RNA–Protein interactions for RNA: ENST00000637577.1

FIRRE-202, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 5 BASIC

Gene FIRRE, Length 1,635 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-202ENST00000637577 ZBTB47Q9UFB7 747 aaPredicted RBP8.51□□□□□ -1.05
FIRRE-202ENST00000637577 AQRO60306 1485 aaKnown RBP eCLIP8.5□□□□□ -1.05
FIRRE-202ENST00000637577 SPOCK2Q92563 424 aa8.5□□□□□ -1.05
FIRRE-202ENST00000637577 SNAPC4Q5SXM2 1469 aa8.48□□□□□ -1.05
FIRRE-202ENST00000637577 CCNB3Q8WWL7 1395 aa8.48□□□□□ -1.05
FIRRE-202ENST00000637577 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
FIRRE-202ENST00000637577 CASKIN1Q8WXD9 1431 aa8.48□□□□□ -1.05
FIRRE-202ENST00000637577 THOC2Q8NI27 1593 aaKnown RBP8.48□□□□□ -1.05
FIRRE-202ENST00000637577 CDK11BP21127 795 aaKnown RBP8.47□□□□□ -1.05
FIRRE-202ENST00000637577 NUBP1P53384 320 aa8.47□□□□□ -1.05
FIRRE-202ENST00000637577 P3H3Q8IVL6 736 aa8.47□□□□□ -1.05
FIRRE-202ENST00000637577 CDK11AQ9UQ88 783 aaPredicted RBP8.47□□□□□ -1.05
FIRRE-202ENST00000637577 EIF4G3O43432 1585 aaKnown RBP8.47□□□□□ -1.05
FIRRE-202ENST00000637577 IQGAP2Q13576 1575 aa8.47□□□□□ -1.05
FIRRE-202ENST00000637577 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
FIRRE-202ENST00000637577 IFT140Q96RY7 1462 aa8.46□□□□□ -1.05
FIRRE-202ENST00000637577 FMN1Q68DA7 1419 aa8.46□□□□□ -1.06
FIRRE-202ENST00000637577 GRIN2BQ13224 1484 aa8.45□□□□□ -1.06
FIRRE-202ENST00000637577 MARVELD3Q96A59 401 aa8.45□□□□□ -1.06
FIRRE-202ENST00000637577 ZNF608Q9ULD9 1512 aaPredicted RBP8.45□□□□□ -1.06
FIRRE-202ENST00000637577 PHLDB1Q86UU1 1377 aa8.45□□□□□ -1.06
FIRRE-202ENST00000637577 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.44□□□□□ -1.06
FIRRE-202ENST00000637577 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
FIRRE-202ENST00000637577 KRTAP3-2Q9BYR7 98 aa8.44□□□□□ -1.06
FIRRE-202ENST00000637577 CHMP4AQ9BY43 222 aa8.43□□□□□ -1.06
FIRRE-202ENST00000637577 DHX57Q6P158 1386 aaKnown RBP8.43□□□□□ -1.06
FIRRE-202ENST00000637577 ERCC6Q03468 1493 aa8.43□□□□□ -1.06
FIRRE-202ENST00000637577 FAM212AQ96EL1 285 aa8.43□□□□□ -1.06
FIRRE-202ENST00000637577 HECW1Q76N89 1606 aa8.42□□□□□ -1.06
FIRRE-202ENST00000637577 SUPT6HQ7KZ85 1726 aaKnown RBP8.42□□□□□ -1.06
FIRRE-202ENST00000637577 EMP3P54852 163 aa8.42□□□□□ -1.06
FIRRE-202ENST00000637577 ATP1B4Q9UN42 357 aaPredicted RBP8.41□□□□□ -1.06
FIRRE-202ENST00000637577 EHBP1L1Q8N3D4 1523 aa8.41□□□□□ -1.06
FIRRE-202ENST00000637577 HSP90B1P14625 803 aaKnown RBP8.4□□□□□ -1.06
FIRRE-202ENST00000637577 UGGT2Q9NYU1 1516 aa8.4□□□□□ -1.07
FIRRE-202ENST00000637577 HMGB1P09429 215 aaKnown RBP8.4□□□□□ -1.07
FIRRE-202ENST00000637577 PLCD3Q8N3E9 789 aa8.4□□□□□ -1.07
FIRRE-202ENST00000637577 KIAA0556O60303 1618 aa8.39□□□□□ -1.07
FIRRE-202ENST00000637577 ARID3CA6NKF2 412 aa8.39□□□□□ -1.07
FIRRE-202ENST00000637577 HS3ST6Q96QI5 342 aa8.39□□□□□ -1.07
FIRRE-202ENST00000637577 MAGI3Q5TCQ9 1506 aa8.38□□□□□ -1.07
FIRRE-202ENST00000637577 CCDC18Q5T9S5 1454 aa8.38□□□□□ -1.07
FIRRE-202ENST00000637577 ITGAEP38570 1179 aa8.38□□□□□ -1.07
FIRRE-202ENST00000637577 GRIN2AQ12879 1464 aa8.38□□□□□ -1.07
FIRRE-202ENST00000637577 RAB3GAP2Q9H2M9 1393 aa8.37□□□□□ -1.07
FIRRE-202ENST00000637577 CLSPNQ9HAW4 1339 aa8.37□□□□□ -1.07
FIRRE-202ENST00000637577 FGD6Q6ZV73 1430 aa8.37□□□□□ -1.07
FIRRE-202ENST00000637577 MTUS2Q5JR59 1369 aa8.37□□□□□ -1.07
FIRRE-202ENST00000637577 KCTD17Q8N5Z5 321 aa8.36□□□□□ -1.07
FIRRE-202ENST00000637577 L3MBTL3Q96JM7 780 aaPredicted RBP8.36□□□□□ -1.07
FIRRE-202ENST00000637577 MAPKBP1O60336 1514 aa8.36□□□□□ -1.07
FIRRE-202ENST00000637577 NCOA2Q15596 1464 aa8.36□□□□□ -1.07
FIRRE-202ENST00000637577 CEP170Q5SW79 1584 aa8.36□□□□□ -1.07
FIRRE-202ENST00000637577 ARHGEF11O15085 1522 aa8.36□□□□□ -1.07
FIRRE-202ENST00000637577 C3orf67Q6ZVT6 689 aa8.36□□□□□ -1.07
FIRRE-202ENST00000637577 PDCD7Q8N8D1 485 aaKnown RBP8.36□□□□□ -1.07
FIRRE-202ENST00000637577 MAGI1Q96QZ7 1491 aaPredicted RBP8.36□□□□□ -1.07
FIRRE-202ENST00000637577 PTPN23Q9H3S7 1636 aa8.35□□□□□ -1.07
FIRRE-202ENST00000637577 CDK13Q14004 1512 aaKnown RBP8.35□□□□□ -1.07
FIRRE-202ENST00000637577 POTEB3A0JP26 581 aa8.35□□□□□ -1.07
FIRRE-202ENST00000637577 ZNF316A6NFI3 1004 aaPredicted RBP8.35□□□□□ -1.07
FIRRE-202ENST00000637577 FAM50AQ14320 339 aaKnown RBP8.35□□□□□ -1.07
FIRRE-202ENST00000637577 DIEXFQ68CQ4 756 aaKnown RBP8.35□□□□□ -1.07
FIRRE-202ENST00000637577 POTEBQ6S5H4 581 aa8.35□□□□□ -1.07
FIRRE-202ENST00000637577 SLC24A3Q9HC58 644 aa8.35□□□□□ -1.07
FIRRE-202ENST00000637577 SETD5Q9C0A6 1442 aa8.35□□□□□ -1.07
FIRRE-202ENST00000637577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.35□□□□□ -1.07
FIRRE-202ENST00000637577 DISP1Q96F81 1524 aa8.34□□□□□ -1.07
FIRRE-202ENST00000637577 KIAA0586Q9BVV6 1533 aa8.34□□□□□ -1.07
FIRRE-202ENST00000637577 RAPGEF6Q8TEU7 1601 aa8.34□□□□□ -1.07
FIRRE-202ENST00000637577 PUS7Q96PZ0 661 aaKnown RBP8.34□□□□□ -1.07
FIRRE-202ENST00000637577 EPRSP07814 1512 aaKnown RBP8.34□□□□□ -1.07
FIRRE-202ENST00000637577 MYOM3Q5VTT5 1437 aa8.33□□□□□ -1.08
FIRRE-202ENST00000637577 RAD21O60216 631 aa8.33□□□□□ -1.08
FIRRE-202ENST00000637577 RGS22Q8NE09 1264 aa8.33□□□□□ -1.08
FIRRE-202ENST00000637577 GCC2Q8IWJ2 1684 aa8.33□□□□□ -1.08
FIRRE-202ENST00000637577 APBB1O00213 710 aa8.32□□□□□ -1.08
FIRRE-202ENST00000637577 HS6ST3Q8IZP7 471 aa8.32□□□□□ -1.08
FIRRE-202ENST00000637577 SYNJ2O15056 1496 aa8.32□□□□□ -1.08
FIRRE-202ENST00000637577 FAM205CA6NFA0 338 aa8.32□□□□□ -1.08
FIRRE-202ENST00000637577 ZC3H15Q8WU90 426 aaKnown RBP8.31□□□□□ -1.08
FIRRE-202ENST00000637577 NKX1-1Q15270 411 aaPredicted RBP8.3□□□□□ -1.08
FIRRE-202ENST00000637577 TCOF1Q13428 1488 aaKnown RBP8.29□□□□□ -1.08
FIRRE-202ENST00000637577 ZNF428Q96B54 188 aa8.29□□□□□ -1.08
FIRRE-202ENST00000637577 PTPRKQ15262 1439 aa8.29□□□□□ -1.08
FIRRE-202ENST00000637577 NUP153P49790 1475 aaKnown RBP8.29□□□□□ -1.08
FIRRE-202ENST00000637577 MTMR7Q9Y216 660 aa8.29□□□□□ -1.08
FIRRE-202ENST00000637577 CHD1O14646 1710 aa8.28□□□□□ -1.08
FIRRE-202ENST00000637577 GTPBP6O43824 516 aaPredicted RBP8.28□□□□□ -1.08
FIRRE-202ENST00000637577 HFM1A2PYH4 1435 aa8.28□□□□□ -1.08
FIRRE-202ENST00000637577 NUP160Q12769 1436 aa8.28□□□□□ -1.08
FIRRE-202ENST00000637577 ADCY10Q96PN6 1610 aa8.27□□□□□ -1.09
FIRRE-202ENST00000637577 ITSN2Q9NZM3 1697 aa8.27□□□□□ -1.09
FIRRE-202ENST00000637577 ILDR1Q86SU0 546 aaPredicted RBP8.26□□□□□ -1.09
FIRRE-202ENST00000637577 RNF166Q96A37 237 aaPredicted RBP8.25□□□□□ -1.09
FIRRE-202ENST00000637577 NAIPQ13075 1403 aa8.25□□□□□ -1.09
FIRRE-202ENST00000637577 MKRN3Q13064 507 aaKnown RBP8.25□□□□□ -1.09
FIRRE-202ENST00000637577 KDM6BO15054 1643 aa8.24□□□□□ -1.09
FIRRE-202ENST00000637577 DNMT1P26358 1616 aaKnown RBP8.24□□□□□ -1.09
FIRRE-202ENST00000637577 KIF14Q15058 1648 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms