RNA–Protein interactions for RNA: ENST00000623385.3

TRIM39-RPP21-201, Transcript of TRIM39-RPP21 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM39-RPP21, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-RPP21-201ENST00000623385 NISCHQ9Y2I1 1504 aa31.12■■■□□ 2.57
TRIM39-RPP21-201ENST00000623385 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
TRIM39-RPP21-201ENST00000623385 ABCC9O60706 1549 aa26.46■■□□□ 1.83
TRIM39-RPP21-201ENST00000623385 ZCCHC6Q5VYS8 1495 aaKnown RBP26.02■■□□□ 1.76
TRIM39-RPP21-201ENST00000623385 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
TRIM39-RPP21-201ENST00000623385 DCAF1Q9Y4B6 1507 aa25.72■■□□□ 1.71
TRIM39-RPP21-201ENST00000623385 NACADO15069 1562 aa25.65■■□□□ 1.7
TRIM39-RPP21-201ENST00000623385 MYO15BQ96JP2 1530 aa25.65■■□□□ 1.7
TRIM39-RPP21-201ENST00000623385 RB1CC1Q8TDY2 1594 aa25.56■■□□□ 1.68
TRIM39-RPP21-201ENST00000623385 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
TRIM39-RPP21-201ENST00000623385 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
TRIM39-RPP21-201ENST00000623385 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
TRIM39-RPP21-201ENST00000623385 BICRAQ9NZM4 1560 aa24.87■■□□□ 1.57
TRIM39-RPP21-201ENST00000623385 PABPN1Q86U42 306 aaKnown RBP eCLIP24.84■■□□□ 1.57
TRIM39-RPP21-201ENST00000623385 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
TRIM39-RPP21-201ENST00000623385 EIF4G1Q04637 1599 aaKnown RBP24.14■■□□□ 1.45
TRIM39-RPP21-201ENST00000623385 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
TRIM39-RPP21-201ENST00000623385 SMARCA4P51532 1647 aa24.04■■□□□ 1.44
TRIM39-RPP21-201ENST00000623385 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
TRIM39-RPP21-201ENST00000623385 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
TRIM39-RPP21-201ENST00000623385 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
TRIM39-RPP21-201ENST00000623385 CC2D2AQ9P2K1 1620 aa23.93■■□□□ 1.42
TRIM39-RPP21-201ENST00000623385 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
TRIM39-RPP21-201ENST00000623385 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
TRIM39-RPP21-201ENST00000623385 WIZO95785 1651 aa23.79■■□□□ 1.4
TRIM39-RPP21-201ENST00000623385 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
TRIM39-RPP21-201ENST00000623385 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
TRIM39-RPP21-201ENST00000623385 SUPT5HO00267 1087 aaKnown RBP23.67■■□□□ 1.38
TRIM39-RPP21-201ENST00000623385 BAZ1BQ9UIG0 1483 aaKnown RBP23.61■■□□□ 1.37
TRIM39-RPP21-201ENST00000623385 HMGXB3Q12766 1538 aa23.6■■□□□ 1.37
TRIM39-RPP21-201ENST00000623385 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.35
TRIM39-RPP21-201ENST00000623385 CCDC88BA6NC98 1476 aa23.29■■□□□ 1.32
TRIM39-RPP21-201ENST00000623385 NESP48681 1621 aa23.06■■□□□ 1.28
TRIM39-RPP21-201ENST00000623385 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
TRIM39-RPP21-201ENST00000623385 CFTRP13569 1480 aa23.01■■□□□ 1.27
TRIM39-RPP21-201ENST00000623385 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
TRIM39-RPP21-201ENST00000623385 PDS5BQ9NTI5 1447 aa22.8■■□□□ 1.24
TRIM39-RPP21-201ENST00000623385 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
TRIM39-RPP21-201ENST00000623385 FANCD2Q9BXW9 1451 aa22.78■■□□□ 1.24
TRIM39-RPP21-201ENST00000623385 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
TRIM39-RPP21-201ENST00000623385 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
TRIM39-RPP21-201ENST00000623385 CEP164Q9UPV0 1460 aa22.69■■□□□ 1.22
TRIM39-RPP21-201ENST00000623385 ABCC8Q09428 1581 aa22.59■■□□□ 1.21
TRIM39-RPP21-201ENST00000623385 URB2Q14146 1524 aaKnown RBP22.56■■□□□ 1.2
TRIM39-RPP21-201ENST00000623385 MRC2Q9UBG0 1479 aa22.56■■□□□ 1.2
TRIM39-RPP21-201ENST00000623385 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
TRIM39-RPP21-201ENST00000623385 CUX1P39880 1505 aa22.51■■□□□ 1.19
TRIM39-RPP21-201ENST00000623385 WRNQ14191 1432 aaPredicted RBP eCLIP22.5■■□□□ 1.19
TRIM39-RPP21-201ENST00000623385 WDR62O43379 1518 aa22.48■■□□□ 1.19
TRIM39-RPP21-201ENST00000623385 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
TRIM39-RPP21-201ENST00000623385 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
TRIM39-RPP21-201ENST00000623385 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
TRIM39-RPP21-201ENST00000623385 TOP2BQ02880 1626 aa22.39■■□□□ 1.17
TRIM39-RPP21-201ENST00000623385 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
TRIM39-RPP21-201ENST00000623385 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
TRIM39-RPP21-201ENST00000623385 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
TRIM39-RPP21-201ENST00000623385 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.16
TRIM39-RPP21-201ENST00000623385 CUX2O14529 1486 aa22.31■■□□□ 1.16
TRIM39-RPP21-201ENST00000623385 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
TRIM39-RPP21-201ENST00000623385 RAD54L2Q9Y4B4 1467 aa22.25■■□□□ 1.15
TRIM39-RPP21-201ENST00000623385 SOGA1O94964 1423 aa22.23■■□□□ 1.15
TRIM39-RPP21-201ENST00000623385 TARBP1Q13395 1621 aaKnown RBP22.21■■□□□ 1.15
TRIM39-RPP21-201ENST00000623385 IFT140Q96RY7 1462 aa22.18■■□□□ 1.14
TRIM39-RPP21-201ENST00000623385 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
TRIM39-RPP21-201ENST00000623385 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
TRIM39-RPP21-201ENST00000623385 WDR97A6NE52 1622 aa22.11■■□□□ 1.13
TRIM39-RPP21-201ENST00000623385 TDRD9Q8NDG6 1382 aaKnown RBP22.09■■□□□ 1.13
TRIM39-RPP21-201ENST00000623385 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.121e-6■■■■■ 26.9
TRIM39-RPP21-201ENST00000623385 RUSC2Q8N2Y8 1516 aa22.03■■□□□ 1.12
TRIM39-RPP21-201ENST00000623385 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
TRIM39-RPP21-201ENST00000623385 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
TRIM39-RPP21-201ENST00000623385 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
TRIM39-RPP21-201ENST00000623385 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
TRIM39-RPP21-201ENST00000623385 GRIN2BQ13224 1484 aa21.89■■□□□ 1.09
TRIM39-RPP21-201ENST00000623385 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
TRIM39-RPP21-201ENST00000623385 IGF1RP08069 1367 aa21.88■■□□□ 1.09
TRIM39-RPP21-201ENST00000623385 PBRM1Q86U86 1689 aa21.87■■□□□ 1.09
TRIM39-RPP21-201ENST00000623385 ERICH3Q5RHP9 1530 aa21.84■■□□□ 1.09
TRIM39-RPP21-201ENST00000623385 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.09
TRIM39-RPP21-201ENST00000623385 EEA1Q15075 1411 aa21.82■■□□□ 1.08
TRIM39-RPP21-201ENST00000623385 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
TRIM39-RPP21-201ENST00000623385 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.07
TRIM39-RPP21-201ENST00000623385 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
TRIM39-RPP21-201ENST00000623385 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
TRIM39-RPP21-201ENST00000623385 FHAD1B1AJZ9 1412 aa21.73■■□□□ 1.07
TRIM39-RPP21-201ENST00000623385 PRXQ9BXM0 1461 aa21.71■■□□□ 1.07
TRIM39-RPP21-201ENST00000623385 CUL7Q14999 1698 aa21.71■■□□□ 1.07
TRIM39-RPP21-201ENST00000623385 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
TRIM39-RPP21-201ENST00000623385 FBLN2P98095 1184 aa21.66■■□□□ 1.06
TRIM39-RPP21-201ENST00000623385 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
TRIM39-RPP21-201ENST00000623385 RAPGEF2Q9Y4G8 1499 aa21.63■■□□□ 1.05
TRIM39-RPP21-201ENST00000623385 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
TRIM39-RPP21-201ENST00000623385 CHD1O14646 1710 aa21.62■■□□□ 1.05
TRIM39-RPP21-201ENST00000623385 KIF21BO75037 1637 aa21.6■■□□□ 1.05
TRIM39-RPP21-201ENST00000623385 EHMT2Q96KQ7 1210 aa21.59■■□□□ 1.05
TRIM39-RPP21-201ENST00000623385 CEP170Q5SW79 1584 aa21.52■■□□□ 1.04
TRIM39-RPP21-201ENST00000623385 NUP160Q12769 1436 aa21.52■■□□□ 1.04
TRIM39-RPP21-201ENST00000623385 GOLGA3Q08378 1498 aa21.51■■□□□ 1.03
TRIM39-RPP21-201ENST00000623385 LOC105371045A0A1W2PR82 267 aa21.5■■□□□ 1.03
TRIM39-RPP21-201ENST00000623385 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms