RNA–Protein interactions for RNA: ENST00000613245.4

TSPEAR-203, Transcript of thrombospondin type laminin G domain and EAR repeats, humanhuman

TSL 1 (best) BASIC

Gene TSPEAR, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPEAR-203ENST00000613245 CTTNBP2Q8WZ74 1663 aa16.54■□□□□ 0.24
TSPEAR-203ENST00000613245 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
TSPEAR-203ENST00000613245 APAF1O14727 1248 aa16.53■□□□□ 0.24
TSPEAR-203ENST00000613245 CCDC144AA2RUR9 1427 aa16.53■□□□□ 0.24
TSPEAR-203ENST00000613245 MLECQ14165 292 aa16.52■□□□□ 0.23
TSPEAR-203ENST00000613245 DHX29Q7Z478 1369 aaKnown RBP16.51■□□□□ 0.23
TSPEAR-203ENST00000613245 DENND4BO75064 1496 aaPredicted RBP16.51■□□□□ 0.23
TSPEAR-203ENST00000613245 HECW1Q76N89 1606 aa16.51■□□□□ 0.23
TSPEAR-203ENST00000613245 SLC24A1O60721 1099 aa16.51■□□□□ 0.23
TSPEAR-203ENST00000613245 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
TSPEAR-203ENST00000613245 PPM1GO15355 546 aaPredicted RBP16.5■□□□□ 0.23
TSPEAR-203ENST00000613245 IQGAP2Q13576 1575 aa16.5■□□□□ 0.23
TSPEAR-203ENST00000613245 LAMC3Q9Y6N6 1575 aa16.49■□□□□ 0.23
TSPEAR-203ENST00000613245 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
TSPEAR-203ENST00000613245 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
TSPEAR-203ENST00000613245 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
TSPEAR-203ENST00000613245 BACH2Q9BYV9 841 aa16.48■□□□□ 0.23
TSPEAR-203ENST00000613245 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
TSPEAR-203ENST00000613245 GGT6Q6P531 493 aa16.47■□□□□ 0.23
TSPEAR-203ENST00000613245 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
TSPEAR-203ENST00000613245 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
TSPEAR-203ENST00000613245 BCAR3O75815 825 aa16.46■□□□□ 0.23
TSPEAR-203ENST00000613245 BRD4O60885 1362 aaPredicted RBP16.46■□□□□ 0.23
TSPEAR-203ENST00000613245 ARHGEF11O15085 1522 aa16.46■□□□□ 0.23
TSPEAR-203ENST00000613245 TROQ12816 1431 aaPredicted RBP16.45■□□□□ 0.22
TSPEAR-203ENST00000613245 C9orf84Q5VXU9 1444 aa16.45■□□□□ 0.22
TSPEAR-203ENST00000613245 KDM5BQ9UGL1 1544 aa16.44■□□□□ 0.22
TSPEAR-203ENST00000613245 TEX14Q8IWB6 1497 aa16.44■□□□□ 0.22
TSPEAR-203ENST00000613245 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
TSPEAR-203ENST00000613245 ROCK1Q13464 1354 aa16.43■□□□□ 0.22
TSPEAR-203ENST00000613245 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
TSPEAR-203ENST00000613245 PANK1Q8TE04 598 aa16.42■□□□□ 0.22
TSPEAR-203ENST00000613245 UBE2Q2Q8WVN8 375 aa16.42■□□□□ 0.22
TSPEAR-203ENST00000613245 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
TSPEAR-203ENST00000613245 GZF1Q9H116 711 aaPredicted RBP16.42■□□□□ 0.22
TSPEAR-203ENST00000613245 SAMD9Q5K651 1589 aa16.42■□□□□ 0.22
TSPEAR-203ENST00000613245 KIF3BO15066 747 aa16.42■□□□□ 0.22
TSPEAR-203ENST00000613245 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
TSPEAR-203ENST00000613245 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
TSPEAR-203ENST00000613245 TRAK1Q9UPV9 953 aa16.41■□□□□ 0.22
TSPEAR-203ENST00000613245 U2SURPO15042 1029 aaKnown RBP16.41■□□□□ 0.22
TSPEAR-203ENST00000613245 NFKBIBQ15653 356 aa16.41■□□□□ 0.22
TSPEAR-203ENST00000613245 SPATA31E1Q6ZUB1 1445 aa16.4■□□□□ 0.22
TSPEAR-203ENST00000613245 DISP3Q9P2K9 1392 aa16.4■□□□□ 0.22
TSPEAR-203ENST00000613245 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
TSPEAR-203ENST00000613245 PZPP20742 1482 aa16.4■□□□□ 0.22
TSPEAR-203ENST00000613245 FRAT2O75474 233 aaPredicted RBP16.39■□□□□ 0.21
TSPEAR-203ENST00000613245 UPF2Q9HAU5 1272 aaKnown RBP16.39■□□□□ 0.21
TSPEAR-203ENST00000613245 TCOF1Q13428 1488 aaKnown RBP16.38■□□□□ 0.21
TSPEAR-203ENST00000613245 PTPRGP23470 1445 aa16.38■□□□□ 0.21
TSPEAR-203ENST00000613245 MORC1Q86VD1 984 aa16.38■□□□□ 0.21
TSPEAR-203ENST00000613245 STK26Q9P289 416 aa16.38■□□□□ 0.21
TSPEAR-203ENST00000613245 GPATCH8Q9UKJ3 1502 aaKnown RBP16.38■□□□□ 0.21
TSPEAR-203ENST00000613245 CFAP70Q5T0N1 1121 aa16.37■□□□□ 0.21
TSPEAR-203ENST00000613245 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
TSPEAR-203ENST00000613245 CDCA8Q53HL2 280 aa16.35■□□□□ 0.21
TSPEAR-203ENST00000613245 ARID4BQ4LE39 1312 aaPredicted RBP16.35■□□□□ 0.21
TSPEAR-203ENST00000613245 FTSJ3Q8IY81 847 aaKnown RBP16.35■□□□□ 0.21
TSPEAR-203ENST00000613245 STAG3Q9UJ98 1225 aa16.35■□□□□ 0.21
TSPEAR-203ENST00000613245 LRRIQ1Q96JM4 1722 aa16.34■□□□□ 0.21
TSPEAR-203ENST00000613245 GSE1Q14687 1217 aa16.34■□□□□ 0.21
TSPEAR-203ENST00000613245 CENPQQ7L2Z9 268 aaPredicted RBP16.34■□□□□ 0.21
TSPEAR-203ENST00000613245 MRC2Q9UBG0 1479 aa16.34■□□□□ 0.21
TSPEAR-203ENST00000613245 U2AF1L5P0DN76 240 aaPredicted RBP16.33■□□□□ 0.21
TSPEAR-203ENST00000613245 U2AF1Q01081 240 aaKnown RBP eCLIP16.33■□□□□ 0.21
TSPEAR-203ENST00000613245 KIAA0586Q9BVV6 1533 aa16.33■□□□□ 0.21
TSPEAR-203ENST00000613245 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
TSPEAR-203ENST00000613245 MS4A1P11836 297 aa16.32■□□□□ 0.2
TSPEAR-203ENST00000613245 WDR62O43379 1518 aa16.32■□□□□ 0.2
TSPEAR-203ENST00000613245 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
TSPEAR-203ENST00000613245 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
TSPEAR-203ENST00000613245 KIF21AQ7Z4S6 1674 aa16.31■□□□□ 0.2
TSPEAR-203ENST00000613245 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
TSPEAR-203ENST00000613245 SPAG9O60271 1321 aaKnown RBP16.31■□□□□ 0.2
TSPEAR-203ENST00000613245 CENPJQ9HC77 1338 aaPredicted RBP16.31■□□□□ 0.2
TSPEAR-203ENST00000613245 EFCAB2Q5VUJ9 269 aa16.31■□□□□ 0.2
TSPEAR-203ENST00000613245 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
TSPEAR-203ENST00000613245 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
TSPEAR-203ENST00000613245 TESK2Q96S53 571 aa16.28■□□□□ 0.2
TSPEAR-203ENST00000613245 BECN1Q14457 450 aa16.28■□□□□ 0.2
TSPEAR-203ENST00000613245 DUSP27Q5VZP5 1158 aa16.28■□□□□ 0.2
TSPEAR-203ENST00000613245 TARBP1Q13395 1621 aaKnown RBP16.28■□□□□ 0.2
TSPEAR-203ENST00000613245 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
TSPEAR-203ENST00000613245 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
TSPEAR-203ENST00000613245 GRIN2AQ12879 1464 aa16.27■□□□□ 0.19
TSPEAR-203ENST00000613245 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.19
TSPEAR-203ENST00000613245 TNNQ9UQP3 1299 aa16.27■□□□□ 0.19
TSPEAR-203ENST00000613245 BCORL1Q5H9F3 1711 aa16.26■□□□□ 0.19
TSPEAR-203ENST00000613245 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
TSPEAR-203ENST00000613245 DISP1Q96F81 1524 aa16.26■□□□□ 0.19
TSPEAR-203ENST00000613245 PLEKHH1Q9ULM0 1364 aa16.25■□□□□ 0.19
TSPEAR-203ENST00000613245 ELL2O00472 640 aaPredicted RBP16.25■□□□□ 0.19
TSPEAR-203ENST00000613245 KIF14Q15058 1648 aa16.24■□□□□ 0.19
TSPEAR-203ENST00000613245 GCC2Q8IWJ2 1684 aa16.24■□□□□ 0.19
TSPEAR-203ENST00000613245 SRPK2P78362 688 aaKnown RBP16.24■□□□□ 0.19
TSPEAR-203ENST00000613245 IGHDP01880 384 aa16.24■□□□□ 0.19
TSPEAR-203ENST00000613245 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
TSPEAR-203ENST00000613245 ARHGAP5Q13017 1502 aa16.23■□□□□ 0.19
TSPEAR-203ENST00000613245 PLEKHH2Q8IVE3 1493 aa16.23■□□□□ 0.19
TSPEAR-203ENST00000613245 PKNOX2Q96KN3 472 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms