RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.67
SYNRG-225ENST00000619541 SHROOM2Q13796 1616 aa19.23■□□□□ 0.67
SYNRG-225ENST00000619541 NCOA1Q15788 1441 aa19.22■□□□□ 0.67
SYNRG-225ENST00000619541 ITSN2Q9NZM3 1697 aa19.21■□□□□ 0.67
SYNRG-225ENST00000619541 SLC4A1APQ9BWU0 796 aaKnown RBP19.2■□□□□ 0.66
SYNRG-225ENST00000619541 CDC42BPAQ5VT25 1732 aa19.19■□□□□ 0.66
SYNRG-225ENST00000619541 RNF123Q5XPI4 1314 aa19.18■□□□□ 0.66
SYNRG-225ENST00000619541 FRAT2O75474 233 aaPredicted RBP19.18■□□□□ 0.66
SYNRG-225ENST00000619541 RSPH6AQ9H0K4 717 aa19.16■□□□□ 0.66
SYNRG-225ENST00000619541 MS4A1P11836 297 aa19.15■□□□□ 0.66
SYNRG-225ENST00000619541 PNISRQ8TF01 805 aaKnown RBP19.15■□□□□ 0.66
SYNRG-225ENST00000619541 PKNOX2Q96KN3 472 aa19.15■□□□□ 0.66
SYNRG-225ENST00000619541 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.65
SYNRG-225ENST00000619541 ANKRD30AQ9BXX3 1397 aa19.14■□□□□ 0.65
SYNRG-225ENST00000619541 KDM5BQ9UGL1 1544 aa19.14■□□□□ 0.65
SYNRG-225ENST00000619541 TSPY4P0CV99 314 aa19.14■□□□□ 0.65
SYNRG-225ENST00000619541 TSPY10P0CW01 314 aa19.14■□□□□ 0.65
SYNRG-225ENST00000619541 ANKRD30BQ9BXX2 1392 aa19.12■□□□□ 0.65
SYNRG-225ENST00000619541 ABCC2Q92887 1545 aa19.12■□□□□ 0.65
SYNRG-225ENST00000619541 C9orf84Q5VXU9 1444 aa19.11■□□□□ 0.65
SYNRG-225ENST00000619541 RGS3P49796 1198 aa19.11■□□□□ 0.65
SYNRG-225ENST00000619541 CDCA7LQ96GN5 454 aa19.11■□□□□ 0.65
SYNRG-225ENST00000619541 CRBNQ96SW2 442 aa19.1■□□□□ 0.65
SYNRG-225ENST00000619541 ADGRL2O95490 1459 aa19.1■□□□□ 0.65
SYNRG-225ENST00000619541 ANKRD50Q9ULJ7 1429 aa19.09■□□□□ 0.65
SYNRG-225ENST00000619541 PZPP20742 1482 aa19.09■□□□□ 0.65
SYNRG-225ENST00000619541 VSIG10Q8N0Z9 540 aa19.09■□□□□ 0.65
SYNRG-225ENST00000619541 DCAF11Q8TEB1 546 aa19.09■□□□□ 0.65
SYNRG-225ENST00000619541 MBD5Q9P267 1494 aa19.08■□□□□ 0.65
SYNRG-225ENST00000619541 GLIPR1L2Q4G1C9 344 aa19.08■□□□□ 0.64
SYNRG-225ENST00000619541 PKD2Q13563 968 aa19.07■□□□□ 0.64
SYNRG-225ENST00000619541 CROCC2H7BZ55 1655 aa19.07■□□□□ 0.64
SYNRG-225ENST00000619541 TTC37Q6PGP7 1564 aa19.07■□□□□ 0.64
SYNRG-225ENST00000619541 NAP1L5Q96NT1 182 aaPredicted RBP19.06■□□□□ 0.64
SYNRG-225ENST00000619541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.06■□□□□ 0.64
SYNRG-225ENST00000619541 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
SYNRG-225ENST00000619541 CDC42BPBQ9Y5S2 1711 aa19.05■□□□□ 0.64
SYNRG-225ENST00000619541 SAMD9LQ8IVG5 1584 aa19.05■□□□□ 0.64
SYNRG-225ENST00000619541 FAM43AQ8N2R8 423 aa19.05■□□□□ 0.64
SYNRG-225ENST00000619541 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
SYNRG-225ENST00000619541 NUP155O75694 1391 aa19.04■□□□□ 0.64
SYNRG-225ENST00000619541 ARHGAP5Q13017 1502 aa19.03■□□□□ 0.64
SYNRG-225ENST00000619541 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
SYNRG-225ENST00000619541 PREX2Q70Z35 1606 aa19.01■□□□□ 0.63
SYNRG-225ENST00000619541 SHANK2Q9UPX8 1470 aa19.01■□□□□ 0.63
SYNRG-225ENST00000619541 KDM2AQ9Y2K7 1162 aa19.01■□□□□ 0.63
SYNRG-225ENST00000619541 SLKQ9H2G2 1235 aaPredicted RBP19■□□□□ 0.63
SYNRG-225ENST00000619541 SYCP2Q9BX26 1530 aa19■□□□□ 0.63
SYNRG-225ENST00000619541 CCDC141Q6ZP82 1450 aa18.99■□□□□ 0.63
SYNRG-225ENST00000619541 ZCCHC11Q5TAX3 1644 aaKnown RBP18.99■□□□□ 0.63
SYNRG-225ENST00000619541 POGKQ9P215 609 aa18.99■□□□□ 0.63
SYNRG-225ENST00000619541 DHX29Q7Z478 1369 aaKnown RBP18.99■□□□□ 0.63
SYNRG-225ENST00000619541 KIAA1107Q9UPP5 1409 aa18.98■□□□□ 0.63
SYNRG-225ENST00000619541 USP47Q96K76 1375 aa18.97■□□□□ 0.63
SYNRG-225ENST00000619541 C20orf194Q5TEA3 1177 aa18.97■□□□□ 0.63
SYNRG-225ENST00000619541 ARHGEF5Q12774 1597 aa18.97■□□□□ 0.63
SYNRG-225ENST00000619541 UHRF1BP1LA0JNW5 1464 aa18.97■□□□□ 0.63
SYNRG-225ENST00000619541 ARID4BQ4LE39 1312 aaPredicted RBP18.97■□□□□ 0.63
SYNRG-225ENST00000619541 RSPH4AQ5TD94 716 aa18.96■□□□□ 0.63
SYNRG-225ENST00000619541 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
SYNRG-225ENST00000619541 TEX14Q8IWB6 1497 aa18.95■□□□□ 0.62
SYNRG-225ENST00000619541 FAM161AQ3B820 660 aa18.95■□□□□ 0.62
SYNRG-225ENST00000619541 ARHGEF12Q9NZN5 1544 aa18.94■□□□□ 0.62
SYNRG-225ENST00000619541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.94■□□□□ 0.623e-6■■□□□ 11.4
SYNRG-225ENST00000619541 RRAGDQ9NQL2 400 aaPredicted RBP18.94■□□□□ 0.62
SYNRG-225ENST00000619541 EFCAB2Q5VUJ9 269 aa18.93■□□□□ 0.62
SYNRG-225ENST00000619541 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
SYNRG-225ENST00000619541 GZF1Q9H116 711 aaPredicted RBP18.93■□□□□ 0.62
SYNRG-225ENST00000619541 PLCH2O75038 1416 aa18.93■□□□□ 0.62
SYNRG-225ENST00000619541 MYBBP1AQ9BQG0 1328 aaKnown RBP18.92■□□□□ 0.62
SYNRG-225ENST00000619541 CC2D1BQ5T0F9 858 aaKnown RBP18.92■□□□□ 0.62
SYNRG-225ENST00000619541 ZMYND15Q9H091 742 aa18.92■□□□□ 0.62
SYNRG-225ENST00000619541 PNNQ9H307 717 aaKnown RBP18.9■□□□□ 0.62
SYNRG-225ENST00000619541 MYO5CQ9NQX4 1742 aa18.9■□□□□ 0.62
SYNRG-225ENST00000619541 SPRYD3Q8NCJ5 442 aa18.9■□□□□ 0.62
SYNRG-225ENST00000619541 HSP90AA2PQ14568 343 aaPredicted RBP18.89■□□□□ 0.62
SYNRG-225ENST00000619541 ST20-MTHFSA0A0A6YYL1 179 aa18.89■□□□□ 0.61
SYNRG-225ENST00000619541 AFAP1Q8N556 730 aa18.89■□□□□ 0.61
SYNRG-225ENST00000619541 PDE3BQ13370 1112 aa18.88■□□□□ 0.61
SYNRG-225ENST00000619541 TRAPPC8Q9Y2L5 1435 aa18.87■□□□□ 0.61
SYNRG-225ENST00000619541 RALBP1Q15311 655 aa18.87■□□□□ 0.61
SYNRG-225ENST00000619541 HSP90AA1P07900 732 aaKnown RBP18.86■□□□□ 0.61
SYNRG-225ENST00000619541 PLEKHH2Q8IVE3 1493 aa18.86■□□□□ 0.61
SYNRG-225ENST00000619541 SPATA31E1Q6ZUB1 1445 aa18.86■□□□□ 0.61
SYNRG-225ENST00000619541 NLRP13Q86W25 1043 aa18.85■□□□□ 0.61
SYNRG-225ENST00000619541 C8orf34Q49A92 452 aa18.85■□□□□ 0.61
SYNRG-225ENST00000619541 CENPQQ7L2Z9 268 aaPredicted RBP18.85■□□□□ 0.61
SYNRG-225ENST00000619541 L1TD1Q5T7N2 865 aaKnown RBP18.83■□□□□ 0.61
SYNRG-225ENST00000619541 BRD4O60885 1362 aaPredicted RBP18.83■□□□□ 0.61
SYNRG-225ENST00000619541 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
SYNRG-225ENST00000619541 WDR7Q9Y4E6 1490 aa18.83■□□□□ 0.6
SYNRG-225ENST00000619541 KDM5DQ9BY66 1539 aa18.82■□□□□ 0.6
SYNRG-225ENST00000619541 FAM135AQ9P2D6 1515 aa18.82■□□□□ 0.6
SYNRG-225ENST00000619541 BECN1Q14457 450 aa18.8■□□□□ 0.6
SYNRG-225ENST00000619541 MAST1Q9Y2H9 1570 aa18.79■□□□□ 0.6
SYNRG-225ENST00000619541 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
SYNRG-225ENST00000619541 SPAG9O60271 1321 aaKnown RBP18.79■□□□□ 0.6
SYNRG-225ENST00000619541 ABCC1P33527 1531 aa18.79■□□□□ 0.6
SYNRG-225ENST00000619541 LRPPRCP42704 1394 aaKnown RBP18.78■□□□□ 0.6
SYNRG-225ENST00000619541 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms