RNA–Protein interactions for RNA: ENST00000617847.4

DDB2-213, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-213ENST00000617847 RNF17Q9BXT8 1623 aaKnown RBP19.11■□□□□ 0.65
DDB2-213ENST00000617847 C3P01024 1663 aa19.11■□□□□ 0.65
DDB2-213ENST00000617847 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
DDB2-213ENST00000617847 ERBINQ96RT1 1412 aa19.1■□□□□ 0.65
DDB2-213ENST00000617847 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
DDB2-213ENST00000617847 CLTCQ00610 1675 aaKnown RBP19.09■□□□□ 0.65
DDB2-213ENST00000617847 SETD1BQ9UPS6 1966 aaKnown RBP19.08■□□□□ 0.65
DDB2-213ENST00000617847 ZMYM3Q14202 1370 aa19.08■□□□□ 0.64
DDB2-213ENST00000617847 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
DDB2-213ENST00000617847 MROH1Q8NDA8 1641 aa19.06■□□□□ 0.64
DDB2-213ENST00000617847 KDM5DQ9BY66 1539 aa19.06■□□□□ 0.64
DDB2-213ENST00000617847 ROCK1Q13464 1354 aa19.05■□□□□ 0.64
DDB2-213ENST00000617847 LMTK3Q96Q04 1460 aa19.04■□□□□ 0.64
DDB2-213ENST00000617847 NPATQ14207 1427 aa19.02■□□□□ 0.63
DDB2-213ENST00000617847 PRDM15P57071 1507 aaPredicted RBP19.02■□□□□ 0.63
DDB2-213ENST00000617847 DEPDC5O75140 1603 aa19.02■□□□□ 0.63
DDB2-213ENST00000617847 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
DDB2-213ENST00000617847 ZC3H13Q5T200 1668 aaKnown RBP19■□□□□ 0.63
DDB2-213ENST00000617847 ABCC3O15438 1527 aa19■□□□□ 0.63
DDB2-213ENST00000617847 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
DDB2-213ENST00000617847 PREX1Q8TCU6 1659 aa19■□□□□ 0.63
DDB2-213ENST00000617847 ITGAEP38570 1179 aa18.99■□□□□ 0.63
DDB2-213ENST00000617847 PZPP20742 1482 aa18.98■□□□□ 0.63
DDB2-213ENST00000617847 VWDEQ8N2E2 1590 aa18.96■□□□□ 0.63
DDB2-213ENST00000617847 CEP152O94986 1710 aa18.96■□□□□ 0.63
DDB2-213ENST00000617847 UHRF1BP1Q6BDS2 1440 aa18.95■□□□□ 0.62
DDB2-213ENST00000617847 LMTK2Q8IWU2 1503 aa18.93■□□□□ 0.62
DDB2-213ENST00000617847 CAMSAP1Q5T5Y3 1602 aa18.92■□□□□ 0.62
DDB2-213ENST00000617847 KANK1Q14678 1352 aa18.92■□□□□ 0.62
DDB2-213ENST00000617847 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.92■□□□□ 0.626e-7■■■□□ 16.1
DDB2-213ENST00000617847 ARHGAP31Q2M1Z3 1444 aa18.91■□□□□ 0.62
DDB2-213ENST00000617847 FBXO31Q5XUX0 539 aaPredicted RBP18.91■□□□□ 0.62
DDB2-213ENST00000617847 UNC13BO14795 1591 aa18.9■□□□□ 0.62
DDB2-213ENST00000617847 HSPA2P54652 639 aa18.9■□□□□ 0.62
DDB2-213ENST00000617847 MYO3AQ8NEV4 1616 aa18.89■□□□□ 0.62
DDB2-213ENST00000617847 SPATA31D1Q6ZQQ2 1576 aa18.88■□□□□ 0.61
DDB2-213ENST00000617847 TNRQ92752 1358 aa18.88■□□□□ 0.61
DDB2-213ENST00000617847 ZNF142P52746 1687 aaPredicted RBP18.88■□□□□ 0.61
DDB2-213ENST00000617847 NAIPQ13075 1403 aa18.88■□□□□ 0.61
DDB2-213ENST00000617847 ERVK-7P63135 1459 aa18.87■□□□□ 0.61
DDB2-213ENST00000617847 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
DDB2-213ENST00000617847 HFM1A2PYH4 1435 aa18.86■□□□□ 0.61
DDB2-213ENST00000617847 CEP170BQ9Y4F5 1589 aaPredicted RBP18.85■□□□□ 0.61
DDB2-213ENST00000617847 CFAP65Q6ZU64 1925 aaKnown RBP18.85■□□□□ 0.61
DDB2-213ENST00000617847 A2ML1A8K2U0 1454 aa18.84■□□□□ 0.61
DDB2-213ENST00000617847 EFCAB6Q5THR3 1501 aa18.84■□□□□ 0.61
DDB2-213ENST00000617847 NLRP1Q9C000 1473 aa18.83■□□□□ 0.6
DDB2-213ENST00000617847 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
DDB2-213ENST00000617847 TET3O43151 1660 aa18.82■□□□□ 0.6
DDB2-213ENST00000617847 STRCQ7RTU9 1775 aa18.8■□□□□ 0.6
DDB2-213ENST00000617847 RPRD2Q5VT52 1461 aaKnown RBP18.8■□□□□ 0.6
DDB2-213ENST00000617847 NUP155O75694 1391 aa18.79■□□□□ 0.6
DDB2-213ENST00000617847 NOS1P29475 1434 aa18.79■□□□□ 0.6
DDB2-213ENST00000617847 PLA2R1Q13018 1463 aa18.78■□□□□ 0.6
DDB2-213ENST00000617847 SYNMO15061 1565 aa18.74■□□□□ 0.59
DDB2-213ENST00000617847 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
DDB2-213ENST00000617847 E9PCH4 1651 aa18.74■□□□□ 0.59
DDB2-213ENST00000617847 THEMISQ8N1K5 641 aaPredicted RBP18.71■□□□□ 0.59
DDB2-213ENST00000617847 PTPRTO14522 1441 aa18.71■□□□□ 0.59
DDB2-213ENST00000617847 PKD2Q13563 968 aa18.71■□□□□ 0.58
DDB2-213ENST00000617847 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.58
DDB2-213ENST00000617847 UBR1Q8IWV7 1749 aa18.7■□□□□ 0.58
DDB2-213ENST00000617847 PIK3C2BO00750 1634 aa18.69■□□□□ 0.58
DDB2-213ENST00000617847 IDI1Q13907 227 aa18.69■□□□□ 0.58
DDB2-213ENST00000617847 SLC52A1Q9NWF4 448 aa18.69■□□□□ 0.58
DDB2-213ENST00000617847 KDM5AP29375 1690 aaKnown RBP18.68■□□□□ 0.58
DDB2-213ENST00000617847 NCKAP5LQ9HCH0 1330 aa18.68■□□□□ 0.58
DDB2-213ENST00000617847 SETD5Q9C0A6 1442 aa18.67■□□□□ 0.58
DDB2-213ENST00000617847 TRIM52Q96A61 297 aa18.66■□□□□ 0.58
DDB2-213ENST00000617847 ARHGAP23Q9P227 1491 aa18.65■□□□□ 0.58
DDB2-213ENST00000617847 POLR1AO95602 1720 aaPredicted RBP18.65■□□□□ 0.58
DDB2-213ENST00000617847 SLIT1O75093 1534 aa18.64■□□□□ 0.58
DDB2-213ENST00000617847 NEURL4Q96JN8 1562 aa18.64■□□□□ 0.57
DDB2-213ENST00000617847 ANKLE2Q86XL3 938 aa18.63■□□□□ 0.57
DDB2-213ENST00000617847 ACIN1Q9UKV3 1341 aaKnown RBP18.63■□□□□ 0.57
DDB2-213ENST00000617847 ADGRB3O60242 1522 aa18.63■□□□□ 0.57
DDB2-213ENST00000617847 SPHKAPQ2M3C7 1700 aa18.62■□□□□ 0.57
DDB2-213ENST00000617847 MED14O60244 1454 aa18.62■□□□□ 0.57
DDB2-213ENST00000617847 RAB3GAP2Q9H2M9 1393 aa18.6■□□□□ 0.57
DDB2-213ENST00000617847 TMEM2Q9UHN6 1383 aa18.6■□□□□ 0.57
DDB2-213ENST00000617847 SLC4A1APQ9BWU0 796 aaKnown RBP18.6■□□□□ 0.57
DDB2-213ENST00000617847 STAG3Q9UJ98 1225 aa18.6■□□□□ 0.57
DDB2-213ENST00000617847 TMEM131LA2VDJ0 1609 aa18.59■□□□□ 0.57
DDB2-213ENST00000617847 SCAF11Q99590 1463 aaKnown RBP18.58■□□□□ 0.57
DDB2-213ENST00000617847 MYO5BQ9ULV0 1848 aa18.58■□□□□ 0.56
DDB2-213ENST00000617847 LTKP29376 864 aa18.57■□□□□ 0.56
DDB2-213ENST00000617847 TRPM2O94759 1503 aa18.57■□□□□ 0.56
DDB2-213ENST00000617847 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
DDB2-213ENST00000617847 HRCP23327 699 aa18.56■□□□□ 0.56
DDB2-213ENST00000617847 MPHOSPH9Q99550 1183 aa18.56■□□□□ 0.56
DDB2-213ENST00000617847 TXNDC2Q86VQ3 553 aa18.56■□□□□ 0.56
DDB2-213ENST00000617847 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
DDB2-213ENST00000617847 CLTCL1P53675 1640 aa18.54■□□□□ 0.56
DDB2-213ENST00000617847 ZFYVE9O95405 1425 aa18.53■□□□□ 0.56
DDB2-213ENST00000617847 EID1Q9Y6B2 187 aa18.53■□□□□ 0.56
DDB2-213ENST00000617847 LTBP4Q8N2S1 1624 aa18.53■□□□□ 0.56
DDB2-213ENST00000617847 CHGAP10645 457 aaKnown RBP18.51■□□□□ 0.55
DDB2-213ENST00000617847 RIMS2Q9UQ26 1411 aa18.51■□□□□ 0.55
DDB2-213ENST00000617847 FOXD1Q16676 465 aa18.5■□□□□ 0.55
DDB2-213ENST00000617847 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms