RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 SKAP1Q86WV1 359 aa19.96■□□□□ 0.79
THUMPD1-206ENST00000636554 KTN1Q86UP2 1357 aaKnown RBP19.95■□□□□ 0.78
THUMPD1-206ENST00000636554 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
THUMPD1-206ENST00000636554 BACH2Q9BYV9 841 aa19.94■□□□□ 0.78
THUMPD1-206ENST00000636554 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
THUMPD1-206ENST00000636554 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
THUMPD1-206ENST00000636554 PLIN1O60240 522 aa19.94■□□□□ 0.78
THUMPD1-206ENST00000636554 C9orf84Q5VXU9 1444 aa19.94■□□□□ 0.78
THUMPD1-206ENST00000636554 PARD3Q8TEW0 1356 aa19.94■□□□□ 0.78
THUMPD1-206ENST00000636554 NLRP13Q86W25 1043 aa19.93■□□□□ 0.78
THUMPD1-206ENST00000636554 IL27Q8NEV9 243 aa19.92■□□□□ 0.78
THUMPD1-206ENST00000636554 NEFMP07197 916 aa19.91■□□□□ 0.78
THUMPD1-206ENST00000636554 KDM5DQ9BY66 1539 aa19.9■□□□□ 0.78
THUMPD1-206ENST00000636554 SHANK2Q9UPX8 1470 aa19.88■□□□□ 0.77
THUMPD1-206ENST00000636554 PDE3BQ13370 1112 aa19.88■□□□□ 0.77
THUMPD1-206ENST00000636554 IFT140Q96RY7 1462 aa19.87■□□□□ 0.77
THUMPD1-206ENST00000636554 TRPM1Q7Z4N2 1603 aa19.87■□□□□ 0.77
THUMPD1-206ENST00000636554 MS4A1P11836 297 aa19.87■□□□□ 0.77
THUMPD1-206ENST00000636554 CC2D1BQ5T0F9 858 aaKnown RBP19.87■□□□□ 0.77
THUMPD1-206ENST00000636554 PER1O15534 1290 aaPredicted RBP19.86■□□□□ 0.77
THUMPD1-206ENST00000636554 CRBNQ96SW2 442 aa19.86■□□□□ 0.77
THUMPD1-206ENST00000636554 EIF4G3O43432 1585 aaKnown RBP19.85■□□□□ 0.77
THUMPD1-206ENST00000636554 PTPRGP23470 1445 aa19.85■□□□□ 0.77
THUMPD1-206ENST00000636554 NBPF1Q3BBV0 1214 aa19.85■□□□□ 0.77
THUMPD1-206ENST00000636554 RTN4Q9NQC3 1192 aaKnown RBP19.85■□□□□ 0.77
THUMPD1-206ENST00000636554 PRAG1Q86YV5 1406 aa19.84■□□□□ 0.77
THUMPD1-206ENST00000636554 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.77
THUMPD1-206ENST00000636554 ANO8Q9HCE9 1232 aaPredicted RBP19.83■□□□□ 0.76
THUMPD1-206ENST00000636554 BLMP54132 1417 aaPredicted RBP19.82■□□□□ 0.76
THUMPD1-206ENST00000636554 DISP3Q9P2K9 1392 aa19.82■□□□□ 0.76
THUMPD1-206ENST00000636554 HNRNPMP52272 730 aaKnown RBP eCLIP19.82■□□□□ 0.76
THUMPD1-206ENST00000636554 RGL3Q3MIN7 710 aa19.82■□□□□ 0.76
THUMPD1-206ENST00000636554 TSPY4P0CV99 314 aa19.81■□□□□ 0.76
THUMPD1-206ENST00000636554 TSPY10P0CW01 314 aa19.81■□□□□ 0.76
THUMPD1-206ENST00000636554 FAM135AQ9P2D6 1515 aa19.81■□□□□ 0.76
THUMPD1-206ENST00000636554 C20orf194Q5TEA3 1177 aa19.81■□□□□ 0.76
THUMPD1-206ENST00000636554 COL17A1Q9UMD9 1497 aaPredicted RBP19.8■□□□□ 0.76
THUMPD1-206ENST00000636554 USP35Q9P2H5 1018 aa19.79■□□□□ 0.76
THUMPD1-206ENST00000636554 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
THUMPD1-206ENST00000636554 CCDC144AA2RUR9 1427 aa19.78■□□□□ 0.76
THUMPD1-206ENST00000636554 PLEKHD1A6NEE1 506 aa19.78■□□□□ 0.76
THUMPD1-206ENST00000636554 PANK3Q9H999 370 aa19.76■□□□□ 0.75
THUMPD1-206ENST00000636554 ABCA8O94911 1581 aa19.76■□□□□ 0.75
THUMPD1-206ENST00000636554 PPM1GO15355 546 aaPredicted RBP19.76■□□□□ 0.75
THUMPD1-206ENST00000636554 FBLN2P98095 1184 aa19.76■□□□□ 0.75
THUMPD1-206ENST00000636554 TESK2Q96S53 571 aa19.76■□□□□ 0.75
THUMPD1-206ENST00000636554 A2MP01023 1474 aa19.75■□□□□ 0.75
THUMPD1-206ENST00000636554 SLC4A3P48751 1232 aa19.75■□□□□ 0.75
THUMPD1-206ENST00000636554 ZMYM4Q5VZL5 1548 aa19.75■□□□□ 0.75
THUMPD1-206ENST00000636554 CHMP7Q8WUX9 453 aaPredicted RBP19.75■□□□□ 0.75
THUMPD1-206ENST00000636554 ATP10BO94823 1461 aa19.74■□□□□ 0.75
THUMPD1-206ENST00000636554 PRDM15P57071 1507 aaPredicted RBP19.73■□□□□ 0.75
THUMPD1-206ENST00000636554 GPRASP1Q5JY77 1395 aa19.73■□□□□ 0.75
THUMPD1-206ENST00000636554 CARMIL2Q6F5E8 1435 aa19.73■□□□□ 0.75
THUMPD1-206ENST00000636554 WASHC2CQ9Y4E1 1318 aa19.73■□□□□ 0.75
THUMPD1-206ENST00000636554 ARHGEF5Q12774 1597 aa19.72■□□□□ 0.75
THUMPD1-206ENST00000636554 PLA2R1Q13018 1463 aa19.72■□□□□ 0.75
THUMPD1-206ENST00000636554 MYO5CQ9NQX4 1742 aa19.72■□□□□ 0.75
THUMPD1-206ENST00000636554 DDRGK1Q96HY6 314 aa19.71■□□□□ 0.75
THUMPD1-206ENST00000636554 JPH4Q96JJ6 628 aa19.71■□□□□ 0.75
THUMPD1-206ENST00000636554 KDM2BQ8NHM5 1336 aa19.71■□□□□ 0.75
THUMPD1-206ENST00000636554 ERBINQ96RT1 1412 aa19.71■□□□□ 0.75
THUMPD1-206ENST00000636554 SAMD9LQ8IVG5 1584 aa19.7■□□□□ 0.74
THUMPD1-206ENST00000636554 PLEKHH2Q8IVE3 1493 aa19.7■□□□□ 0.74
THUMPD1-206ENST00000636554 ADAMTS8Q9UP79 889 aa19.7■□□□□ 0.74
THUMPD1-206ENST00000636554 SYNJ2O15056 1496 aa19.69■□□□□ 0.74
THUMPD1-206ENST00000636554 CCDC141Q6ZP82 1450 aa19.69■□□□□ 0.74
THUMPD1-206ENST00000636554 INSRP06213 1382 aa19.69■□□□□ 0.74
THUMPD1-206ENST00000636554 PLEKHH1Q9ULM0 1364 aa19.68■□□□□ 0.74
THUMPD1-206ENST00000636554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.68■□□□□ 0.744e-12■□□□□ 11.2
THUMPD1-206ENST00000636554 LAMC1P11047 1609 aa19.68■□□□□ 0.74
THUMPD1-206ENST00000636554 PRKCSHP14314 528 aaPredicted RBP19.67■□□□□ 0.74
THUMPD1-206ENST00000636554 NFKBIBQ15653 356 aa19.67■□□□□ 0.74
THUMPD1-206ENST00000636554 CDC42BPBQ9Y5S2 1711 aa19.66■□□□□ 0.74
THUMPD1-206ENST00000636554 BRPF3Q9ULD4 1205 aa19.65■□□□□ 0.74
THUMPD1-206ENST00000636554 DUSP27Q5VZP5 1158 aa19.64■□□□□ 0.73
THUMPD1-206ENST00000636554 TMF1P82094 1093 aa19.64■□□□□ 0.73
THUMPD1-206ENST00000636554 C8orf34Q49A92 452 aa19.64■□□□□ 0.73
THUMPD1-206ENST00000636554 GSE1Q14687 1217 aa19.63■□□□□ 0.73
THUMPD1-206ENST00000636554 NUP160Q12769 1436 aa19.63■□□□□ 0.73
THUMPD1-206ENST00000636554 UNC13BO14795 1591 aa19.63■□□□□ 0.73
THUMPD1-206ENST00000636554 CENPQQ7L2Z9 268 aaPredicted RBP19.63■□□□□ 0.73
THUMPD1-206ENST00000636554 MAGI2Q86UL8 1455 aa19.62■□□□□ 0.73
THUMPD1-206ENST00000636554 SYCP2Q9BX26 1530 aa19.62■□□□□ 0.73
THUMPD1-206ENST00000636554 PREX2Q70Z35 1606 aa19.62■□□□□ 0.73
THUMPD1-206ENST00000636554 EIF2AK4Q9P2K8 1649 aaKnown RBP19.62■□□□□ 0.73
THUMPD1-206ENST00000636554 FAM161AQ3B820 660 aa19.6■□□□□ 0.73
THUMPD1-206ENST00000636554 WDR7Q9Y4E6 1490 aa19.59■□□□□ 0.73
THUMPD1-206ENST00000636554 PPP2R1AP30153 589 aa19.59■□□□□ 0.73
THUMPD1-206ENST00000636554 RGS3P49796 1198 aa19.59■□□□□ 0.73
THUMPD1-206ENST00000636554 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.59■□□□□ 0.73
THUMPD1-206ENST00000636554 WDR43Q15061 677 aaKnown RBP eCLIP19.59■□□□□ 0.73
THUMPD1-206ENST00000636554 FRAT1Q92837 279 aaPredicted RBP19.59■□□□□ 0.73
THUMPD1-206ENST00000636554 DAXXQ9UER7 740 aaPredicted RBP19.58■□□□□ 0.73
THUMPD1-206ENST00000636554 ZNF521Q96K83 1311 aa19.58■□□□□ 0.73
THUMPD1-206ENST00000636554 RNF17Q9BXT8 1623 aaKnown RBP19.58■□□□□ 0.73
THUMPD1-206ENST00000636554 IQGAP3Q86VI3 1631 aa19.56■□□□□ 0.72
THUMPD1-206ENST00000636554 GOLGA2Q08379 1002 aa19.55■□□□□ 0.72
THUMPD1-206ENST00000636554 KNSTRNQ9Y448 316 aa19.55■□□□□ 0.72
THUMPD1-206ENST00000636554 CCDC146Q8IYE0 955 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms