RNA–Protein interactions for RNA: ENST00000620167.1

LINC01554-203, Transcript of long intergenic non-protein coding RNA 1554, humanhuman

TSL 1 (best)

Gene LINC01554, Length 1,443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554-203ENST00000620167 KDM5DQ9BY66 1539 aa21.79■■□□□ 1.08
LINC01554-203ENST00000620167 UNC13BO14795 1591 aa21.79■■□□□ 1.08
LINC01554-203ENST00000620167 NUP155O75694 1391 aa21.77■■□□□ 1.08
LINC01554-203ENST00000620167 DEPDC5O75140 1603 aa21.76■■□□□ 1.07
LINC01554-203ENST00000620167 KIF3BO15066 747 aa21.76■■□□□ 1.07
LINC01554-203ENST00000620167 AGLP35573 1532 aa21.75■■□□□ 1.07
LINC01554-203ENST00000620167 MPHOSPH9Q99550 1183 aa21.73■■□□□ 1.07
LINC01554-203ENST00000620167 RNF17Q9BXT8 1623 aaKnown RBP21.73■■□□□ 1.07
LINC01554-203ENST00000620167 PZPP20742 1482 aa21.73■■□□□ 1.07
LINC01554-203ENST00000620167 KANK1Q14678 1352 aa21.72■■□□□ 1.07
LINC01554-203ENST00000620167 PRDM15P57071 1507 aaPredicted RBP21.72■■□□□ 1.07
LINC01554-203ENST00000620167 SLC4A1APQ9BWU0 796 aaKnown RBP21.72■■□□□ 1.07
LINC01554-203ENST00000620167 IQGAP3Q86VI3 1631 aa21.71■■□□□ 1.07
LINC01554-203ENST00000620167 FAM135AQ9P2D6 1515 aa21.69■■□□□ 1.06
LINC01554-203ENST00000620167 VWDEQ8N2E2 1590 aa21.69■■□□□ 1.06
LINC01554-203ENST00000620167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.68■■□□□ 1.06
LINC01554-203ENST00000620167 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
LINC01554-203ENST00000620167 MROH1Q8NDA8 1641 aa21.67■■□□□ 1.06
LINC01554-203ENST00000620167 SIGLEC1Q9BZZ2 1709 aa21.66■■□□□ 1.06
LINC01554-203ENST00000620167 LMTK2Q8IWU2 1503 aa21.63■■□□□ 1.05
LINC01554-203ENST00000620167 PKD2Q13563 968 aa21.63■■□□□ 1.05
LINC01554-203ENST00000620167 GGT6Q6P531 493 aa21.63■■□□□ 1.05
LINC01554-203ENST00000620167 ZEB1P37275 1124 aaPredicted RBP21.62■■□□□ 1.05
LINC01554-203ENST00000620167 TET3O43151 1660 aa21.6■■□□□ 1.05
LINC01554-203ENST00000620167 WASHC2CQ9Y4E1 1318 aa21.58■■□□□ 1.05
LINC01554-203ENST00000620167 ZC3H13Q5T200 1668 aaKnown RBP21.58■■□□□ 1.05
LINC01554-203ENST00000620167 ANKRD30BQ9BXX2 1392 aa21.57■■□□□ 1.04
LINC01554-203ENST00000620167 ABCC3O15438 1527 aa21.56■■□□□ 1.04
LINC01554-203ENST00000620167 ARID4BQ4LE39 1312 aaPredicted RBP21.55■■□□□ 1.04
LINC01554-203ENST00000620167 EFCAB6Q5THR3 1501 aa21.54■■□□□ 1.04
LINC01554-203ENST00000620167 RPRD2Q5VT52 1461 aaKnown RBP21.54■■□□□ 1.04
LINC01554-203ENST00000620167 ARHGAP31Q2M1Z3 1444 aa21.53■■□□□ 1.04
LINC01554-203ENST00000620167 FOXD1Q16676 465 aa21.52■■□□□ 1.04
LINC01554-203ENST00000620167 TIMELESSQ9UNS1 1208 aa21.52■■□□□ 1.04
LINC01554-203ENST00000620167 ADAMTSL3P82987 1691 aa21.51■■□□□ 1.03
LINC01554-203ENST00000620167 CEP152O94986 1710 aa21.51■■□□□ 1.03
LINC01554-203ENST00000620167 E9PCH4 1651 aa21.51■■□□□ 1.03
LINC01554-203ENST00000620167 CAMSAP1Q5T5Y3 1602 aa21.49■■□□□ 1.03
LINC01554-203ENST00000620167 PTPRTO14522 1441 aa21.48■■□□□ 1.03
LINC01554-203ENST00000620167 CNTLNQ9NXG0 1405 aa21.48■■□□□ 1.03
LINC01554-203ENST00000620167 ESF1Q9H501 851 aaKnown RBP21.47■■□□□ 1.03
LINC01554-203ENST00000620167 FER1L4A9Z1Z3 1794 aa21.47■■□□□ 1.03
LINC01554-203ENST00000620167 NPATQ14207 1427 aa21.46■■□□□ 1.03
LINC01554-203ENST00000620167 MLECQ14165 292 aa21.46■■□□□ 1.03
LINC01554-203ENST00000620167 SIN3AQ96ST3 1273 aa21.46■■□□□ 1.03
LINC01554-203ENST00000620167 PLA2R1Q13018 1463 aa21.45■■□□□ 1.03
LINC01554-203ENST00000620167 MADDQ8WXG6 1647 aa21.44■■□□□ 1.02
LINC01554-203ENST00000620167 TRPM2O94759 1503 aa21.43■■□□□ 1.02
LINC01554-203ENST00000620167 CCDC144AA2RUR9 1427 aa21.43■■□□□ 1.02
LINC01554-203ENST00000620167 SPHKAPQ2M3C7 1700 aa21.42■■□□□ 1.02
LINC01554-203ENST00000620167 CLTCQ00610 1675 aaKnown RBP21.41■■□□□ 1.02
LINC01554-203ENST00000620167 NEUROD1Q13562 356 aa21.41■■□□□ 1.02
LINC01554-203ENST00000620167 KDM4FA0A1W2PPD8 638 aa21.4■■□□□ 1.02
LINC01554-203ENST00000620167 MROH2AA6NES4 1674 aa21.4■■□□□ 1.02
LINC01554-203ENST00000620167 RIMS1Q86UR5 1692 aaKnown RBP21.4■■□□□ 1.02
LINC01554-203ENST00000620167 NOS1P29475 1434 aa21.4■■□□□ 1.02
LINC01554-203ENST00000620167 ZMYM3Q14202 1370 aa21.38■■□□□ 1.01
LINC01554-203ENST00000620167 TONSLQ96HA7 1378 aa21.36■■□□□ 1.01
LINC01554-203ENST00000620167 PREX1Q8TCU6 1659 aa21.33■■□□□ 1.01
LINC01554-203ENST00000620167 SLC52A1Q9NWF4 448 aa21.33■■□□□ 1.01
LINC01554-203ENST00000620167 NEURL4Q96JN8 1562 aa21.32■■□□□ 1
LINC01554-203ENST00000620167 ERVK-7P63135 1459 aa21.32■■□□□ 1
LINC01554-203ENST00000620167 SPATA31D1Q6ZQQ2 1576 aa21.32■■□□□ 1
LINC01554-203ENST00000620167 CFAP65Q6ZU64 1925 aaKnown RBP21.3■■□□□ 1
LINC01554-203ENST00000620167 CLTCL1P53675 1640 aa21.3■■□□□ 1
LINC01554-203ENST00000620167 C3P01024 1663 aa21.3■■□□□ 1
LINC01554-203ENST00000620167 SYNMO15061 1565 aa21.29■■□□□ 1
LINC01554-203ENST00000620167 FBXO31Q5XUX0 539 aaPredicted RBP21.29■■□□□ 1
LINC01554-203ENST00000620167 PIK3C2BO00750 1634 aa21.29■■□□□ 1
LINC01554-203ENST00000620167 PTPRMP28827 1452 aa21.28■■□□□ 1
LINC01554-203ENST00000620167 SPATA31E1Q6ZUB1 1445 aa21.28■■□□□ 1
LINC01554-203ENST00000620167 L3MBTL2Q969R5 705 aa21.27■■□□□ 1
LINC01554-203ENST00000620167 PPP1R15AO75807 674 aaPredicted RBP21.26■□□□□ 0.99
LINC01554-203ENST00000620167 STAC3Q96MF2 364 aa21.26■□□□□ 0.99
LINC01554-203ENST00000620167 KIF1BO60333 1816 aa21.25■□□□□ 0.99
LINC01554-203ENST00000620167 UGGT1Q9NYU2 1555 aa21.24■□□□□ 0.99
LINC01554-203ENST00000620167 IDI1Q13907 227 aa21.22■□□□□ 0.99
LINC01554-203ENST00000620167 TNRQ92752 1358 aa21.22■□□□□ 0.99
LINC01554-203ENST00000620167 SETD1BQ9UPS6 1966 aaKnown RBP21.22■□□□□ 0.99
LINC01554-203ENST00000620167 ADGRB3O60242 1522 aa21.21■□□□□ 0.99
LINC01554-203ENST00000620167 RPGRIP1LQ68CZ1 1315 aa21.19■□□□□ 0.98
LINC01554-203ENST00000620167 NLRP1Q9C000 1473 aa21.18■□□□□ 0.98
LINC01554-203ENST00000620167 CEBPAP49715 358 aaPredicted RBP21.18■□□□□ 0.98
LINC01554-203ENST00000620167 RGL3Q3MIN7 710 aa21.18■□□□□ 0.98
LINC01554-203ENST00000620167 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
LINC01554-203ENST00000620167 UHRF1BP1Q6BDS2 1440 aa21.16■□□□□ 0.98
LINC01554-203ENST00000620167 KDM5AP29375 1690 aaKnown RBP21.15■□□□□ 0.98
LINC01554-203ENST00000620167 TMEM131LA2VDJ0 1609 aa21.15■□□□□ 0.98
LINC01554-203ENST00000620167 CHGAP10645 457 aaKnown RBP21.13■□□□□ 0.97
LINC01554-203ENST00000620167 AEBP2Q6ZN18 517 aaPredicted RBP21.13■□□□□ 0.97
LINC01554-203ENST00000620167 STAG3Q9UJ98 1225 aa21.12■□□□□ 0.97
LINC01554-203ENST00000620167 ZNF326Q5BKZ1 582 aaKnown RBP21.11■□□□□ 0.97
LINC01554-203ENST00000620167 A2ML1A8K2U0 1454 aa21.1■□□□□ 0.97
LINC01554-203ENST00000620167 MYOM2P54296 1465 aa21.1■□□□□ 0.97
LINC01554-203ENST00000620167 KDM2AQ9Y2K7 1162 aa21.09■□□□□ 0.97
LINC01554-203ENST00000620167 ZFYVE9O95405 1425 aa21.09■□□□□ 0.97
LINC01554-203ENST00000620167 IFT172Q9UG01 1749 aa21.08■□□□□ 0.97
LINC01554-203ENST00000620167 PRAG1Q86YV5 1406 aa21.08■□□□□ 0.96
LINC01554-203ENST00000620167 VGFO15240 615 aaPredicted RBP21.07■□□□□ 0.96
LINC01554-203ENST00000620167 NBPF8Q3BBV2 869 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms