RNA–Protein interactions for RNA: ENST00000616377.4

GTF2IP1-204, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 2 BASIC

Gene GTF2IP1, Length 2,632 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-204ENST00000616377 CDC42BPAQ5VT25 1732 aa32.1■■■□□ 2.73
GTF2IP1-204ENST00000616377 CEP170Q5SW79 1584 aa32.09■■■□□ 2.73
GTF2IP1-204ENST00000616377 KDM5DQ9BY66 1539 aa32.09■■■□□ 2.73
GTF2IP1-204ENST00000616377 SHANK2Q9UPX8 1470 aa32.08■■■□□ 2.73
GTF2IP1-204ENST00000616377 RTL5Q5HYW3 569 aaPredicted RBP32.07■■■□□ 2.72
GTF2IP1-204ENST00000616377 NPM2Q86SE8 214 aaKnown RBP32.06■■■□□ 2.72
GTF2IP1-204ENST00000616377 NLRP13Q86W25 1043 aa32.06■■■□□ 2.72
GTF2IP1-204ENST00000616377 TCERG1O14776 1098 aaKnown RBP32.06■■■□□ 2.72
GTF2IP1-204ENST00000616377 PARD3Q8TEW0 1356 aa32.04■■■□□ 2.72
GTF2IP1-204ENST00000616377 TSPY4P0CV99 314 aa32.02■■■□□ 2.72
GTF2IP1-204ENST00000616377 TSPY10P0CW01 314 aa32.02■■■□□ 2.72
GTF2IP1-204ENST00000616377 PTPRGP23470 1445 aa32.02■■■□□ 2.72
GTF2IP1-204ENST00000616377 ABCC10Q5T3U5 1492 aa32.01■■■□□ 2.72
GTF2IP1-204ENST00000616377 PDE4AP27815 886 aa32.01■■■□□ 2.72
GTF2IP1-204ENST00000616377 PLEKHD1A6NEE1 506 aa32.01■■■□□ 2.71
GTF2IP1-204ENST00000616377 PDE3BQ13370 1112 aa32.01■■■□□ 2.71
GTF2IP1-204ENST00000616377 CDCA7LQ96GN5 454 aa32■■■□□ 2.71
GTF2IP1-204ENST00000616377 CHMP7Q8WUX9 453 aaPredicted RBP31.98■■■□□ 2.71
GTF2IP1-204ENST00000616377 PER1O15534 1290 aaPredicted RBP31.97■■■□□ 2.71
GTF2IP1-204ENST00000616377 HNRNPMP52272 730 aaKnown RBP eCLIP31.96■■■□□ 2.71
GTF2IP1-204ENST00000616377 BACH2Q9BYV9 841 aa31.96■■■□□ 2.71
GTF2IP1-204ENST00000616377 MAGI1Q96QZ7 1491 aaPredicted RBP31.95■■■□□ 2.71
GTF2IP1-204ENST00000616377 CARMIL2Q6F5E8 1435 aa31.95■■■□□ 2.71
GTF2IP1-204ENST00000616377 JPH4Q96JJ6 628 aa31.94■■■□□ 2.7
GTF2IP1-204ENST00000616377 PRAG1Q86YV5 1406 aa31.93■■■□□ 2.7
GTF2IP1-204ENST00000616377 NBPF1Q3BBV0 1214 aa31.93■■■□□ 2.7
GTF2IP1-204ENST00000616377 TRPM1Q7Z4N2 1603 aa31.92■■■□□ 2.7
GTF2IP1-204ENST00000616377 MS4A1P11836 297 aa31.91■■■□□ 2.7
GTF2IP1-204ENST00000616377 FBLN2P98095 1184 aa31.91■■■□□ 2.7
GTF2IP1-204ENST00000616377 ATP10BO94823 1461 aa31.91■■■□□ 2.7
GTF2IP1-204ENST00000616377 PLIN1O60240 522 aa31.91■■■□□ 2.7
GTF2IP1-204ENST00000616377 FAM135AQ9P2D6 1515 aa31.89■■■□□ 2.69
GTF2IP1-204ENST00000616377 ABCA8O94911 1581 aa31.88■■■□□ 2.69
GTF2IP1-204ENST00000616377 CC2D1BQ5T0F9 858 aaKnown RBP31.88■■■□□ 2.69
GTF2IP1-204ENST00000616377 SYNJ2O15056 1496 aa31.88■■■□□ 2.69
GTF2IP1-204ENST00000616377 RGL3Q3MIN7 710 aa31.87■■■□□ 2.69
GTF2IP1-204ENST00000616377 LAS1LQ9Y4W2 734 aaKnown RBP31.86■■■□□ 2.69
GTF2IP1-204ENST00000616377 CCDC144AA2RUR9 1427 aa31.85■■■□□ 2.69
GTF2IP1-204ENST00000616377 ARHGEF5Q12774 1597 aa31.84■■■□□ 2.69
GTF2IP1-204ENST00000616377 BLMP54132 1417 aaPredicted RBP31.82■■■□□ 2.69
GTF2IP1-204ENST00000616377 DISP3Q9P2K9 1392 aa31.82■■■□□ 2.69
GTF2IP1-204ENST00000616377 SKAP1Q86WV1 359 aa31.82■■■□□ 2.69
GTF2IP1-204ENST00000616377 COL17A1Q9UMD9 1497 aaPredicted RBP31.82■■■□□ 2.68
GTF2IP1-204ENST00000616377 CRBNQ96SW2 442 aa31.81■■■□□ 2.68
GTF2IP1-204ENST00000616377 GPRASP1Q5JY77 1395 aa31.81■■■□□ 2.68
GTF2IP1-204ENST00000616377 TESK2Q96S53 571 aa31.8■■■□□ 2.68
GTF2IP1-204ENST00000616377 NUP160Q12769 1436 aa31.79■■■□□ 2.68
GTF2IP1-204ENST00000616377 WASHC2CQ9Y4E1 1318 aa31.79■■■□□ 2.68
GTF2IP1-204ENST00000616377 NEFMP07197 916 aa31.79■■■□□ 2.68
GTF2IP1-204ENST00000616377 PANK3Q9H999 370 aa31.79■■■□□ 2.68
GTF2IP1-204ENST00000616377 A2MP01023 1474 aa31.77■■■□□ 2.68
GTF2IP1-204ENST00000616377 PLA2R1Q13018 1463 aa31.77■■■□□ 2.68
GTF2IP1-204ENST00000616377 INSRP06213 1382 aa31.76■■■□□ 2.68
GTF2IP1-204ENST00000616377 CCDC141Q6ZP82 1450 aa31.76■■■□□ 2.67
GTF2IP1-204ENST00000616377 PRDM15P57071 1507 aaPredicted RBP31.74■■■□□ 2.67
GTF2IP1-204ENST00000616377 SAMD9LQ8IVG5 1584 aa31.73■■■□□ 2.67
GTF2IP1-204ENST00000616377 ZMYM4Q5VZL5 1548 aa31.73■■■□□ 2.67
GTF2IP1-204ENST00000616377 ERBINQ96RT1 1412 aa31.72■■■□□ 2.67
GTF2IP1-204ENST00000616377 USP35Q9P2H5 1018 aa31.71■■■□□ 2.67
GTF2IP1-204ENST00000616377 C20orf194Q5TEA3 1177 aa31.7■■■□□ 2.67
GTF2IP1-204ENST00000616377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.69■■■□□ 2.66
GTF2IP1-204ENST00000616377 LAMC1P11047 1609 aa31.69■■■□□ 2.66
GTF2IP1-204ENST00000616377 CDC42BPBQ9Y5S2 1711 aa31.66■■■□□ 2.66
GTF2IP1-204ENST00000616377 PLEKHH2Q8IVE3 1493 aa31.66■■■□□ 2.66
GTF2IP1-204ENST00000616377 PPM1GO15355 546 aaPredicted RBP31.65■■■□□ 2.66
GTF2IP1-204ENST00000616377 ADAMTS8Q9UP79 889 aa31.65■■■□□ 2.66
GTF2IP1-204ENST00000616377 TMF1P82094 1093 aa31.65■■■□□ 2.66
GTF2IP1-204ENST00000616377 IL27Q8NEV9 243 aa31.64■■■□□ 2.66
GTF2IP1-204ENST00000616377 RSPH4AQ5TD94 716 aa31.63■■■□□ 2.65
GTF2IP1-204ENST00000616377 UNC13BO14795 1591 aa31.62■■■□□ 2.65
GTF2IP1-204ENST00000616377 PREX2Q70Z35 1606 aa31.62■■■□□ 2.65
GTF2IP1-204ENST00000616377 MYO5CQ9NQX4 1742 aa31.61■■■□□ 2.65
GTF2IP1-204ENST00000616377 KDM2BQ8NHM5 1336 aa31.61■■■□□ 2.65
GTF2IP1-204ENST00000616377 DDRGK1Q96HY6 314 aa31.61■■■□□ 2.65
GTF2IP1-204ENST00000616377 SYCP2Q9BX26 1530 aa31.58■■■□□ 2.65
GTF2IP1-204ENST00000616377 EIF2AK4Q9P2K8 1649 aaKnown RBP31.57■■■□□ 2.65
GTF2IP1-204ENST00000616377 PLEKHH1Q9ULM0 1364 aa31.56■■■□□ 2.64
GTF2IP1-204ENST00000616377 DUSP27Q5VZP5 1158 aa31.55■■■□□ 2.64
GTF2IP1-204ENST00000616377 MAGI2Q86UL8 1455 aa31.53■■■□□ 2.64
GTF2IP1-204ENST00000616377 IQGAP3Q86VI3 1631 aa31.52■■■□□ 2.64
GTF2IP1-204ENST00000616377 PPP2R1AP30153 589 aa31.52■■■□□ 2.64
GTF2IP1-204ENST00000616377 CENPQQ7L2Z9 268 aaPredicted RBP31.51■■■□□ 2.64
GTF2IP1-204ENST00000616377 MAST1Q9Y2H9 1570 aa31.51■■■□□ 2.63
GTF2IP1-204ENST00000616377 SLC4A3P48751 1232 aa31.5■■■□□ 2.63
GTF2IP1-204ENST00000616377 WDR7Q9Y4E6 1490 aa31.5■■■□□ 2.63
GTF2IP1-204ENST00000616377 WDR43Q15061 677 aaKnown RBP eCLIP31.48■■■□□ 2.63
GTF2IP1-204ENST00000616377 ZNF521Q96K83 1311 aa31.48■■■□□ 2.63
GTF2IP1-204ENST00000616377 KNSTRNQ9Y448 316 aa31.47■■■□□ 2.63
GTF2IP1-204ENST00000616377 ARHGAP5Q13017 1502 aa31.47■■■□□ 2.63
GTF2IP1-204ENST00000616377 RTN4Q9NQC3 1192 aaKnown RBP31.46■■■□□ 2.63
GTF2IP1-204ENST00000616377 RNF17Q9BXT8 1623 aaKnown RBP31.46■■■□□ 2.63
GTF2IP1-204ENST00000616377 ATP10AO60312 1499 aa31.46■■■□□ 2.63
GTF2IP1-204ENST00000616377 CHD1O14646 1710 aa31.45■■■□□ 2.63
GTF2IP1-204ENST00000616377 AMER1Q5JTC6 1135 aaPredicted RBP31.45■■■□□ 2.62
GTF2IP1-204ENST00000616377 GOLGA2Q08379 1002 aa31.44■■■□□ 2.62
GTF2IP1-204ENST00000616377 TTC37Q6PGP7 1564 aa31.44■■■□□ 2.62
GTF2IP1-204ENST00000616377 C8orf34Q49A92 452 aa31.44■■■□□ 2.62
GTF2IP1-204ENST00000616377 NFKBIBQ15653 356 aa31.43■■■□□ 2.62
GTF2IP1-204ENST00000616377 FAM161AQ3B820 660 aa31.42■■■□□ 2.62
GTF2IP1-204ENST00000616377 PLXNC1O60486 1568 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms