RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 TRIM34Q9BYJ4 488 aa19.85■□□□□ 0.77
CACNA1A-221ENST00000636012 CCAR2Q8N163 923 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-221ENST00000636012 PMFBP1Q8TBY8 1022 aa19.85■□□□□ 0.77
CACNA1A-221ENST00000636012 TERF2IPQ9NYB0 399 aa19.84■□□□□ 0.77
CACNA1A-221ENST00000636012 CLUAP1Q96AJ1 413 aa19.84■□□□□ 0.77
CACNA1A-221ENST00000636012 DEKP35659 375 aaKnown RBP19.84■□□□□ 0.77
CACNA1A-221ENST00000636012 KIF3BO15066 747 aa19.83■□□□□ 0.77
CACNA1A-221ENST00000636012 CSPP1Q1MSJ5 1256 aa19.83■□□□□ 0.77
CACNA1A-221ENST00000636012 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.77
CACNA1A-221ENST00000636012 CARMIL1Q5VZK9 1371 aa19.83■□□□□ 0.76
CACNA1A-221ENST00000636012 FBXW7Q969H0 707 aa19.83■□□□□ 0.76
CACNA1A-221ENST00000636012 APPP05067 770 aa19.82■□□□□ 0.76
CACNA1A-221ENST00000636012 CTDP1Q9Y5B0 961 aaPredicted RBP19.82■□□□□ 0.76
CACNA1A-221ENST00000636012 KIF16BQ96L93 1317 aa19.82■□□□□ 0.76
CACNA1A-221ENST00000636012 HDAC5Q9UQL6 1122 aa19.82■□□□□ 0.76
CACNA1A-221ENST00000636012 TNIKQ9UKE5 1360 aa19.82■□□□□ 0.76
CACNA1A-221ENST00000636012 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
CACNA1A-221ENST00000636012 H3BQV1 296 aa19.81■□□□□ 0.76
CACNA1A-221ENST00000636012 IFFO2Q5TF58 517 aa19.81■□□□□ 0.76
CACNA1A-221ENST00000636012 RILPL2Q969X0 211 aa19.81■□□□□ 0.76
CACNA1A-221ENST00000636012 CARMIL2Q6F5E8 1435 aa19.81■□□□□ 0.76
CACNA1A-221ENST00000636012 WASHC2CQ9Y4E1 1318 aa19.81■□□□□ 0.76
CACNA1A-221ENST00000636012 NUP155O75694 1391 aa19.81■□□□□ 0.76
CACNA1A-221ENST00000636012 NACADO15069 1562 aa19.8■□□□□ 0.76
CACNA1A-221ENST00000636012 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-221ENST00000636012 SYTL4Q96C24 671 aaPredicted RBP19.8■□□□□ 0.76
CACNA1A-221ENST00000636012 C1orf141Q5JVX7 400 aa19.79■□□□□ 0.76
CACNA1A-221ENST00000636012 RRP12Q5JTH9 1297 aaKnown RBP19.79■□□□□ 0.76
CACNA1A-221ENST00000636012 SETD5Q9C0A6 1442 aa19.78■□□□□ 0.76
CACNA1A-221ENST00000636012 TPM3P06753 285 aa19.78■□□□□ 0.76
CACNA1A-221ENST00000636012 AKAP17AQ02040 695 aaKnown RBP19.78■□□□□ 0.76
CACNA1A-221ENST00000636012 HNRNPMP52272 730 aaKnown RBP eCLIP19.78■□□□□ 0.76
CACNA1A-221ENST00000636012 FOXD4L6Q3SYB3 417 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-221ENST00000636012 FOXD4L3Q6VB84 417 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-221ENST00000636012 BCL11BQ9C0K0 894 aaPredicted RBP19.78■□□□□ 0.76
CACNA1A-221ENST00000636012 VSIG10Q8N0Z9 540 aa19.77■□□□□ 0.76
CACNA1A-221ENST00000636012 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
CACNA1A-221ENST00000636012 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.76■□□□□ 0.757e-11■■■■■ 260.8
CACNA1A-221ENST00000636012 TSR1Q2NL82 804 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-221ENST00000636012 NOL10Q9BSC4 688 aaKnown RBP19.76■□□□□ 0.75
CACNA1A-221ENST00000636012 KAT6BQ8WYB5 2073 aa19.75■□□□□ 0.75
CACNA1A-221ENST00000636012 FAM184AQ8NB25 1140 aa19.74■□□□□ 0.75
CACNA1A-221ENST00000636012 CWC22Q9HCG8 908 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-221ENST00000636012 TRAK1Q9UPV9 953 aa19.74■□□□□ 0.75
CACNA1A-221ENST00000636012 RALBP1Q15311 655 aa19.74■□□□□ 0.75
CACNA1A-221ENST00000636012 MPHOSPH9Q99550 1183 aa19.74■□□□□ 0.75
CACNA1A-221ENST00000636012 EFCAB2Q5VUJ9 269 aa19.74■□□□□ 0.75
CACNA1A-221ENST00000636012 RRP7AQ9Y3A4 280 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-221ENST00000636012 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.73■□□□□ 0.75
CACNA1A-221ENST00000636012 LMOD3Q0VAK6 560 aa19.73■□□□□ 0.75
CACNA1A-221ENST00000636012 SAMD1Q6SPF0 538 aaPredicted RBP19.73■□□□□ 0.75
CACNA1A-221ENST00000636012 VPS37DQ86XT2 251 aa19.73■□□□□ 0.75
CACNA1A-221ENST00000636012 AMOTL1Q8IY63 956 aa19.72■□□□□ 0.75
CACNA1A-221ENST00000636012 PRDM2Q13029 1718 aa19.72■□□□□ 0.75
CACNA1A-221ENST00000636012 ST18O60284 1047 aa19.72■□□□□ 0.75
CACNA1A-221ENST00000636012 PHF14O94880 888 aa19.72■□□□□ 0.75
CACNA1A-221ENST00000636012 MCTP1Q6DN14 999 aa19.71■□□□□ 0.75
CACNA1A-221ENST00000636012 NECTIN2Q92692 538 aa19.7■□□□□ 0.74
CACNA1A-221ENST00000636012 ELL2O00472 640 aaPredicted RBP19.7■□□□□ 0.74
CACNA1A-221ENST00000636012 KIF3AQ9Y496 699 aa19.7■□□□□ 0.74
CACNA1A-221ENST00000636012 TPM2P07951 284 aa19.7■□□□□ 0.74
CACNA1A-221ENST00000636012 RBM19Q9Y4C8 960 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-221ENST00000636012 CENPJQ9HC77 1338 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-221ENST00000636012 SYNE3Q6ZMZ3 975 aa19.68■□□□□ 0.74
CACNA1A-221ENST00000636012 GOLGA6L3A6NEY3 463 aa19.68■□□□□ 0.74
CACNA1A-221ENST00000636012 TCERG1O14776 1098 aaKnown RBP19.68■□□□□ 0.74
CACNA1A-221ENST00000636012 EIF2S2P20042 333 aaKnown RBP19.68■□□□□ 0.74
CACNA1A-221ENST00000636012 DHX37Q8IY37 1157 aaKnown RBP19.68■□□□□ 0.74
CACNA1A-221ENST00000636012 PCMTD1Q96MG8 357 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-221ENST00000636012 ANKRD30AQ9BXX3 1397 aa19.67■□□□□ 0.74
CACNA1A-221ENST00000636012 DHX16O60231 1041 aaKnown RBP19.67■□□□□ 0.74
CACNA1A-221ENST00000636012 CCER2I3L3R5 266 aa19.67■□□□□ 0.74
CACNA1A-221ENST00000636012 ANKRD45Q5TZF3 282 aa19.66■□□□□ 0.74
CACNA1A-221ENST00000636012 AK7Q96M32 723 aa19.66■□□□□ 0.74
CACNA1A-221ENST00000636012 TTC5Q8N0Z6 440 aa19.65■□□□□ 0.74
CACNA1A-221ENST00000636012 GOLGA6L19H0YKK7 550 aa19.65■□□□□ 0.74
CACNA1A-221ENST00000636012 USP35Q9P2H5 1018 aa19.65■□□□□ 0.74
CACNA1A-221ENST00000636012 ABCC8Q09428 1581 aa19.64■□□□□ 0.74
CACNA1A-221ENST00000636012 C9orf78Q9NZ63 289 aaPredicted RBP19.64■□□□□ 0.73
CACNA1A-221ENST00000636012 BCL2L13Q9BXK5 485 aa19.64■□□□□ 0.73
CACNA1A-221ENST00000636012 TEFQ10587 303 aa19.63■□□□□ 0.73
CACNA1A-221ENST00000636012 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-221ENST00000636012 PLCD4Q9BRC7 762 aa19.62■□□□□ 0.73
CACNA1A-221ENST00000636012 COG3Q96JB2 828 aa19.62■□□□□ 0.73
CACNA1A-221ENST00000636012 PSME1Q06323 249 aa19.62■□□□□ 0.73
CACNA1A-221ENST00000636012 TRIM29Q14134 588 aa19.61■□□□□ 0.73
CACNA1A-221ENST00000636012 TPM1P09493 284 aa19.61■□□□□ 0.73
CACNA1A-221ENST00000636012 NEXNQ0ZGT2 675 aa19.61■□□□□ 0.73
CACNA1A-221ENST00000636012 SKIDA1Q1XH10 827 aa19.6■□□□□ 0.73
CACNA1A-221ENST00000636012 CCDC43Q96MW1 224 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-221ENST00000636012 SOGA1O94964 1423 aa19.59■□□□□ 0.73
CACNA1A-221ENST00000636012 LRRFIP1Q32MZ4 808 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-221ENST00000636012 BECN2A8MW95 431 aa19.57■□□□□ 0.72
CACNA1A-221ENST00000636012 PAF1Q8N7H5 531 aa19.57■□□□□ 0.72
CACNA1A-221ENST00000636012 DIAPH3Q9NSV4 1193 aa19.57■□□□□ 0.72
CACNA1A-221ENST00000636012 ZNF592Q92610 1267 aa19.56■□□□□ 0.72
CACNA1A-221ENST00000636012 FYB1O15117 783 aa19.56■□□□□ 0.72
CACNA1A-221ENST00000636012 RAB3GAP2Q9H2M9 1393 aa19.55■□□□□ 0.72
CACNA1A-221ENST00000636012 KANK4Q5T7N3 995 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-221ENST00000636012 FOSBP53539 338 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms