RNA–Protein interactions for RNA: ENST00000616382.4

FMR1-215, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-215ENST00000616382 SHANK2Q9UPX8 1470 aa21.36■■□□□ 1.01
FMR1-215ENST00000616382 FBXO41Q8TF61 875 aa21.36■■□□□ 1.01
FMR1-215ENST00000616382 TCOF1Q13428 1488 aaKnown RBP21.34■■□□□ 1.01
FMR1-215ENST00000616382 PTPRTO14522 1441 aa21.33■■□□□ 1.01
FMR1-215ENST00000616382 ABCC5O15440 1437 aa21.33■■□□□ 1.01
FMR1-215ENST00000616382 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1
FMR1-215ENST00000616382 ITGAEP38570 1179 aa21.33■■□□□ 1
FMR1-215ENST00000616382 EIF2AK4Q9P2K8 1649 aaKnown RBP21.32■■□□□ 1
FMR1-215ENST00000616382 STRCQ7RTU9 1775 aa21.31■■□□□ 1
FMR1-215ENST00000616382 DAPK1P53355 1430 aa21.31■■□□□ 1
FMR1-215ENST00000616382 NCOA1Q15788 1441 aa21.31■■□□□ 1
FMR1-215ENST00000616382 PZPP20742 1482 aa21.3■■□□□ 1
FMR1-215ENST00000616382 KIF15Q9NS87 1388 aa21.3■■□□□ 1
FMR1-215ENST00000616382 CHIC2Q9UKJ5 165 aa21.29■■□□□ 1
FMR1-215ENST00000616382 RNF17Q9BXT8 1623 aaKnown RBP21.29■■□□□ 1
FMR1-215ENST00000616382 PKD2Q13563 968 aa21.29■■□□□ 1
FMR1-215ENST00000616382 TNRQ92752 1358 aa21.28■■□□□ 1
FMR1-215ENST00000616382 DNMT1P26358 1616 aaKnown RBP21.28■■□□□ 1
FMR1-215ENST00000616382 MYO3AQ8NEV4 1616 aa21.28■■□□□ 1
FMR1-215ENST00000616382 ZNF142P52746 1687 aaPredicted RBP21.27■■□□□ 1
FMR1-215ENST00000616382 ANKRD30AQ9BXX3 1397 aa21.27■■□□□ 1
FMR1-215ENST00000616382 CEP170BQ9Y4F5 1589 aaPredicted RBP21.27■■□□□ 1
FMR1-215ENST00000616382 ERBINQ96RT1 1412 aa21.27■■□□□ 1
FMR1-215ENST00000616382 CERKQ8TCT0 537 aa21.27■■□□□ 1
FMR1-215ENST00000616382 RRP7BPQ9NSQ0 103 aa21.27■■□□□ 1
FMR1-215ENST00000616382 CAMSAP1Q5T5Y3 1602 aa21.27■■□□□ 1
FMR1-215ENST00000616382 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
FMR1-215ENST00000616382 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
FMR1-215ENST00000616382 CROCC2H7BZ55 1655 aa21.26■□□□□ 0.99
FMR1-215ENST00000616382 FBXO31Q5XUX0 539 aaPredicted RBP21.26■□□□□ 0.99
FMR1-215ENST00000616382 ZC3H13Q5T200 1668 aaKnown RBP21.24■□□□□ 0.99
FMR1-215ENST00000616382 RRBP1Q9P2E9 1410 aaKnown RBP21.24■□□□□ 0.99
FMR1-215ENST00000616382 ABCC3O15438 1527 aa21.23■□□□□ 0.99
FMR1-215ENST00000616382 NLRP1Q9C000 1473 aa21.21■□□□□ 0.99
FMR1-215ENST00000616382 KANK1Q14678 1352 aa21.2■□□□□ 0.98
FMR1-215ENST00000616382 NCKAP5LQ9HCH0 1330 aa21.2■□□□□ 0.98
FMR1-215ENST00000616382 THEMISQ8N1K5 641 aaPredicted RBP21.2■□□□□ 0.98
FMR1-215ENST00000616382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.17■□□□□ 0.98
FMR1-215ENST00000616382 MROH1Q8NDA8 1641 aa21.17■□□□□ 0.98
FMR1-215ENST00000616382 ADGRL2O95490 1459 aa21.17■□□□□ 0.98
FMR1-215ENST00000616382 PRDM15P57071 1507 aaPredicted RBP21.16■□□□□ 0.98
FMR1-215ENST00000616382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.15■□□□□ 0.988e-7■■□□□ 12.1
FMR1-215ENST00000616382 ARHGAP31Q2M1Z3 1444 aa21.15■□□□□ 0.98
FMR1-215ENST00000616382 SPATA31D1Q6ZQQ2 1576 aa21.14■□□□□ 0.98
FMR1-215ENST00000616382 ANKLE2Q86XL3 938 aa21.14■□□□□ 0.97
FMR1-215ENST00000616382 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
FMR1-215ENST00000616382 UGGT1Q9NYU2 1555 aa21.12■□□□□ 0.97
FMR1-215ENST00000616382 DEPDC5O75140 1603 aa21.11■□□□□ 0.97
FMR1-215ENST00000616382 CEP152O94986 1710 aa21.1■□□□□ 0.97
FMR1-215ENST00000616382 IQSEC2Q5JU85 1478 aa21.09■□□□□ 0.97
FMR1-215ENST00000616382 ANKRD50Q9ULJ7 1429 aa21.08■□□□□ 0.97
FMR1-215ENST00000616382 LTBP4Q8N2S1 1624 aa21.08■□□□□ 0.96
FMR1-215ENST00000616382 LMTK2Q8IWU2 1503 aa21.08■□□□□ 0.96
FMR1-215ENST00000616382 ROCK1Q13464 1354 aa21.06■□□□□ 0.96
FMR1-215ENST00000616382 VWDEQ8N2E2 1590 aa21.04■□□□□ 0.96
FMR1-215ENST00000616382 ZNF335Q9H4Z2 1342 aaPredicted RBP21.03■□□□□ 0.96
FMR1-215ENST00000616382 POLR1AO95602 1720 aaPredicted RBP21.03■□□□□ 0.96
FMR1-215ENST00000616382 MED14O60244 1454 aa21.02■□□□□ 0.96
FMR1-215ENST00000616382 CFAP65Q6ZU64 1925 aaKnown RBP21.01■□□□□ 0.95
FMR1-215ENST00000616382 NPHP4O75161 1426 aaPredicted RBP21■□□□□ 0.95
FMR1-215ENST00000616382 STAG3Q9UJ98 1225 aa21■□□□□ 0.95
FMR1-215ENST00000616382 NEURL4Q96JN8 1562 aa20.99■□□□□ 0.95
FMR1-215ENST00000616382 SLC52A1Q9NWF4 448 aa20.97■□□□□ 0.95
FMR1-215ENST00000616382 EID1Q9Y6B2 187 aa20.97■□□□□ 0.95
FMR1-215ENST00000616382 RPRD2Q5VT52 1461 aaKnown RBP20.97■□□□□ 0.95
FMR1-215ENST00000616382 EFCAB6Q5THR3 1501 aa20.97■□□□□ 0.95
FMR1-215ENST00000616382 TRIM26Q12899 539 aaPredicted RBP20.96■□□□□ 0.95
FMR1-215ENST00000616382 UBR1Q8IWV7 1749 aa20.95■□□□□ 0.94
FMR1-215ENST00000616382 NOS1P29475 1434 aa20.95■□□□□ 0.94
FMR1-215ENST00000616382 IDI1Q13907 227 aa20.94■□□□□ 0.94
FMR1-215ENST00000616382 TXNDC2Q86VQ3 553 aa20.94■□□□□ 0.94
FMR1-215ENST00000616382 CPS1P31327 1500 aa20.94■□□□□ 0.94
FMR1-215ENST00000616382 SLIT1O75093 1534 aa20.93■□□□□ 0.94
FMR1-215ENST00000616382 SCAF11Q99590 1463 aaKnown RBP20.93■□□□□ 0.94
FMR1-215ENST00000616382 ARHGAP23Q9P227 1491 aa20.93■□□□□ 0.94
FMR1-215ENST00000616382 NAIPQ13075 1403 aa20.93■□□□□ 0.94
FMR1-215ENST00000616382 UNC13BO14795 1591 aa20.91■□□□□ 0.94
FMR1-215ENST00000616382 KDM5AP29375 1690 aaKnown RBP20.91■□□□□ 0.94
FMR1-215ENST00000616382 IQGAP1P46940 1657 aa20.91■□□□□ 0.94
FMR1-215ENST00000616382 TET3O43151 1660 aa20.9■□□□□ 0.94
FMR1-215ENST00000616382 TMEM2Q9UHN6 1383 aa20.9■□□□□ 0.94
FMR1-215ENST00000616382 PIK3C2BO00750 1634 aa20.89■□□□□ 0.94
FMR1-215ENST00000616382 UBAP1LF5GYI3 381 aa20.89■□□□□ 0.93
FMR1-215ENST00000616382 LTKP29376 864 aa20.89■□□□□ 0.93
FMR1-215ENST00000616382 HFM1A2PYH4 1435 aa20.89■□□□□ 0.93
FMR1-215ENST00000616382 NUP155O75694 1391 aa20.87■□□□□ 0.93
FMR1-215ENST00000616382 SYNMO15061 1565 aa20.87■□□□□ 0.93
FMR1-215ENST00000616382 HDGFP51858 240 aaKnown RBP20.86■□□□□ 0.93
FMR1-215ENST00000616382 GCC2Q8IWJ2 1684 aa20.86■□□□□ 0.93
FMR1-215ENST00000616382 TOM1O60784 492 aa20.84■□□□□ 0.93
FMR1-215ENST00000616382 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
FMR1-215ENST00000616382 ADGRB3O60242 1522 aa20.83■□□□□ 0.93
FMR1-215ENST00000616382 IQGAP3Q86VI3 1631 aa20.83■□□□□ 0.93
FMR1-215ENST00000616382 SETD5Q9C0A6 1442 aa20.83■□□□□ 0.92
FMR1-215ENST00000616382 PCGF6Q9BYE7 350 aa20.82■□□□□ 0.92
FMR1-215ENST00000616382 RAB3GAP2Q9H2M9 1393 aa20.79■□□□□ 0.92
FMR1-215ENST00000616382 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.78■□□□□ 0.92
FMR1-215ENST00000616382 E9PCH4 1651 aa20.77■□□□□ 0.91
FMR1-215ENST00000616382 PPP1R15AO75807 674 aaPredicted RBP20.75■□□□□ 0.91
FMR1-215ENST00000616382 CHGAP10645 457 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms