RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 MYCNP04198 464 aaPredicted RBP11.22□□□□□ -0.61
SOX9-AS1-218ENST00000628742 UBTFP17480 764 aaKnown RBP11.22□□□□□ -0.61
SOX9-AS1-218ENST00000628742 A2ML1A8K2U0 1454 aa11.21□□□□□ -0.61
SOX9-AS1-218ENST00000628742 SPINK5Q9NQ38 1064 aaPredicted RBP11.21□□□□□ -0.61
SOX9-AS1-218ENST00000628742 CLTCQ00610 1675 aaKnown RBP11.2□□□□□ -0.62
SOX9-AS1-218ENST00000628742 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
SOX9-AS1-218ENST00000628742 DNMT1P26358 1616 aaKnown RBP11.2□□□□□ -0.62
SOX9-AS1-218ENST00000628742 NEURL4Q96JN8 1562 aa11.2□□□□□ -0.62
SOX9-AS1-218ENST00000628742 SPAG9O60271 1321 aaKnown RBP11.2□□□□□ -0.62
SOX9-AS1-218ENST00000628742 ZNF335Q9H4Z2 1342 aaPredicted RBP11.2□□□□□ -0.62
SOX9-AS1-218ENST00000628742 ZBTB22O15209 634 aa11.2□□□□□ -0.62
SOX9-AS1-218ENST00000628742 ESF1Q9H501 851 aaKnown RBP11.19□□□□□ -0.62
SOX9-AS1-218ENST00000628742 CPS1P31327 1500 aa11.19□□□□□ -0.62
SOX9-AS1-218ENST00000628742 MED14O60244 1454 aa11.19□□□□□ -0.62
SOX9-AS1-218ENST00000628742 SUPT6HQ7KZ85 1726 aaKnown RBP11.18□□□□□ -0.62
SOX9-AS1-218ENST00000628742 ALKQ9UM73 1620 aa11.18□□□□□ -0.62
SOX9-AS1-218ENST00000628742 SAMD1Q6SPF0 538 aaPredicted RBP11.18□□□□□ -0.62
SOX9-AS1-218ENST00000628742 NCKAP5LQ9HCH0 1330 aa11.17□□□□□ -0.62
SOX9-AS1-218ENST00000628742 PZPP20742 1482 aa11.17□□□□□ -0.62
SOX9-AS1-218ENST00000628742 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
SOX9-AS1-218ENST00000628742 CAPN15O75808 1086 aa11.16□□□□□ -0.62
SOX9-AS1-218ENST00000628742 ATP1B4Q9UN42 357 aaPredicted RBP11.16□□□□□ -0.62
SOX9-AS1-218ENST00000628742 DEPDC5O75140 1603 aa11.16□□□□□ -0.62
SOX9-AS1-218ENST00000628742 VWDEQ8N2E2 1590 aa11.16□□□□□ -0.62
SOX9-AS1-218ENST00000628742 DHX29Q7Z478 1369 aaKnown RBP11.16□□□□□ -0.62
SOX9-AS1-218ENST00000628742 HNRNPMP52272 730 aaKnown RBP eCLIP11.15□□□□□ -0.62
SOX9-AS1-218ENST00000628742 APLP2Q06481 763 aa11.15□□□□□ -0.62
SOX9-AS1-218ENST00000628742 CEP162Q5TB80 1403 aa11.15□□□□□ -0.62
SOX9-AS1-218ENST00000628742 POLR1AO95602 1720 aaPredicted RBP11.15□□□□□ -0.63
SOX9-AS1-218ENST00000628742 KDM5DQ9BY66 1539 aa11.14□□□□□ -0.63
SOX9-AS1-218ENST00000628742 NLRP1Q9C000 1473 aa11.13□□□□□ -0.63
SOX9-AS1-218ENST00000628742 SHANK2Q9UPX8 1470 aa11.13□□□□□ -0.63
SOX9-AS1-218ENST00000628742 MED1Q15648 1581 aaPredicted RBP11.13□□□□□ -0.63
SOX9-AS1-218ENST00000628742 CFDP1Q9UEE9 299 aaPredicted RBP11.13□□□□□ -0.63
SOX9-AS1-218ENST00000628742 UBAP1LF5GYI3 381 aa11.12□□□□□ -0.63
SOX9-AS1-218ENST00000628742 EHBP1L1Q8N3D4 1523 aa11.12□□□□□ -0.63
SOX9-AS1-218ENST00000628742 CCNB3Q8WWL7 1395 aa11.12□□□□□ -0.63
SOX9-AS1-218ENST00000628742 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
SOX9-AS1-218ENST00000628742 TNRQ92752 1358 aa11.1□□□□□ -0.63
SOX9-AS1-218ENST00000628742 ARHGEF5Q12774 1597 aa11.1□□□□□ -0.63
SOX9-AS1-218ENST00000628742 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
SOX9-AS1-218ENST00000628742 RNF17Q9BXT8 1623 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-218ENST00000628742 CCDC141Q6ZP82 1450 aa11.09□□□□□ -0.63
SOX9-AS1-218ENST00000628742 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
SOX9-AS1-218ENST00000628742 RSPH4AQ5TD94 716 aa11.08□□□□□ -0.64
SOX9-AS1-218ENST00000628742 MTUS2Q5JR59 1369 aa11.07□□□□□ -0.64
SOX9-AS1-218ENST00000628742 HSPA1LP34931 641 aa11.07□□□□□ -0.64
SOX9-AS1-218ENST00000628742 GGT6Q6P531 493 aa11.07□□□□□ -0.64
SOX9-AS1-218ENST00000628742 ZNF777Q9ULD5 760 aaPredicted RBP11.07□□□□□ -0.64
SOX9-AS1-218ENST00000628742 SYNMO15061 1565 aa11.07□□□□□ -0.64
SOX9-AS1-218ENST00000628742 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
SOX9-AS1-218ENST00000628742 UGGT1Q9NYU2 1555 aa11.06□□□□□ -0.64
SOX9-AS1-218ENST00000628742 MAST1Q9Y2H9 1570 aa11.06□□□□□ -0.64
SOX9-AS1-218ENST00000628742 CAMSAP2Q08AD1 1489 aa11.06□□□□□ -0.64
SOX9-AS1-218ENST00000628742 ZC3H13Q5T200 1668 aaKnown RBP11.05□□□□□ -0.64
SOX9-AS1-218ENST00000628742 TOM1O60784 492 aa11.05□□□□□ -0.64
SOX9-AS1-218ENST00000628742 NPHP4O75161 1426 aaPredicted RBP11.05□□□□□ -0.64
SOX9-AS1-218ENST00000628742 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
SOX9-AS1-218ENST00000628742 MROH1Q8NDA8 1641 aa11.05□□□□□ -0.64
SOX9-AS1-218ENST00000628742 ARHGAP23Q9P227 1491 aa11.05□□□□□ -0.64
SOX9-AS1-218ENST00000628742 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
SOX9-AS1-218ENST00000628742 ABCC3O15438 1527 aa11.04□□□□□ -0.64
SOX9-AS1-218ENST00000628742 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
SOX9-AS1-218ENST00000628742 DSG3P32926 999 aa11.04□□□□□ -0.64
SOX9-AS1-218ENST00000628742 FBXO31Q5XUX0 539 aaPredicted RBP11.04□□□□□ -0.64
SOX9-AS1-218ENST00000628742 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
SOX9-AS1-218ENST00000628742 EIF2AK4Q9P2K8 1649 aaKnown RBP11.04□□□□□ -0.64
SOX9-AS1-218ENST00000628742 ANKLE2Q86XL3 938 aa11.03□□□□□ -0.64
SOX9-AS1-218ENST00000628742 NCOA2Q15596 1464 aa11.03□□□□□ -0.64
SOX9-AS1-218ENST00000628742 SLIT1O75093 1534 aa11.03□□□□□ -0.64
SOX9-AS1-218ENST00000628742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.03□□□□□ -0.64
SOX9-AS1-218ENST00000628742 ARHGAP31Q2M1Z3 1444 aa11.01□□□□□ -0.65
SOX9-AS1-218ENST00000628742 ERVK-7P63135 1459 aa11.01□□□□□ -0.65
SOX9-AS1-218ENST00000628742 KIF3BO15066 747 aa11□□□□□ -0.65
SOX9-AS1-218ENST00000628742 EHMT2Q96KQ7 1210 aa11□□□□□ -0.65
SOX9-AS1-218ENST00000628742 UBR1Q8IWV7 1749 aa11□□□□□ -0.65
SOX9-AS1-218ENST00000628742 KDM5AP29375 1690 aaKnown RBP10.99□□□□□ -0.65
SOX9-AS1-218ENST00000628742 WASHC2CQ9Y4E1 1318 aa10.99□□□□□ -0.65
SOX9-AS1-218ENST00000628742 PRDM15P57071 1507 aaPredicted RBP10.99□□□□□ -0.65
SOX9-AS1-218ENST00000628742 MAP3K1Q13233 1512 aa10.98□□□□□ -0.65
SOX9-AS1-218ENST00000628742 SCAF11Q99590 1463 aaKnown RBP10.97□□□□□ -0.65
SOX9-AS1-218ENST00000628742 XIRP1Q702N8 1843 aaKnown RBP10.97□□□□□ -0.65
SOX9-AS1-218ENST00000628742 FAM135BQ49AJ0 1406 aa10.96□□□□□ -0.65
SOX9-AS1-218ENST00000628742 RGS17Q9UGC6 210 aaPredicted RBP10.95□□□□□ -0.66
SOX9-AS1-218ENST00000628742 LRRC9Q6ZRR7 1453 aa10.94□□□□□ -0.66
SOX9-AS1-218ENST00000628742 ATF5Q9Y2D1 282 aaPredicted RBP10.94□□□□□ -0.66
SOX9-AS1-218ENST00000628742 LMTK2Q8IWU2 1503 aa10.94□□□□□ -0.66
SOX9-AS1-218ENST00000628742 DUOX2Q9NRD8 1548 aa10.94□□□□□ -0.66
SOX9-AS1-218ENST00000628742 TET3O43151 1660 aa10.93□□□□□ -0.66
SOX9-AS1-218ENST00000628742 ABCB7O75027 752 aa10.93□□□□□ -0.66
SOX9-AS1-218ENST00000628742 PIP4K2BP78356 416 aa10.93□□□□□ -0.66
SOX9-AS1-218ENST00000628742 ERBINQ96RT1 1412 aa10.92□□□□□ -0.66
SOX9-AS1-218ENST00000628742 LTKP29376 864 aa10.92□□□□□ -0.66
SOX9-AS1-218ENST00000628742 SRCAPQ6ZRS2 3230 aa10.92□□□□□ -0.66
SOX9-AS1-218ENST00000628742 NWD1Q149M9 1564 aa10.91□□□□□ -0.66
SOX9-AS1-218ENST00000628742 TSPY4P0CV99 314 aa10.91□□□□□ -0.66
SOX9-AS1-218ENST00000628742 TSPY10P0CW01 314 aa10.91□□□□□ -0.66
SOX9-AS1-218ENST00000628742 TMEM2Q9UHN6 1383 aa10.9□□□□□ -0.66
SOX9-AS1-218ENST00000628742 MYOM3Q5VTT5 1437 aa10.9□□□□□ -0.66
SOX9-AS1-218ENST00000628742 CEP152O94986 1710 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms