□□□□ 0.29
KCNMA1-233ENST00000638351 MAGI3Q5TCQ9 1506 aa16.89■□□□□ 0.29
KCNMA1-233ENST00000638351 APAF1O14727 1248 aa16.88■□□□□ 0.29
KCNMA1-233ENST00000638351 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
KCNMA1-233ENST00000638351 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
KCNMA1-233ENST00000638351 ANO8Q9HCE9 1232 aaPredicted RBP16.88■□□□□ 0.29
KCNMA1-233ENST00000638351 TCOF1Q13428 1488 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-233ENST00000638351 PLEKHG5O94827 1062 aa16.87■□□□□ 0.29
KCNMA1-233ENST00000638351 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-233ENST00000638351 DDRGK1Q96HY6 314 aa16.87■□□□□ 0.29
KCNMA1-233ENST00000638351 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
KCNMA1-233ENST00000638351 PTPN23Q9H3S7 1636 aa16.86■□□□□ 0.29
KCNMA1-233ENST00000638351 CHD1O14646 1710 aa16.85■□□□□ 0.29
KCNMA1-233ENST00000638351 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
KCNMA1-233ENST00000638351 COG6Q9Y2V7 657 aa16.84■□□□□ 0.29
KCNMA1-233ENST00000638351 ARID4BQ4LE39 1312 aaPredicted RBP16.84■□□□□ 0.29
KCNMA1-233ENST00000638351 STK26Q9P289 416 aa16.83■□□□□ 0.28
KCNMA1-233ENST00000638351 TROQ12816 1431 aaPredicted RBP16.82■□□□□ 0.28
KCNMA1-233ENST00000638351 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
KCNMA1-233ENST00000638351 BRPF3Q9ULD4 1205 aa16.82■□□□□ 0.28
KCNMA1-233ENST00000638351 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
KCNMA1-233ENST00000638351 ABCA8O94911 1581 aa16.82■□□□□ 0.28
KCNMA1-233ENST00000638351 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
KCNMA1-233ENST00000638351 GGT6Q6P531 493 aa16.8■□□□□ 0.28
KCNMA1-233ENST00000638351 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
KCNMA1-233ENST00000638351 SHROOM2Q13796 1616 aa16.8■□□□□ 0.28
KCNMA1-233ENST00000638351 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
KCNMA1-233ENST00000638351 TRAK1Q9UPV9 953 aa16.79■□□□□ 0.28
KCNMA1-233ENST00000638351 ADCY10Q96PN6 1610 aa16.78■□□□□ 0.28
KCNMA1-233ENST00000638351 BCAR3O75815 825 aa16.78■□□□□ 0.28
KCNMA1-233ENST00000638351 STAG3Q9UJ98 1225 aa16.78■□□□□ 0.28
KCNMA1-233ENST00000638351 KIF3BO15066 747 aa16.77■□□□□ 0.28
KCNMA1-233ENST00000638351 PTPRGP23470 1445 aa16.77■□□□□ 0.28
KCNMA1-233ENST00000638351 MORC1Q86VD1 984 aa16.77■□□□□ 0.28
KCNMA1-233ENST00000638351 PANK1Q8TE04 598 aa16.77■□□□□ 0.28
KCNMA1-233ENST00000638351 ITSN2Q9NZM3 1697 aa16.77■□□□□ 0.28
KCNMA1-233ENST00000638351 CCDC144AA2RUR9 1427 aa16.77■□□□□ 0.28
KCNMA1-233ENST00000638351 NCOA1Q15788 1441 aa16.77■□□□□ 0.28
KCNMA1-233ENST00000638351 DAPK1P53355 1430 aa16.76■□□□□ 0.27
KCNMA1-233ENST00000638351 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
KCNMA1-233ENST00000638351 U2AF1L5P0DN76 240 aaPredicted RBP16.75■□□□□ 0.27
KCNMA1-233ENST00000638351 U2AF1Q01081 240 aaKnown RBP eCLIP16.75■□□□□ 0.27
KCNMA1-233ENST00000638351 SOX12O15370 315 aa16.74■□□□□ 0.27
KCNMA1-233ENST00000638351 ABCC5O15440 1437 aa16.74■□□□□ 0.27
KCNMA1-233ENST00000638351 NFKBIBQ15653 356 aa16.73■□□□□ 0.27
KCNMA1-233ENST00000638351 BACH2Q9BYV9 841 aa16.73■□□□□ 0.27
KCNMA1-233ENST00000638351 APBB1O00213 710 aa16.72■□□□□ 0.27
KCNMA1-233ENST00000638351 FRAT2O75474 233 aaPredicted RBP16.72■□□□□ 0.27
KCNMA1-233ENST00000638351 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
KCNMA1-233ENST00000638351 KIF14Q15058 1648 aa16.71■□□□□ 0.27
KCNMA1-233ENST00000638351 MFAP1P55081 439 aaKnown RBP16.71■□□□□ 0.27
KCNMA1-233ENST00000638351 BECN1Q14457 450 aa16.71■□□□□ 0.27
KCNMA1-233ENST00000638351 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
KCNMA1-233ENST00000638351 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
KCNMA1-233ENST00000638351 CDCA8Q53HL2 280 aa16.7■□□□□ 0.26
KCNMA1-233ENST00000638351 ELL2O00472 640 aaPredicted RBP16.7■□□□□ 0.26
KCNMA1-233ENST00000638351 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
KCNMA1-233ENST00000638351 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
KCNMA1-233ENST00000638351 ATP10BO94823 1461 aa16.69■□□□□ 0.26
KCNMA1-233ENST00000638351 ROCK1Q13464 1354 aa16.69■□□□□ 0.26
KCNMA1-233ENST00000638351 ZBTB7CA1YPR0 619 aa16.68■□□□□ 0.26
KCNMA1-233ENST00000638351 TMEM132EQ6IEE7 984 aa16.68■□□□□ 0.26
KCNMA1-233ENST00000638351 DNMT1P26358 1616 aaKnown RBP16.68■□□□□ 0.26
KCNMA1-233ENST00000638351 KIAA1107Q9UPP5 1409 aa16.68■□□□□ 0.26
KCNMA1-233ENST00000638351 FAM161AQ3B820 660 aa16.67■□□□□ 0.26
KCNMA1-233ENST00000638351 CFAP70Q5T0N1 1121 aa16.67■□□□□ 0.26
KCNMA1-233ENST00000638351 SRPK2P78362 688 aaKnown RBP16.67■□□□□ 0.26
KCNMA1-233ENST00000638351 GSE1Q14687 1217 aa16.67■□□□□ 0.26
KCNMA1-233ENST00000638351 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
KCNMA1-233ENST00000638351 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
KCNMA1-233ENST00000638351 CENPJQ9HC77 1338 aaPredicted RBP16.65■□□□□ 0.26
KCNMA1-233ENST00000638351 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
KCNMA1-233ENST00000638351 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
KCNMA1-233ENST00000638351 BRD4O60885 1362 aaPredicted RBP16.65■□□□□ 0.26
KCNMA1-233ENST00000638351 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
KCNMA1-233ENST00000638351 RPRD2Q5VT52 1461 aaKnown RBP16.64■□□□□ 0.25
KCNMA1-233ENST00000638351 ABCC2Q92887 1545 aa16.63■□□□□ 0.25
KCNMA1-233ENST00000638351 CENPQQ7L2Z9 268 aaPredicted RBP16.63■□□□□ 0.25
KCNMA1-233ENST00000638351 CAMSAP2Q08AD1 1489 aa16.63■□□□□ 0.25
KCNMA1-233ENST00000638351 NAP1L5Q96NT1 182 aaPredicted RBP16.62■□□□□ 0.25
KCNMA1-233ENST00000638351 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
KCNMA1-233ENST00000638351 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
KCNMA1-233ENST00000638351 SPAG9O60271 1321 aaKnown RBP16.61■□□□□ 0.25
KCNMA1-233ENST00000638351 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
KCNMA1-233ENST00000638351 EFCAB2Q5VUJ9 269 aa16.61■□□□□ 0.25
KCNMA1-233ENST00000638351 KDM6BO15054 1643 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms