RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 AKNAQ7Z591 1439 aa17.24■□□□□ 0.35
PPP4R3B-206ENST00000616407 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
PPP4R3B-206ENST00000616407 UGGT2Q9NYU1 1516 aa17.24■□□□□ 0.35
PPP4R3B-206ENST00000616407 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
PPP4R3B-206ENST00000616407 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
PPP4R3B-206ENST00000616407 NBR1Q14596 966 aa17.23■□□□□ 0.35
PPP4R3B-206ENST00000616407 MAPK8IP3Q9UPT6 1336 aa17.22■□□□□ 0.35
PPP4R3B-206ENST00000616407 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
PPP4R3B-206ENST00000616407 NUP153P49790 1475 aaKnown RBP17.21■□□□□ 0.35
PPP4R3B-206ENST00000616407 UPF2Q9HAU5 1272 aaKnown RBP17.2■□□□□ 0.34
PPP4R3B-206ENST00000616407 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
PPP4R3B-206ENST00000616407 CFAP43Q8NDM7 1665 aa17.19■□□□□ 0.34
PPP4R3B-206ENST00000616407 GPATCH8Q9UKJ3 1502 aaKnown RBP17.19■□□□□ 0.34
PPP4R3B-206ENST00000616407 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
PPP4R3B-206ENST00000616407 LAS1LQ9Y4W2 734 aaKnown RBP17.17■□□□□ 0.34
PPP4R3B-206ENST00000616407 PDE3BQ13370 1112 aa17.17■□□□□ 0.34
PPP4R3B-206ENST00000616407 RGS3P49796 1198 aa17.16■□□□□ 0.34
PPP4R3B-206ENST00000616407 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
PPP4R3B-206ENST00000616407 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
PPP4R3B-206ENST00000616407 PLEKHH2Q8IVE3 1493 aa17.16■□□□□ 0.34
PPP4R3B-206ENST00000616407 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
PPP4R3B-206ENST00000616407 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
PPP4R3B-206ENST00000616407 CCDC141Q6ZP82 1450 aa17.15■□□□□ 0.34
PPP4R3B-206ENST00000616407 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
PPP4R3B-206ENST00000616407 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.34
PPP4R3B-206ENST00000616407 SCAPERQ9BY12 1400 aa17.15■□□□□ 0.34
PPP4R3B-206ENST00000616407 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
PPP4R3B-206ENST00000616407 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
PPP4R3B-206ENST00000616407 ATP10BO94823 1461 aa17.14■□□□□ 0.33
PPP4R3B-206ENST00000616407 GOLGA2Q08379 1002 aa17.13■□□□□ 0.33
PPP4R3B-206ENST00000616407 VGFO15240 615 aaPredicted RBP17.13■□□□□ 0.33
PPP4R3B-206ENST00000616407 CFAP70Q5T0N1 1121 aa17.13■□□□□ 0.33
PPP4R3B-206ENST00000616407 STAC3Q96MF2 364 aa17.13■□□□□ 0.33
PPP4R3B-206ENST00000616407 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
PPP4R3B-206ENST00000616407 RPRD2Q5VT52 1461 aaKnown RBP17.13■□□□□ 0.33
PPP4R3B-206ENST00000616407 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
PPP4R3B-206ENST00000616407 KIF14Q15058 1648 aa17.12■□□□□ 0.33
PPP4R3B-206ENST00000616407 WDR62O43379 1518 aa17.11■□□□□ 0.33
PPP4R3B-206ENST00000616407 KIAA0556O60303 1618 aa17.1■□□□□ 0.33
PPP4R3B-206ENST00000616407 ZBTB7CA1YPR0 619 aa17.1■□□□□ 0.33
PPP4R3B-206ENST00000616407 TCOF1Q13428 1488 aaKnown RBP17.09■□□□□ 0.33
PPP4R3B-206ENST00000616407 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
PPP4R3B-206ENST00000616407 DISP1Q96F81 1524 aa17.08■□□□□ 0.32
PPP4R3B-206ENST00000616407 FAM69CQ0P6D2 419 aa17.08■□□□□ 0.32
PPP4R3B-206ENST00000616407 TMEM132EQ6IEE7 984 aa17.08■□□□□ 0.32
PPP4R3B-206ENST00000616407 SOX12O15370 315 aa17.07■□□□□ 0.32
PPP4R3B-206ENST00000616407 PLIN1O60240 522 aa17.07■□□□□ 0.32
PPP4R3B-206ENST00000616407 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
PPP4R3B-206ENST00000616407 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
PPP4R3B-206ENST00000616407 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
PPP4R3B-206ENST00000616407 CENPJQ9HC77 1338 aaPredicted RBP17.06■□□□□ 0.32
PPP4R3B-206ENST00000616407 PNNQ9H307 717 aaKnown RBP17.05■□□□□ 0.32
PPP4R3B-206ENST00000616407 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
PPP4R3B-206ENST00000616407 PNISRQ8TF01 805 aaKnown RBP17.05■□□□□ 0.32
PPP4R3B-206ENST00000616407 APAF1O14727 1248 aa17.04■□□□□ 0.32
PPP4R3B-206ENST00000616407 RRP7AQ9Y3A4 280 aaKnown RBP17.04■□□□□ 0.32
PPP4R3B-206ENST00000616407 TARBP1Q13395 1621 aaKnown RBP17.04■□□□□ 0.32
PPP4R3B-206ENST00000616407 RRP1P56182 461 aaKnown RBP17.04■□□□□ 0.32
PPP4R3B-206ENST00000616407 EXOC6Q8TAG9 804 aa17.04■□□□□ 0.32
PPP4R3B-206ENST00000616407 RAPGEF3O95398 923 aa17.03■□□□□ 0.32
PPP4R3B-206ENST00000616407 MYH16Q9H6N6 1097 aa17.03■□□□□ 0.32
PPP4R3B-206ENST00000616407 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
PPP4R3B-206ENST00000616407 HSP90AA1P07900 732 aaKnown RBP17.03■□□□□ 0.32
PPP4R3B-206ENST00000616407 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
PPP4R3B-206ENST00000616407 MINK1Q8N4C8 1332 aaPredicted RBP17.03■□□□□ 0.32
PPP4R3B-206ENST00000616407 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
PPP4R3B-206ENST00000616407 NOP58Q9Y2X3 529 aaKnown RBP17.02■□□□□ 0.31
PPP4R3B-206ENST00000616407 ADAMTS8Q9UP79 889 aa17.01■□□□□ 0.31
PPP4R3B-206ENST00000616407 MAGI3Q5TCQ9 1506 aa17.01■□□□□ 0.31
PPP4R3B-206ENST00000616407 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
PPP4R3B-206ENST00000616407 CGNL1Q0VF96 1302 aa17■□□□□ 0.31
PPP4R3B-206ENST00000616407 NUP160Q12769 1436 aa16.99■□□□□ 0.31
PPP4R3B-206ENST00000616407 MS4A1P11836 297 aa16.98■□□□□ 0.31
PPP4R3B-206ENST00000616407 CDCA7LQ96GN5 454 aa16.98■□□□□ 0.31
PPP4R3B-206ENST00000616407 TCERG1O14776 1098 aaKnown RBP16.98■□□□□ 0.31
PPP4R3B-206ENST00000616407 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
PPP4R3B-206ENST00000616407 PPP2R1AP30153 589 aa16.96■□□□□ 0.31
PPP4R3B-206ENST00000616407 ERBINQ96RT1 1412 aa16.96■□□□□ 0.31
PPP4R3B-206ENST00000616407 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.3
PPP4R3B-206ENST00000616407 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
PPP4R3B-206ENST00000616407 CRBNQ96SW2 442 aa16.95■□□□□ 0.3
PPP4R3B-206ENST00000616407 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
PPP4R3B-206ENST00000616407 E9PSI1 815 aa16.92■□□□□ 0.3
PPP4R3B-206ENST00000616407 BECN1Q14457 450 aa16.92■□□□□ 0.3
PPP4R3B-206ENST00000616407 SLC12A5Q9H2X9 1139 aa16.92■□□□□ 0.3
PPP4R3B-206ENST00000616407 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
PPP4R3B-206ENST00000616407 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
PPP4R3B-206ENST00000616407 ADGRL1O94910 1474 aa16.9■□□□□ 0.3
PPP4R3B-206ENST00000616407 PLCH2O75038 1416 aa16.89■□□□□ 0.29
PPP4R3B-206ENST00000616407 SMC4Q9NTJ3 1288 aa16.89■□□□□ 0.29
PPP4R3B-206ENST00000616407 CD109Q6YHK3 1445 aa16.89■□□□□ 0.29
PPP4R3B-206ENST00000616407 EID1Q9Y6B2 187 aa16.89■□□□□ 0.29
PPP4R3B-206ENST00000616407 GGNBP2Q9H3C7 697 aa16.88■□□□□ 0.29
PPP4R3B-206ENST00000616407 SYCP2Q9BX26 1530 aa16.88■□□□□ 0.29
PPP4R3B-206ENST00000616407 CEP170Q5SW79 1584 aa16.88■□□□□ 0.29
PPP4R3B-206ENST00000616407 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
PPP4R3B-206ENST00000616407 PZPP20742 1482 aa16.87■□□□□ 0.29
PPP4R3B-206ENST00000616407 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
PPP4R3B-206ENST00000616407 MTHFSP49914 203 aa16.87■□□□□ 0.29
PPP4R3B-206ENST00000616407 ITPRIPQ8IWB1 547 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms