RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
CLN5-208ENST00000636183 RBM33Q96EV2 1170 aaKnown RBP20.09■□□□□ 0.81
CLN5-208ENST00000636183 MSNP26038 577 aaKnown RBP20.09■□□□□ 0.81
CLN5-208ENST00000636183 HMMRO75330 724 aa20.08■□□□□ 0.81
CLN5-208ENST00000636183 PPP4R2Q9NY27 417 aa20.08■□□□□ 0.81
CLN5-208ENST00000636183 NUTM2BA6NNL0 878 aaPredicted RBP20.08■□□□□ 0.8
CLN5-208ENST00000636183 NUTM2EB1AL46 878 aaPredicted RBP20.08■□□□□ 0.8
CLN5-208ENST00000636183 AKAP17AQ02040 695 aaKnown RBP20.08■□□□□ 0.8
CLN5-208ENST00000636183 NUTM2AQ8IVF1 878 aaPredicted RBP20.08■□□□□ 0.8
CLN5-208ENST00000636183 ATF3P18847 181 aa20.07■□□□□ 0.8
CLN5-208ENST00000636183 EIF3AQ14152 1382 aaKnown RBP20.07■□□□□ 0.8
CLN5-208ENST00000636183 EIF2S2P20042 333 aaKnown RBP20.07■□□□□ 0.8
CLN5-208ENST00000636183 FHAD1B1AJZ9 1412 aa20.07■□□□□ 0.8
CLN5-208ENST00000636183 USP35Q9P2H5 1018 aa20.07■□□□□ 0.8
CLN5-208ENST00000636183 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
CLN5-208ENST00000636183 SLC4A3P48751 1232 aa20.05■□□□□ 0.8
CLN5-208ENST00000636183 TEFQ10587 303 aa20.05■□□□□ 0.8
CLN5-208ENST00000636183 PIP4K2BP78356 416 aa20.05■□□□□ 0.8
CLN5-208ENST00000636183 CLUAP1Q96AJ1 413 aa20.04■□□□□ 0.8
CLN5-208ENST00000636183 CCDC43Q96MW1 224 aaKnown RBP20.04■□□□□ 0.8
CLN5-208ENST00000636183 NECTIN2Q92692 538 aa20.04■□□□□ 0.8
CLN5-208ENST00000636183 HSPA5P11021 654 aaKnown RBP20.04■□□□□ 0.8
CLN5-208ENST00000636183 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
CLN5-208ENST00000636183 SF3A1Q15459 793 aaKnown RBP20.03■□□□□ 0.8
CLN5-208ENST00000636183 RWDD1Q9H446 243 aaPredicted RBP20.03■□□□□ 0.8
CLN5-208ENST00000636183 TPD52L1Q16890 204 aaPredicted RBP20.03■□□□□ 0.8
CLN5-208ENST00000636183 ELL2O00472 640 aaPredicted RBP20.03■□□□□ 0.8
CLN5-208ENST00000636183 FOXD4L1Q9NU39 408 aa20.03■□□□□ 0.8
CLN5-208ENST00000636183 COG3Q96JB2 828 aa20.02■□□□□ 0.8
CLN5-208ENST00000636183 MFAP1P55081 439 aaKnown RBP20.02■□□□□ 0.8
CLN5-208ENST00000636183 LMOD3Q0VAK6 560 aa20.02■□□□□ 0.79
CLN5-208ENST00000636183 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
CLN5-208ENST00000636183 APPP05067 770 aa20.01■□□□□ 0.79
CLN5-208ENST00000636183 FYB1O15117 783 aa20.01■□□□□ 0.79
CLN5-208ENST00000636183 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
CLN5-208ENST00000636183 FOXD4L5Q5VV16 416 aaPredicted RBP20■□□□□ 0.79
CLN5-208ENST00000636183 FOXD4L4Q8WXT5 416 aaPredicted RBP20■□□□□ 0.79
CLN5-208ENST00000636183 FAM177BA6PVY3 158 aa20■□□□□ 0.79
CLN5-208ENST00000636183 RILPL2Q969X0 211 aa19.99■□□□□ 0.79
CLN5-208ENST00000636183 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
CLN5-208ENST00000636183 FAM69CQ0P6D2 419 aa19.99■□□□□ 0.79
CLN5-208ENST00000636183 SYNE3Q6ZMZ3 975 aa19.98■□□□□ 0.79
CLN5-208ENST00000636183 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.98■□□□□ 0.79
CLN5-208ENST00000636183 MTMR7Q9Y216 660 aa19.98■□□□□ 0.79
CLN5-208ENST00000636183 ARID3AQ99856 593 aa19.98■□□□□ 0.79
CLN5-208ENST00000636183 PAF1Q8N7H5 531 aa19.98■□□□□ 0.79
CLN5-208ENST00000636183 GZF1Q9H116 711 aaPredicted RBP19.98■□□□□ 0.79
CLN5-208ENST00000636183 RRP7AQ9Y3A4 280 aaKnown RBP19.97■□□□□ 0.79
CLN5-208ENST00000636183 ANKRD30AQ9BXX3 1397 aa19.97■□□□□ 0.79
CLN5-208ENST00000636183 NEXNQ0ZGT2 675 aa19.97■□□□□ 0.79
CLN5-208ENST00000636183 MINK1Q8N4C8 1332 aaPredicted RBP19.96■□□□□ 0.79
CLN5-208ENST00000636183 OSCARQ8IYS5 282 aa19.96■□□□□ 0.79
CLN5-208ENST00000636183 SOGA1O94964 1423 aa19.96■□□□□ 0.79
CLN5-208ENST00000636183 ARHGAP35Q9NRY4 1499 aa19.96■□□□□ 0.79
CLN5-208ENST00000636183 H3BQV1 296 aa19.95■□□□□ 0.79
CLN5-208ENST00000636183 IFFO2Q5TF58 517 aa19.95■□□□□ 0.79
CLN5-208ENST00000636183 KIF16BQ96L93 1317 aa19.95■□□□□ 0.78
CLN5-208ENST00000636183 IKQ13123 557 aaPredicted RBP19.95■□□□□ 0.78
CLN5-208ENST00000636183 NOP58Q9Y2X3 529 aaKnown RBP19.94■□□□□ 0.78
CLN5-208ENST00000636183 TMEM132AQ24JP5 1023 aa19.94■□□□□ 0.78
CLN5-208ENST00000636183 C9orf78Q9NZ63 289 aaPredicted RBP19.94■□□□□ 0.78
CLN5-208ENST00000636183 TPM3P06753 285 aa19.93■□□□□ 0.78
CLN5-208ENST00000636183 NUTM2GQ5VZR2 741 aa19.93■□□□□ 0.78
CLN5-208ENST00000636183 MPHOSPH9Q99550 1183 aa19.92■□□□□ 0.78
CLN5-208ENST00000636183 R3HCC1Q9Y3T6 440 aaKnown RBP19.92■□□□□ 0.78
CLN5-208ENST00000636183 SLKQ9H2G2 1235 aaPredicted RBP19.92■□□□□ 0.78
CLN5-208ENST00000636183 GBP4Q96PP9 640 aa19.92■□□□□ 0.78
CLN5-208ENST00000636183 FAM184AQ8NB25 1140 aa19.92■□□□□ 0.78
CLN5-208ENST00000636183 CCDC27Q2M243 656 aa19.91■□□□□ 0.78
CLN5-208ENST00000636183 IBSPP21815 317 aaPredicted RBP19.91■□□□□ 0.78
CLN5-208ENST00000636183 PAXIP1Q6ZW49 1069 aaPredicted RBP19.91■□□□□ 0.78
CLN5-208ENST00000636183 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.91■□□□□ 0.78
CLN5-208ENST00000636183 PLIN1O60240 522 aa19.9■□□□□ 0.78
CLN5-208ENST00000636183 SYAP1Q96A49 352 aaPredicted RBP19.89■□□□□ 0.78
CLN5-208ENST00000636183 PCMTD1Q96MG8 357 aaPredicted RBP19.89■□□□□ 0.78
CLN5-208ENST00000636183 PMFBP1Q8TBY8 1022 aa19.89■□□□□ 0.77
CLN5-208ENST00000636183 STRN4Q9NRL3 753 aa19.89■□□□□ 0.77
CLN5-208ENST00000636183 MCTP1Q6DN14 999 aa19.88■□□□□ 0.77
CLN5-208ENST00000636183 TPM2P07951 284 aa19.88■□□□□ 0.77
CLN5-208ENST00000636183 NLRP2Q9NX02 1062 aa19.87■□□□□ 0.77
CLN5-208ENST00000636183 RCAN3Q9UKA8 241 aa19.87■□□□□ 0.77
CLN5-208ENST00000636183 KIF3AQ9Y496 699 aa19.87■□□□□ 0.77
CLN5-208ENST00000636183 NACADO15069 1562 aa19.87■□□□□ 0.77
CLN5-208ENST00000636183 TSR1Q2NL82 804 aaKnown RBP19.87■□□□□ 0.77
CLN5-208ENST00000636183 CSPP1Q1MSJ5 1256 aa19.86■□□□□ 0.77
CLN5-208ENST00000636183 TNIKQ9UKE5 1360 aa19.86■□□□□ 0.77
CLN5-208ENST00000636183 FOXD4L6Q3SYB3 417 aaPredicted RBP19.86■□□□□ 0.77
CLN5-208ENST00000636183 FOXD4L3Q6VB84 417 aaPredicted RBP19.86■□□□□ 0.77
CLN5-208ENST00000636183 RAPGEF4Q8WZA2 1011 aa19.86■□□□□ 0.77
CLN5-208ENST00000636183 JPH4Q96JJ6 628 aa19.86■□□□□ 0.77
CLN5-208ENST00000636183 GOLGA6L1Q8N7Z2 621 aa19.84■□□□□ 0.77
CLN5-208ENST00000636183 TRIM29Q14134 588 aa19.84■□□□□ 0.77
CLN5-208ENST00000636183 NFXL1Q6ZNB6 911 aa19.84■□□□□ 0.77
CLN5-208ENST00000636183 LRRFIP1Q32MZ4 808 aaKnown RBP19.83■□□□□ 0.77
CLN5-208ENST00000636183 AIMP1Q12904 312 aaKnown RBP19.83■□□□□ 0.76
CLN5-208ENST00000636183 RALBP1Q15311 655 aa19.83■□□□□ 0.76
CLN5-208ENST00000636183 PATL2C9JE40 543 aaKnown RBP19.82■□□□□ 0.76
CLN5-208ENST00000636183 VGFO15240 615 aaPredicted RBP19.82■□□□□ 0.76
CLN5-208ENST00000636183 WWC2Q6AWC2 1192 aa19.82■□□□□ 0.76
CLN5-208ENST00000636183 VSIG10Q8N0Z9 540 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms