RNA–Protein interactions for RNA: ENST00000623385.3

TRIM39-RPP21-201, Transcript of TRIM39-RPP21 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM39-RPP21, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-RPP21-201ENST00000623385 RNF17Q9BXT8 1623 aaKnown RBP19.59■□□□□ 0.73
TRIM39-RPP21-201ENST00000623385 GGT6Q6P531 493 aa19.59■□□□□ 0.73
TRIM39-RPP21-201ENST00000623385 MLECQ14165 292 aa19.58■□□□□ 0.72
TRIM39-RPP21-201ENST00000623385 UNC13BO14795 1591 aa19.58■□□□□ 0.72
TRIM39-RPP21-201ENST00000623385 HRCP23327 699 aa19.57■□□□□ 0.72
TRIM39-RPP21-201ENST00000623385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.721e-6■■■■□ 21.3
TRIM39-RPP21-201ENST00000623385 PRDM15P57071 1507 aaPredicted RBP19.56■□□□□ 0.72
TRIM39-RPP21-201ENST00000623385 VWDEQ8N2E2 1590 aa19.53■□□□□ 0.72
TRIM39-RPP21-201ENST00000623385 TRIM52Q96A61 297 aa19.53■□□□□ 0.72
TRIM39-RPP21-201ENST00000623385 NUP155O75694 1391 aa19.53■□□□□ 0.72
TRIM39-RPP21-201ENST00000623385 PZPP20742 1482 aa19.52■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 KDM5DQ9BY66 1539 aa19.51■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 IQGAP3Q86VI3 1631 aa19.49■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 ABCC3O15438 1527 aa19.49■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 FAM135AQ9P2D6 1515 aa19.49■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 WASHC2CQ9Y4E1 1318 aa19.48■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 CEP152O94986 1710 aa19.46■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 KANK1Q14678 1352 aa19.46■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 MPHOSPH9Q99550 1183 aa19.46■□□□□ 0.71
TRIM39-RPP21-201ENST00000623385 LMTK2Q8IWU2 1503 aa19.46■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 CLTCQ00610 1675 aaKnown RBP19.44■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 MADDQ8WXG6 1647 aa19.43■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 DHX57Q6P158 1386 aaKnown RBP19.42■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 ZC3H13Q5T200 1668 aaKnown RBP19.42■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 TET3O43151 1660 aa19.41■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 FOXD1Q16676 465 aa19.41■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 FER1L4A9Z1Z3 1794 aa19.41■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 EFCAB6Q5THR3 1501 aa19.4■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 PKD2Q13563 968 aa19.4■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 NPATQ14207 1427 aa19.4■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 KDM4FA0A1W2PPD8 638 aa19.4■□□□□ 0.7
TRIM39-RPP21-201ENST00000623385 ZMYM3Q14202 1370 aa19.39■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 CNTLNQ9NXG0 1405 aa19.38■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 E9PCH4 1651 aa19.38■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 ESF1Q9H501 851 aaKnown RBP19.37■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 ARHGAP31Q2M1Z3 1444 aa19.37■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 CEBPAP49715 358 aaPredicted RBP19.36■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 RIMS1Q86UR5 1692 aaKnown RBP19.36■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 MROH2AA6NES4 1674 aa19.35■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 FBXO31Q5XUX0 539 aaPredicted RBP19.35■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 PLA2R1Q13018 1463 aa19.33■□□□□ 0.69
TRIM39-RPP21-201ENST00000623385 C3P01024 1663 aa19.33■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 RPRD2Q5VT52 1461 aaKnown RBP19.32■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 PTPRMP28827 1452 aa19.31■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 PTPRTO14522 1441 aa19.29■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 NOS1P29475 1434 aa19.29■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 ERVK-7P63135 1459 aa19.29■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 ANKRD30BQ9BXX2 1392 aa19.29■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 PREX1Q8TCU6 1659 aa19.28■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 SPATA31D1Q6ZQQ2 1576 aa19.27■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 SYNMO15061 1565 aa19.27■□□□□ 0.68
TRIM39-RPP21-201ENST00000623385 UGGT1Q9NYU2 1555 aa19.26■□□□□ 0.67
TRIM39-RPP21-201ENST00000623385 CFAP65Q6ZU64 1925 aaKnown RBP19.25■□□□□ 0.67
TRIM39-RPP21-201ENST00000623385 CCER1Q8TC90 406 aaPredicted RBP19.25■□□□□ 0.67
TRIM39-RPP21-201ENST00000623385 SPHKAPQ2M3C7 1700 aa19.25■□□□□ 0.67
TRIM39-RPP21-201ENST00000623385 TRPM2O94759 1503 aa19.25■□□□□ 0.67
TRIM39-RPP21-201ENST00000623385 SIN3AQ96ST3 1273 aa19.22■□□□□ 0.67
TRIM39-RPP21-201ENST00000623385 TNRQ92752 1358 aa19.21■□□□□ 0.67
TRIM39-RPP21-201ENST00000623385 CLTCL1P53675 1640 aa19.2■□□□□ 0.66
TRIM39-RPP21-201ENST00000623385 IDI1Q13907 227 aa19.2■□□□□ 0.66
TRIM39-RPP21-201ENST00000623385 PIK3C2BO00750 1634 aa19.2■□□□□ 0.66
TRIM39-RPP21-201ENST00000623385 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
TRIM39-RPP21-201ENST00000623385 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
TRIM39-RPP21-201ENST00000623385 CLSPNQ9HAW4 1339 aa19.15■□□□□ 0.66
TRIM39-RPP21-201ENST00000623385 NEUROD1Q13562 356 aa19.14■□□□□ 0.65
TRIM39-RPP21-201ENST00000623385 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.65
TRIM39-RPP21-201ENST00000623385 NLRP1Q9C000 1473 aa19.12■□□□□ 0.65
TRIM39-RPP21-201ENST00000623385 SPATA31E1Q6ZUB1 1445 aa19.12■□□□□ 0.65
TRIM39-RPP21-201ENST00000623385 TMEM131LA2VDJ0 1609 aa19.1■□□□□ 0.65
TRIM39-RPP21-201ENST00000623385 ADGRB3O60242 1522 aa19.09■□□□□ 0.65
TRIM39-RPP21-201ENST00000623385 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.65
TRIM39-RPP21-201ENST00000623385 A2ML1A8K2U0 1454 aa19.08■□□□□ 0.65
TRIM39-RPP21-201ENST00000623385 CEP170BQ9Y4F5 1589 aaPredicted RBP19.08■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 UHRF1BP1Q6BDS2 1440 aa19.06■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 UBR1Q8IWV7 1749 aa19.06■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 SETD1BQ9UPS6 1966 aaKnown RBP19.05■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 ZNF142P52746 1687 aaPredicted RBP19.05■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 KIF1BO60333 1816 aa19.05■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 MYO5BQ9ULV0 1848 aa19.05■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 NEURL4Q96JN8 1562 aa19.04■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 STAG3Q9UJ98 1225 aa19.03■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 KDM5AP29375 1690 aaKnown RBP19.03■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 LMTK3Q96Q04 1460 aa19.02■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 L3MBTL2Q969R5 705 aa19.02■□□□□ 0.64
TRIM39-RPP21-201ENST00000623385 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
TRIM39-RPP21-201ENST00000623385 TMEM2Q9UHN6 1383 aa18.99■□□□□ 0.63
TRIM39-RPP21-201ENST00000623385 NEXMIFQ5QGS0 1516 aa18.99■□□□□ 0.63
TRIM39-RPP21-201ENST00000623385 NUTM2DQ5VT03 806 aaPredicted RBP18.98■□□□□ 0.63
TRIM39-RPP21-201ENST00000623385 THEMISQ8N1K5 641 aaPredicted RBP18.98■□□□□ 0.63
TRIM39-RPP21-201ENST00000623385 ZFYVE9O95405 1425 aa18.98■□□□□ 0.63
TRIM39-RPP21-201ENST00000623385 TONSLQ96HA7 1378 aa18.98■□□□□ 0.63
TRIM39-RPP21-201ENST00000623385 ARHGAP23Q9P227 1491 aa18.98■□□□□ 0.63
TRIM39-RPP21-201ENST00000623385 SLIT1O75093 1534 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms