RNA–Protein interactions for RNA: ENST00000630913.2

PICALM-224, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5 BASIC

Gene PICALM, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-224	ENST00000630913	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.05	■■■□□ 2.88
PICALM-224	ENST00000630913	MAST1	Q9Y2H9	1570 aa		33.04	■■■□□ 2.88
PICALM-224	ENST00000630913	ADGRL1	O94910	1474 aa		33.03	■■■□□ 2.88
PICALM-224	ENST00000630913	CD109	Q6YHK3	1445 aa		33.02	■■■□□ 2.88
PICALM-224	ENST00000630913	KIF7	Q2M1P5	1343 aa		33.02	■■■□□ 2.88
PICALM-224	ENST00000630913	ARAP3	Q8WWN8	1544 aa		33	■■■□□ 2.87
PICALM-224	ENST00000630913	CCDC184	Q52MB2	194 aa		33	■■■□□ 2.87
PICALM-224	ENST00000630913	PLXNC1	O60486	1568 aa		32.95	■■■□□ 2.87
PICALM-224	ENST00000630913	FAM135A	Q9P2D6	1515 aa		32.93	■■■□□ 2.86
PICALM-224	ENST00000630913	ZFYVE16	Q7Z3T8	1539 aa		32.92	■■■□□ 2.86
PICALM-224	ENST00000630913	DUOX2	Q9NRD8	1548 aa		32.91	■■■□□ 2.86
PICALM-224	ENST00000630913	BCORL1	Q5H9F3	1711 aa		32.89	■■■□□ 2.86
PICALM-224	ENST00000630913	KDM5D	Q9BY66	1539 aa		32.89	■■■□□ 2.86
PICALM-224	ENST00000630913	ZNF326	Q5BKZ1	582 aa	Known RBP	32.88	■■■□□ 2.85
PICALM-224	ENST00000630913	KDM5C	P41229	1560 aa		32.87	■■■□□ 2.85
PICALM-224	ENST00000630913	MRS2	Q9HD23	443 aa		32.86	■■■□□ 2.85
PICALM-224	ENST00000630913	RAPGEF3	O95398	923 aa		32.86	■■■□□ 2.85
PICALM-224	ENST00000630913	UHRF1BP1	Q6BDS2	1440 aa		32.84	■■■□□ 2.85
PICALM-224	ENST00000630913	USP47	Q96K76	1375 aa		32.84	■■■□□ 2.85
PICALM-224	ENST00000630913	ATP7A	Q04656	1500 aa		32.84	■■■□□ 2.85
PICALM-224	ENST00000630913	ERBIN	Q96RT1	1412 aa		32.82	■■■□□ 2.85
PICALM-224	ENST00000630913	ZBED9	Q6R2W3	1325 aa		32.82	■■■□□ 2.84
PICALM-224	ENST00000630913	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.81	■■■□□ 2.84
PICALM-224	ENST00000630913	DHX29	Q7Z478	1369 aa	Known RBP	32.81	■■■□□ 2.84
PICALM-224	ENST00000630913	UNC13B	O14795	1591 aa		32.8	■■■□□ 2.84
PICALM-224	ENST00000630913	KIF3B	O15066	747 aa		32.8	■■■□□ 2.84
PICALM-224	ENST00000630913	FAM69C	Q0P6D2	419 aa		32.8	■■■□□ 2.84
PICALM-224	ENST00000630913	ERICH6B	Q5W0A0	696 aa		32.8	■■■□□ 2.84
PICALM-224	ENST00000630913	FAM9B	Q8IZU0	186 aa		32.8	■■■□□ 2.84
PICALM-224	ENST00000630913	RALGAPB	Q86X10	1494 aa		32.79	■■■□□ 2.84
PICALM-224	ENST00000630913	RBM19	Q9Y4C8	960 aa	Known RBP	32.79	■■■□□ 2.84
PICALM-224	ENST00000630913	INO80	Q9ULG1	1556 aa	Predicted RBP	32.77	■■■□□ 2.84
PICALM-224	ENST00000630913	KDM2A	Q9Y2K7	1162 aa		32.77	■■■□□ 2.84
PICALM-224	ENST00000630913	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.77	■■■□□ 2.84
PICALM-224	ENST00000630913	PLA2R1	Q13018	1463 aa		32.73	■■■□□ 2.83
PICALM-224	ENST00000630913	RGL3	Q3MIN7	710 aa		32.73	■■■□□ 2.83
PICALM-224	ENST00000630913	IRX6	P78412	446 aa	Predicted RBP	32.72	■■■□□ 2.83
PICALM-224	ENST00000630913	ZNF518A	Q6AHZ1	1483 aa		32.72	■■■□□ 2.83
PICALM-224	ENST00000630913	ANP32E	Q9BTT0	268 aa		32.71	■■■□□ 2.83
PICALM-224	ENST00000630913	POGZ	Q7Z3K3	1410 aa		32.7	■■■□□ 2.83
PICALM-224	ENST00000630913	KIDINS220	Q9ULH0	1771 aa		32.7	■■■□□ 2.83
PICALM-224	ENST00000630913	IQGAP3	Q86VI3	1631 aa		32.69	■■■□□ 2.82
PICALM-224	ENST00000630913	MAGI2	Q86UL8	1455 aa		32.68	■■■□□ 2.82
PICALM-224	ENST00000630913	DCAF11	Q8TEB1	546 aa		32.67	■■■□□ 2.82
PICALM-224	ENST00000630913	CCDC144A	A2RUR9	1427 aa		32.64	■■■□□ 2.82
PICALM-224	ENST00000630913	ROCK2	O75116	1388 aa	Known RBP	32.64	■■■□□ 2.82
PICALM-224	ENST00000630913	PPP4R2	Q9NY27	417 aa		32.62	■■■□□ 2.81
PICALM-224	ENST00000630913	MAP3K4	Q9Y6R4	1608 aa		32.61	■■■□□ 2.81
PICALM-224	ENST00000630913	CFAP74	Q9C0B2	1584 aa		32.59	■■■□□ 2.81
PICALM-224	ENST00000630913	TSPOAP1	O95153	1857 aa		32.58	■■■□□ 2.81
PICALM-224	ENST00000630913	GGT6	Q6P531	493 aa		32.58	■■■□□ 2.81
PICALM-224	ENST00000630913	NEO1	Q92859	1461 aa		32.57	■■■□□ 2.81
PICALM-224	ENST00000630913	CARD11	Q9BXL7	1154 aa		32.56	■■■□□ 2.8
PICALM-224	ENST00000630913	DIP2B	Q9P265	1576 aa		32.56	■■■□□ 2.8
PICALM-224	ENST00000630913	A2M	P01023	1474 aa		32.55	■■■□□ 2.8
PICALM-224	ENST00000630913	SMG6	Q86US8	1419 aa	Known RBP	32.53	■■■□□ 2.8
PICALM-224	ENST00000630913	POLR3GL	Q9BT43	218 aa		32.53	■■■□□ 2.8
PICALM-224	ENST00000630913		E9PCH4	1651 aa		32.52	■■■□□ 2.8
PICALM-224	ENST00000630913	MLH3	Q9UHC1	1453 aa		32.51	■■■□□ 2.8
PICALM-224	ENST00000630913	FRMPD1	Q5SYB0	1578 aa		32.51	■■■□□ 2.79
PICALM-224	ENST00000630913	HECW2	Q9P2P5	1572 aa		32.51	■■■□□ 2.79
PICALM-224	ENST00000630913	DEPDC5	O75140	1603 aa		32.5	■■■□□ 2.79
PICALM-224	ENST00000630913	MROH1	Q8NDA8	1641 aa		32.5	■■■□□ 2.79
PICALM-224	ENST00000630913	YEATS2	Q9ULM3	1422 aa		32.49	■■■□□ 2.79
PICALM-224	ENST00000630913	ABCA6	Q8N139	1617 aa		32.49	■■■□□ 2.79
PICALM-224	ENST00000630913	KANK1	Q14678	1352 aa		32.49	■■■□□ 2.79
PICALM-224	ENST00000630913	GLI2	P10070	1586 aa		32.49	■■■□□ 2.79
PICALM-224	ENST00000630913	TRPM1	Q7Z4N2	1603 aa		32.47	■■■□□ 2.79
PICALM-224	ENST00000630913	ATP10A	O60312	1499 aa		32.46	■■■□□ 2.79
PICALM-224	ENST00000630913	ST20-MTHFS	A0A0A6YYL1	179 aa		32.44	■■■□□ 2.78
PICALM-224	ENST00000630913	PNISR	Q8TF01	805 aa	Known RBP	32.42	■■■□□ 2.78
PICALM-224	ENST00000630913	PRDM15	P57071	1507 aa	Predicted RBP	32.42	■■■□□ 2.78
PICALM-224	ENST00000630913	RICTOR	Q6R327	1708 aa		32.41	■■■□□ 2.78
PICALM-224	ENST00000630913	VWDE	Q8N2E2	1590 aa		32.41	■■■□□ 2.78
PICALM-224	ENST00000630913	PRAG1	Q86YV5	1406 aa		32.41	■■■□□ 2.78
PICALM-224	ENST00000630913	KTN1	Q86UP2	1357 aa	Known RBP	32.41	■■■□□ 2.78
PICALM-224	ENST00000630913	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.39	■■■□□ 2.78
PICALM-224	ENST00000630913	NBPF1	Q3BBV0	1214 aa		32.39	■■■□□ 2.78
PICALM-224	ENST00000630913	NUDC	Q9Y266	331 aa		32.39	■■■□□ 2.78
PICALM-224	ENST00000630913	FANCI	Q9NVI1	1328 aa		32.39	■■■□□ 2.78
PICALM-224	ENST00000630913	UGGT1	Q9NYU2	1555 aa		32.38	■■■□□ 2.77
PICALM-224	ENST00000630913	CNGB1	Q14028	1251 aa	Predicted RBP	32.38	■■■□□ 2.77
PICALM-224	ENST00000630913	PPRC1	Q5VV67	1664 aa	Known RBP	32.37	■■■□□ 2.77
PICALM-224	ENST00000630913	RNF123	Q5XPI4	1314 aa		32.37	■■■□□ 2.77
PICALM-224	ENST00000630913	TET3	O43151	1660 aa		32.36	■■■□□ 2.77
PICALM-224	ENST00000630913	DIP2C	Q9Y2E4	1556 aa		32.36	■■■□□ 2.77
PICALM-224	ENST00000630913	LRPPRC	P42704	1394 aa	Known RBP	32.35	■■■□□ 2.77
PICALM-224	ENST00000630913	WASHC2C	Q9Y4E1	1318 aa		32.35	■■■□□ 2.77
PICALM-224	ENST00000630913	LAMC1	P11047	1609 aa		32.35	■■■□□ 2.77
PICALM-224	ENST00000630913	BRD4	O60885	1362 aa	Predicted RBP	32.34	■■■□□ 2.77
PICALM-224	ENST00000630913	TMC1	Q8TDI8	760 aa		32.34	■■■□□ 2.77
PICALM-224	ENST00000630913	CEP152	O94986	1710 aa		32.34	■■■□□ 2.77
PICALM-224	ENST00000630913	B4GALNT3	Q6L9W6	998 aa		32.33	■■■□□ 2.77
PICALM-224	ENST00000630913	CFAP65	Q6ZU64	1925 aa	Known RBP	32.32	■■■□□ 2.77
PICALM-224	ENST00000630913	PTPRT	O14522	1441 aa		32.32	■■■□□ 2.76
PICALM-224	ENST00000630913	RALBP1	Q15311	655 aa		32.32	■■■□□ 2.76
PICALM-224	ENST00000630913	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.31	■■■□□ 2.76
PICALM-224	ENST00000630913	CLTCL1	P53675	1640 aa		32.31	■■■□□ 2.76
PICALM-224	ENST00000630913	GPRASP1	Q5JY77	1395 aa		32.31	■■■□□ 2.76
PICALM-224	ENST00000630913	TRPM2	O94759	1503 aa		32.3	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms