RNA–Protein interactions for RNA: ENST00000617051.4

PCDH15-230, Transcript of protocadherin related 15, humanhuman

TSL 5 BASIC

Gene PCDH15, Length 7,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-230ENST00000617051 VGFO15240 615 aaPredicted RBP9.8□□□□□ -0.84
PCDH15-230ENST00000617051 SYNE3Q6ZMZ3 975 aa9.8□□□□□ -0.84
PCDH15-230ENST00000617051 GBP4Q96PP9 640 aa9.8□□□□□ -0.84
PCDH15-230ENST00000617051 TPM2P07951 284 aa9.8□□□□□ -0.84
PCDH15-230ENST00000617051 COG3Q96JB2 828 aa9.79□□□□□ -0.84
PCDH15-230ENST00000617051 CECR2Q9BXF3 1484 aa9.79□□□□□ -0.84
PCDH15-230ENST00000617051 TPM3P06753 285 aa9.79□□□□□ -0.84
PCDH15-230ENST00000617051 PMFBP1Q8TBY8 1022 aa9.79□□□□□ -0.84
PCDH15-230ENST00000617051 LTV1Q96GA3 475 aaPredicted RBP9.79□□□□□ -0.84
PCDH15-230ENST00000617051 TEFQ10587 303 aa9.79□□□□□ -0.84
PCDH15-230ENST00000617051 ATF3P18847 181 aa9.78□□□□□ -0.84
PCDH15-230ENST00000617051 CCDC47Q96A33 483 aaKnown RBP9.78□□□□□ -0.84
PCDH15-230ENST00000617051 MSNP26038 577 aaKnown RBP9.78□□□□□ -0.84
PCDH15-230ENST00000617051 CPLX2Q6PUV4 134 aaKnown RBP9.77□□□□□ -0.85
PCDH15-230ENST00000617051 RBM33Q96EV2 1170 aaKnown RBP9.77□□□□□ -0.85
PCDH15-230ENST00000617051 SMARCA2P51531 1590 aa9.77□□□□□ -0.85
PCDH15-230ENST00000617051 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
PCDH15-230ENST00000617051 CCDC18Q5T9S5 1454 aa9.77□□□□□ -0.85
PCDH15-230ENST00000617051 MIER1Q8N108 512 aa9.76□□□□□ -0.85
PCDH15-230ENST00000617051 CCDC43Q96MW1 224 aaKnown RBP9.76□□□□□ -0.85
PCDH15-230ENST00000617051 TCERG1O14776 1098 aaKnown RBP9.76□□□□□ -0.85
PCDH15-230ENST00000617051 VPS37DQ86XT2 251 aa9.76□□□□□ -0.85
PCDH15-230ENST00000617051 KIF16BQ96L93 1317 aa9.76□□□□□ -0.85
PCDH15-230ENST00000617051 SLC4A10Q6U841 1118 aa9.75□□□□□ -0.85
PCDH15-230ENST00000617051 SETD5Q9C0A6 1442 aa9.75□□□□□ -0.85
PCDH15-230ENST00000617051 DDX58O95786 925 aaKnown RBP9.75□□□□□ -0.85
PCDH15-230ENST00000617051 CYB5RLQ6IPT4 315 aa9.75□□□□□ -0.85
PCDH15-230ENST00000617051 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.75□□□□□ -0.85
PCDH15-230ENST00000617051 SIN3AQ96ST3 1273 aa9.75□□□□□ -0.85
PCDH15-230ENST00000617051 FBXW7Q969H0 707 aa9.74□□□□□ -0.85
PCDH15-230ENST00000617051 SUPT16HQ9Y5B9 1047 aaKnown RBP9.74□□□□□ -0.85
PCDH15-230ENST00000617051 PHLDB1Q86UU1 1377 aa9.74□□□□□ -0.85
PCDH15-230ENST00000617051 TDRD9Q8NDG6 1382 aaKnown RBP9.74□□□□□ -0.85
PCDH15-230ENST00000617051 GOLGA6L1Q8N7Z2 621 aa9.74□□□□□ -0.85
PCDH15-230ENST00000617051 EVC2Q86UK5 1308 aa9.74□□□□□ -0.85
PCDH15-230ENST00000617051 PSME1Q06323 249 aa9.74□□□□□ -0.85
PCDH15-230ENST00000617051 TSR1Q2NL82 804 aaKnown RBP9.74□□□□□ -0.85
PCDH15-230ENST00000617051 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
PCDH15-230ENST00000617051 NAP1L5Q96NT1 182 aaPredicted RBP9.73□□□□□ -0.85
PCDH15-230ENST00000617051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.73□□□□□ -0.85
PCDH15-230ENST00000617051 CCER2I3L3R5 266 aa9.73□□□□□ -0.85
PCDH15-230ENST00000617051 RAD21O60216 631 aa9.73□□□□□ -0.85
PCDH15-230ENST00000617051 R3HCC1Q9Y3T6 440 aaKnown RBP9.72□□□□□ -0.85
PCDH15-230ENST00000617051 DHX16O60231 1041 aaKnown RBP9.72□□□□□ -0.85
PCDH15-230ENST00000617051 TPD52L1Q16890 204 aaPredicted RBP9.72□□□□□ -0.85
PCDH15-230ENST00000617051 SYTL4Q96C24 671 aaPredicted RBP9.72□□□□□ -0.85
PCDH15-230ENST00000617051 TPM1P09493 284 aa9.72□□□□□ -0.85
PCDH15-230ENST00000617051 HSPA5P11021 654 aaKnown RBP9.72□□□□□ -0.85
PCDH15-230ENST00000617051 PTPRGP23470 1445 aa9.72□□□□□ -0.85
PCDH15-230ENST00000617051 RAPGEF4Q8WZA2 1011 aa9.72□□□□□ -0.85
PCDH15-230ENST00000617051 SENP3-EIF4A1A0A087X0R7 540 aa9.71□□□□□ -0.85
PCDH15-230ENST00000617051 PDE4CQ08493 712 aa9.71□□□□□ -0.85
PCDH15-230ENST00000617051 TRIM29Q14134 588 aa9.71□□□□□ -0.85
PCDH15-230ENST00000617051 JPH4Q96JJ6 628 aa9.71□□□□□ -0.85
PCDH15-230ENST00000617051 HNRNPMP52272 730 aaKnown RBP eCLIP9.7□□□□□ -0.86
PCDH15-230ENST00000617051 CCAR1Q8IX12 1150 aaKnown RBP9.7□□□□□ -0.86
PCDH15-230ENST00000617051 MPHOSPH9Q99550 1183 aa9.7□□□□□ -0.86
PCDH15-230ENST00000617051 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
PCDH15-230ENST00000617051 WWC2Q6AWC2 1192 aa9.7□□□□□ -0.86
PCDH15-230ENST00000617051 RUFY2Q8WXA3 655 aa9.7□□□□□ -0.86
PCDH15-230ENST00000617051 NUTM2FA1L443 756 aa9.7□□□□□ -0.86
PCDH15-230ENST00000617051 ST18O60284 1047 aa9.7□□□□□ -0.86
PCDH15-230ENST00000617051 PHF14O94880 888 aa9.7□□□□□ -0.86
PCDH15-230ENST00000617051 CENPJQ9HC77 1338 aaPredicted RBP9.69□□□□□ -0.86
PCDH15-230ENST00000617051 NUTM2DQ5VT03 806 aaPredicted RBP9.69□□□□□ -0.86
PCDH15-230ENST00000617051 ATP6V1DQ9Y5K8 247 aa9.69□□□□□ -0.86
PCDH15-230ENST00000617051 H3BQV1 296 aa9.69□□□□□ -0.86
PCDH15-230ENST00000617051 FAM69CQ0P6D2 419 aa9.69□□□□□ -0.86
PCDH15-230ENST00000617051 IFFO2Q5TF58 517 aa9.69□□□□□ -0.86
PCDH15-230ENST00000617051 CREBRFQ8IUR6 639 aa9.69□□□□□ -0.86
PCDH15-230ENST00000617051 ANKRD20A12PQ8NF67 263 aa9.69□□□□□ -0.86
PCDH15-230ENST00000617051 ERICH2A1L162 156 aa9.68□□□□□ -0.86
PCDH15-230ENST00000617051 FAM184AQ8NB25 1140 aa9.68□□□□□ -0.86
PCDH15-230ENST00000617051 CADPSQ9ULU8 1353 aa9.68□□□□□ -0.86
PCDH15-230ENST00000617051 NOP58Q9Y2X3 529 aaKnown RBP9.68□□□□□ -0.86
PCDH15-230ENST00000617051 CCDC144AA2RUR9 1427 aa9.68□□□□□ -0.86
PCDH15-230ENST00000617051 TRDNQ13061 729 aa9.68□□□□□ -0.86
PCDH15-230ENST00000617051 PDE3BQ13370 1112 aa9.68□□□□□ -0.86
PCDH15-230ENST00000617051 CCDC70Q6NSX1 233 aa9.68□□□□□ -0.86
PCDH15-230ENST00000617051 C9orf78Q9NZ63 289 aaPredicted RBP9.67□□□□□ -0.86
PCDH15-230ENST00000617051 DIAPH3Q9NSV4 1193 aa9.67□□□□□ -0.86
PCDH15-230ENST00000617051 TRAK1Q9UPV9 953 aa9.67□□□□□ -0.86
PCDH15-230ENST00000617051 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
PCDH15-230ENST00000617051 HSP90AB4PQ58FF6 505 aa9.67□□□□□ -0.86
PCDH15-230ENST00000617051 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
PCDH15-230ENST00000617051 PES1O00541 588 aaKnown RBP9.66□□□□□ -0.86
PCDH15-230ENST00000617051 B4GALNT3Q6L9W6 998 aa9.66□□□□□ -0.86
PCDH15-230ENST00000617051 ROCK1Q13464 1354 aa9.66□□□□□ -0.86
PCDH15-230ENST00000617051 STAC3Q96MF2 364 aa9.66□□□□□ -0.86
PCDH15-230ENST00000617051 HOOK1Q9UJC3 728 aaKnown RBP9.66□□□□□ -0.86
PCDH15-230ENST00000617051 RCAN3Q9UKA8 241 aa9.66□□□□□ -0.86
PCDH15-230ENST00000617051 IPO7O95373 1038 aaKnown RBP9.66□□□□□ -0.86
PCDH15-230ENST00000617051 NLRP13Q86W25 1043 aa9.66□□□□□ -0.86
PCDH15-230ENST00000617051 WDHD1O75717 1129 aaPredicted RBP9.65□□□□□ -0.86
PCDH15-230ENST00000617051 ZKSCAN1P17029 563 aaPredicted RBP9.65□□□□□ -0.86
PCDH15-230ENST00000617051 CPLX1O14810 134 aa9.65□□□□□ -0.87
PCDH15-230ENST00000617051 VPS8Q8N3P4 1428 aa9.65□□□□□ -0.87
PCDH15-230ENST00000617051 IFIT2P09913 472 aaKnown RBP9.64□□□□□ -0.87
PCDH15-230ENST00000617051 G3BP1Q13283 466 aaKnown RBP eCLIP9.64□□□□□ -0.87
PCDH15-230ENST00000617051 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.64□□□□□ -0.872e-6■■■■■ 96.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms