RNA–Protein interactions for RNA: ENST00000617847.4

DDB2-213, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-213ENST00000617847 NISCHQ9Y2I1 1504 aa30.33■■■□□ 2.45
DDB2-213ENST00000617847 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.91
DDB2-213ENST00000617847 ABCC9O60706 1549 aa26.31■■□□□ 1.8
DDB2-213ENST00000617847 NACADO15069 1562 aa25.34■■□□□ 1.65
DDB2-213ENST00000617847 RB1CC1Q8TDY2 1594 aa25.34■■□□□ 1.65
DDB2-213ENST00000617847 ZCCHC6Q5VYS8 1495 aaKnown RBP25.28■■□□□ 1.64
DDB2-213ENST00000617847 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
DDB2-213ENST00000617847 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
DDB2-213ENST00000617847 DCAF1Q9Y4B6 1507 aa25.13■■□□□ 1.61
DDB2-213ENST00000617847 UNC13AQ9UPW8 1703 aa24.79■■□□□ 1.56
DDB2-213ENST00000617847 BICRAQ9NZM4 1560 aa24.61■■□□□ 1.53
DDB2-213ENST00000617847 PABPN1Q86U42 306 aaKnown RBP eCLIP24.58■■□□□ 1.53
DDB2-213ENST00000617847 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
DDB2-213ENST00000617847 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
DDB2-213ENST00000617847 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
DDB2-213ENST00000617847 EIF4G1Q04637 1599 aaKnown RBP23.93■■□□□ 1.42
DDB2-213ENST00000617847 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
DDB2-213ENST00000617847 CECR2Q9BXF3 1484 aa23.65■■□□□ 1.38
DDB2-213ENST00000617847 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
DDB2-213ENST00000617847 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
DDB2-213ENST00000617847 ATAD2BQ9ULI0 1458 aa23.41■■□□□ 1.34
DDB2-213ENST00000617847 NCAPD3P42695 1498 aa23.39■■□□□ 1.34
DDB2-213ENST00000617847 MROH2BQ7Z745 1585 aa23.37■■□□□ 1.33
DDB2-213ENST00000617847 SMARCA2P51531 1590 aa23.36■■□□□ 1.33
DDB2-213ENST00000617847 PEG3Q9GZU2 1588 aa23.32■■□□□ 1.32
DDB2-213ENST00000617847 HMGXB3Q12766 1538 aa23.27■■□□□ 1.32
DDB2-213ENST00000617847 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
DDB2-213ENST00000617847 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
DDB2-213ENST00000617847 WIZO95785 1651 aa23.11■■□□□ 1.29
DDB2-213ENST00000617847 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
DDB2-213ENST00000617847 NESP48681 1621 aa22.79■■□□□ 1.24
DDB2-213ENST00000617847 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
DDB2-213ENST00000617847 CADPSQ9ULU8 1353 aa22.7■■□□□ 1.22
DDB2-213ENST00000617847 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
DDB2-213ENST00000617847 CCDC88BA6NC98 1476 aa22.61■■□□□ 1.21
DDB2-213ENST00000617847 PDS5BQ9NTI5 1447 aa22.59■■□□□ 1.21
DDB2-213ENST00000617847 CFTRP13569 1480 aa22.58■■□□□ 1.2
DDB2-213ENST00000617847 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
DDB2-213ENST00000617847 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
DDB2-213ENST00000617847 CUX2O14529 1486 aa22.46■■□□□ 1.19
DDB2-213ENST00000617847 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
DDB2-213ENST00000617847 FANCD2Q9BXW9 1451 aa22.43■■□□□ 1.18
DDB2-213ENST00000617847 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
DDB2-213ENST00000617847 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
DDB2-213ENST00000617847 MRC2Q9UBG0 1479 aa22.36■■□□□ 1.17
DDB2-213ENST00000617847 WDR62O43379 1518 aa22.3■■□□□ 1.16
DDB2-213ENST00000617847 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
DDB2-213ENST00000617847 TOPBP1Q92547 1522 aa22.08■■□□□ 1.13
DDB2-213ENST00000617847 ABCC8Q09428 1581 aa22.08■■□□□ 1.12
DDB2-213ENST00000617847 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
DDB2-213ENST00000617847 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
DDB2-213ENST00000617847 CUX1P39880 1505 aa21.92■■□□□ 1.1
DDB2-213ENST00000617847 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.09
DDB2-213ENST00000617847 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
DDB2-213ENST00000617847 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.09
DDB2-213ENST00000617847 ZNF608Q9ULD9 1512 aaPredicted RBP21.82■■□□□ 1.08
DDB2-213ENST00000617847 SOGA1O94964 1423 aa21.79■■□□□ 1.08
DDB2-213ENST00000617847 RAD54L2Q9Y4B4 1467 aa21.78■■□□□ 1.08
DDB2-213ENST00000617847 WRNQ14191 1432 aaPredicted RBP eCLIP21.78■■□□□ 1.08
DDB2-213ENST00000617847 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
DDB2-213ENST00000617847 TOP2BQ02880 1626 aa21.74■■□□□ 1.07
DDB2-213ENST00000617847 BIVM-ERCC5R4GMW8 1640 aa21.74■■□□□ 1.07
DDB2-213ENST00000617847 EIF4G3O43432 1585 aaKnown RBP21.73■■□□□ 1.07
DDB2-213ENST00000617847 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
DDB2-213ENST00000617847 AQRO60306 1485 aaKnown RBP eCLIP21.7■■□□□ 1.062e-8■■■■□ 25.5
DDB2-213ENST00000617847 WDR97A6NE52 1622 aa21.68■■□□□ 1.06
DDB2-213ENST00000617847 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
DDB2-213ENST00000617847 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
DDB2-213ENST00000617847 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
DDB2-213ENST00000617847 GRIN2BQ13224 1484 aa21.54■■□□□ 1.04
DDB2-213ENST00000617847 GAPVD1Q14C86 1478 aa21.54■■□□□ 1.04
DDB2-213ENST00000617847 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
DDB2-213ENST00000617847 SNAPC4Q5SXM2 1469 aa21.5■■□□□ 1.03
DDB2-213ENST00000617847 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
DDB2-213ENST00000617847 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
DDB2-213ENST00000617847 CHD1O14646 1710 aa21.45■■□□□ 1.02
DDB2-213ENST00000617847 SYNJ2O15056 1496 aa21.4■■□□□ 1.02
DDB2-213ENST00000617847 ERICH3Q5RHP9 1530 aa21.38■■□□□ 1.01
DDB2-213ENST00000617847 FBLN2P98095 1184 aa21.37■■□□□ 1.01
DDB2-213ENST00000617847 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
DDB2-213ENST00000617847 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
DDB2-213ENST00000617847 KIF27Q86VH2 1401 aa21.31■■□□□ 1
DDB2-213ENST00000617847 FHAD1B1AJZ9 1412 aa21.3■■□□□ 1
DDB2-213ENST00000617847 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
DDB2-213ENST00000617847 CLASP1Q7Z460 1538 aa21.25■□□□□ 0.99
DDB2-213ENST00000617847 IGF1RP08069 1367 aa21.25■□□□□ 0.99
DDB2-213ENST00000617847 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
DDB2-213ENST00000617847 NUP160Q12769 1436 aa21.19■□□□□ 0.98
DDB2-213ENST00000617847 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
DDB2-213ENST00000617847 CUL7Q14999 1698 aa21.17■□□□□ 0.98
DDB2-213ENST00000617847 RIMBP3CA6NJZ7 1639 aa21.17■□□□□ 0.98
DDB2-213ENST00000617847 RIMBP3BA6NNM3 1639 aa21.17■□□□□ 0.98
DDB2-213ENST00000617847 RIMBP3Q9UFD9 1639 aa21.17■□□□□ 0.98
DDB2-213ENST00000617847 CEP170Q5SW79 1584 aa21.16■□□□□ 0.98
DDB2-213ENST00000617847 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.98
DDB2-213ENST00000617847 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
DDB2-213ENST00000617847 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
DDB2-213ENST00000617847 SHROOM2Q13796 1616 aa21.02■□□□□ 0.96
DDB2-213ENST00000617847 ARAP1Q96P48 1450 aa21.02■□□□□ 0.96
DDB2-213ENST00000617847 RAPGEF2Q9Y4G8 1499 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms