RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 SNAPC4Q5SXM2 1469 aa10.74□□□□□ -0.69
SMARCA2-246ENST00000635739 UGGT2Q9NYU1 1516 aa10.74□□□□□ -0.69
SMARCA2-246ENST00000635739 GRIN2BQ13224 1484 aa10.73□□□□□ -0.69
SMARCA2-246ENST00000635739 ANKRD50Q9ULJ7 1429 aa10.73□□□□□ -0.69
SMARCA2-246ENST00000635739 DNMBPQ6XZF7 1577 aa10.73□□□□□ -0.69
SMARCA2-246ENST00000635739 SKAP1Q86WV1 359 aa10.73□□□□□ -0.69
SMARCA2-246ENST00000635739 PDS5BQ9NTI5 1447 aa10.73□□□□□ -0.69
SMARCA2-246ENST00000635739 EPRSP07814 1512 aaKnown RBP10.73□□□□□ -0.69
SMARCA2-246ENST00000635739 HECW1Q76N89 1606 aa10.72□□□□□ -0.69
SMARCA2-246ENST00000635739 NEUROD2Q15784 382 aa10.72□□□□□ -0.69
SMARCA2-246ENST00000635739 GZF1Q9H116 711 aaPredicted RBP10.72□□□□□ -0.69
SMARCA2-246ENST00000635739 THOC2Q8NI27 1593 aaKnown RBP10.72□□□□□ -0.69
SMARCA2-246ENST00000635739 CGNL1Q0VF96 1302 aa10.72□□□□□ -0.69
SMARCA2-246ENST00000635739 ADAMTS8Q9UP79 889 aa10.72□□□□□ -0.69
SMARCA2-246ENST00000635739 PRDM2Q13029 1718 aa10.71□□□□□ -0.69
SMARCA2-246ENST00000635739 SPRYD3Q8NCJ5 442 aa10.71□□□□□ -0.69
SMARCA2-246ENST00000635739 TCOF1Q13428 1488 aaKnown RBP10.71□□□□□ -0.69
SMARCA2-246ENST00000635739 ABCC5O15440 1437 aa10.71□□□□□ -0.69
SMARCA2-246ENST00000635739 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
SMARCA2-246ENST00000635739 CCDC144AA2RUR9 1427 aa10.71□□□□□ -0.7
SMARCA2-246ENST00000635739 CCDC146Q8IYE0 955 aa10.7□□□□□ -0.7
SMARCA2-246ENST00000635739 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
SMARCA2-246ENST00000635739 FTSJ3Q8IY81 847 aaKnown RBP10.7□□□□□ -0.7
SMARCA2-246ENST00000635739 HSCBQ8IWL3 235 aa10.7□□□□□ -0.7
SMARCA2-246ENST00000635739 CENPJQ9HC77 1338 aaPredicted RBP10.69□□□□□ -0.7
SMARCA2-246ENST00000635739 E9PSI1 815 aa10.69□□□□□ -0.7
SMARCA2-246ENST00000635739 GOLGA6L22H0YM25 854 aa10.69□□□□□ -0.7
SMARCA2-246ENST00000635739 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
SMARCA2-246ENST00000635739 UBE2Q2Q8WVN8 375 aa10.69□□□□□ -0.7
SMARCA2-246ENST00000635739 RWDD1Q9H446 243 aaPredicted RBP10.69□□□□□ -0.7
SMARCA2-246ENST00000635739 LRPPRCP42704 1394 aaKnown RBP10.69□□□□□ -0.7
SMARCA2-246ENST00000635739 EIF3AQ14152 1382 aaKnown RBP10.69□□□□□ -0.7
SMARCA2-246ENST00000635739 CDK13Q14004 1512 aaKnown RBP10.68□□□□□ -0.7
SMARCA2-246ENST00000635739 ESF1Q9H501 851 aaKnown RBP10.68□□□□□ -0.7
SMARCA2-246ENST00000635739 C20orf194Q5TEA3 1177 aa10.68□□□□□ -0.7
SMARCA2-246ENST00000635739 AEBP2Q6ZN18 517 aaPredicted RBP10.68□□□□□ -0.7
SMARCA2-246ENST00000635739 TEX14Q8IWB6 1497 aa10.68□□□□□ -0.7
SMARCA2-246ENST00000635739 APAF1O14727 1248 aa10.67□□□□□ -0.7
SMARCA2-246ENST00000635739 HNRNPMP52272 730 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMARCA2-246ENST00000635739 MYH16Q9H6N6 1097 aa10.67□□□□□ -0.7
SMARCA2-246ENST00000635739 HSP90AA2PQ14568 343 aaPredicted RBP10.67□□□□□ -0.7
SMARCA2-246ENST00000635739 CFAP53Q96M91 514 aa10.67□□□□□ -0.7
SMARCA2-246ENST00000635739 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
SMARCA2-246ENST00000635739 NGEFQ8N5V2 710 aa10.66□□□□□ -0.7
SMARCA2-246ENST00000635739 NBPF1Q3BBV0 1214 aa10.65□□□□□ -0.7
SMARCA2-246ENST00000635739 HSP90AB1P08238 724 aaKnown RBP10.65□□□□□ -0.7
SMARCA2-246ENST00000635739 RSPH4AQ5TD94 716 aa10.65□□□□□ -0.7
SMARCA2-246ENST00000635739 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
SMARCA2-246ENST00000635739 CTTNBP2Q8WZ74 1663 aa10.65□□□□□ -0.7
SMARCA2-246ENST00000635739 CLUAP1Q96AJ1 413 aa10.65□□□□□ -0.7
SMARCA2-246ENST00000635739 KDM5BQ9UGL1 1544 aa10.64□□□□□ -0.71
SMARCA2-246ENST00000635739 CARMIL2Q6F5E8 1435 aa10.64□□□□□ -0.71
SMARCA2-246ENST00000635739 PPP2R1AP30153 589 aa10.64□□□□□ -0.71
SMARCA2-246ENST00000635739 POGKQ9P215 609 aa10.64□□□□□ -0.71
SMARCA2-246ENST00000635739 MFAP1P55081 439 aaKnown RBP10.63□□□□□ -0.71
SMARCA2-246ENST00000635739 GBP4Q96PP9 640 aa10.63□□□□□ -0.71
SMARCA2-246ENST00000635739 VSIG10Q8N0Z9 540 aa10.63□□□□□ -0.71
SMARCA2-246ENST00000635739 RALGAPBQ86X10 1494 aa10.63□□□□□ -0.71
SMARCA2-246ENST00000635739 DDX11L8A8MPP1 907 aa10.63□□□□□ -0.71
SMARCA2-246ENST00000635739 CHMP5Q9NZZ3 219 aa10.63□□□□□ -0.71
SMARCA2-246ENST00000635739 PDE3AQ14432 1141 aa10.62□□□□□ -0.71
SMARCA2-246ENST00000635739 TROQ12816 1431 aaPredicted RBP10.62□□□□□ -0.71
SMARCA2-246ENST00000635739 PARD3Q8TEW0 1356 aa10.62□□□□□ -0.71
SMARCA2-246ENST00000635739 URB2Q14146 1524 aaKnown RBP10.62□□□□□ -0.71
SMARCA2-246ENST00000635739 TNNT2P45379 298 aaPredicted RBP10.62□□□□□ -0.71
SMARCA2-246ENST00000635739 GCC2Q8IWJ2 1684 aa10.62□□□□□ -0.71
SMARCA2-246ENST00000635739 CHGAP10645 457 aaKnown RBP10.62□□□□□ -0.71
SMARCA2-246ENST00000635739 C8orf34Q49A92 452 aa10.62□□□□□ -0.71
SMARCA2-246ENST00000635739 PTMSP20962 102 aa10.61□□□□□ -0.71
SMARCA2-246ENST00000635739 AAMPQ13685 434 aa10.61□□□□□ -0.71
SMARCA2-246ENST00000635739 DUSP27Q5VZP5 1158 aa10.61□□□□□ -0.71
SMARCA2-246ENST00000635739 MORC1Q86VD1 984 aa10.61□□□□□ -0.71
SMARCA2-246ENST00000635739 PRG4Q92954 1404 aaPredicted RBP10.61□□□□□ -0.71
SMARCA2-246ENST00000635739 BCAR3O75815 825 aa10.61□□□□□ -0.71
SMARCA2-246ENST00000635739 SLFN5Q08AF3 891 aa10.61□□□□□ -0.71
SMARCA2-246ENST00000635739 PANK1Q8TE04 598 aa10.6□□□□□ -0.71
SMARCA2-246ENST00000635739 MRE11P49959 708 aa10.6□□□□□ -0.71
SMARCA2-246ENST00000635739 NCLP19338 710 aaKnown RBP10.6□□□□□ -0.71
SMARCA2-246ENST00000635739 MSNP26038 577 aaKnown RBP10.59□□□□□ -0.71
SMARCA2-246ENST00000635739 C9orf84Q5VXU9 1444 aa10.59□□□□□ -0.71
SMARCA2-246ENST00000635739 IQGAP2Q13576 1575 aa10.59□□□□□ -0.71
SMARCA2-246ENST00000635739 ERBINQ96RT1 1412 aa10.59□□□□□ -0.71
SMARCA2-246ENST00000635739 CAMSAP2Q08AD1 1489 aa10.58□□□□□ -0.72
SMARCA2-246ENST00000635739 TRAK2O60296 914 aa10.58□□□□□ -0.72
SMARCA2-246ENST00000635739 KDM2BQ8NHM5 1336 aa10.58□□□□□ -0.72
SMARCA2-246ENST00000635739 PZPP20742 1482 aa10.58□□□□□ -0.72
SMARCA2-246ENST00000635739 KDM6BO15054 1643 aa10.57□□□□□ -0.72
SMARCA2-246ENST00000635739 BCL2L13Q9BXK5 485 aa10.57□□□□□ -0.72
SMARCA2-246ENST00000635739 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
SMARCA2-246ENST00000635739 C22orf23Q9BZE7 217 aa10.57□□□□□ -0.72
SMARCA2-246ENST00000635739 DENND4BO75064 1496 aaPredicted RBP10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 UHRF1BP1Q6BDS2 1440 aa10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 PER1O15534 1290 aaPredicted RBP10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 MCM4P33991 863 aa10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 SAMD9Q5K651 1589 aa10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 NINLQ9Y2I6 1382 aa10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 RRP7AQ9Y3A4 280 aaKnown RBP10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 LAMC3Q9Y6N6 1575 aa10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 KIF21AQ7Z4S6 1674 aa10.56□□□□□ -0.72
SMARCA2-246ENST00000635739 SKOR2Q2VWA4 1001 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms