RNA–Protein interactions for RNA: ENST00000613242.4

E2F3-203, Transcript of E2F transcription factor 3, humanhuman

TSL 5 BASIC

Gene E2F3, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3-203ENST00000613242 TPRNQ4KMQ1 711 aa15.54■□□□□ 0.08
E2F3-203ENST00000613242 TULP1O00294 542 aaPredicted RBP15.54■□□□□ 0.08
E2F3-203ENST00000613242 NAIPQ13075 1403 aa15.54■□□□□ 0.08
E2F3-203ENST00000613242 C20orf194Q5TEA3 1177 aa15.53■□□□□ 0.08
E2F3-203ENST00000613242 PLCB2Q00722 1185 aa15.53■□□□□ 0.08
E2F3-203ENST00000613242 NUP155O75694 1391 aa15.53■□□□□ 0.08
E2F3-203ENST00000613242 RBM10P98175 930 aaKnown RBP15.52■□□□□ 0.07
E2F3-203ENST00000613242 DDX49Q9Y6V7 483 aaKnown RBP15.52■□□□□ 0.07
E2F3-203ENST00000613242 CALD1Q05682 793 aaKnown RBP15.51■□□□□ 0.07
E2F3-203ENST00000613242 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.51■□□□□ 0.07
E2F3-203ENST00000613242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.51■□□□□ 0.072e-10■■■■□ 19.3
E2F3-203ENST00000613242 MCM4P33991 863 aa15.51■□□□□ 0.07
E2F3-203ENST00000613242 SKOR2Q2VWA4 1001 aaPredicted RBP15.5■□□□□ 0.07
E2F3-203ENST00000613242 GRPEL1Q9HAV7 217 aa15.5■□□□□ 0.07
E2F3-203ENST00000613242 RRAGDQ9NQL2 400 aaPredicted RBP15.5■□□□□ 0.07
E2F3-203ENST00000613242 APAF1O14727 1248 aa15.49■□□□□ 0.07
E2F3-203ENST00000613242 BCL2L13Q9BXK5 485 aa15.49■□□□□ 0.07
E2F3-203ENST00000613242 R3HCC1Q9Y3T6 440 aaKnown RBP15.49■□□□□ 0.07
E2F3-203ENST00000613242 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
E2F3-203ENST00000613242 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
E2F3-203ENST00000613242 ADAMTS8Q9UP79 889 aa15.49■□□□□ 0.07
E2F3-203ENST00000613242 CASKIN1Q8WXD9 1431 aa15.49■□□□□ 0.07
E2F3-203ENST00000613242 KIAA1211Q6ZU35 1233 aa15.48■□□□□ 0.07
E2F3-203ENST00000613242 TOP2BQ02880 1626 aa15.48■□□□□ 0.07
E2F3-203ENST00000613242 RNF123Q5XPI4 1314 aa15.47■□□□□ 0.07
E2F3-203ENST00000613242 C22orf23Q9BZE7 217 aa15.47■□□□□ 0.07
E2F3-203ENST00000613242 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
E2F3-203ENST00000613242 PANK1Q8TE04 598 aa15.47■□□□□ 0.07
E2F3-203ENST00000613242 E9PSI1 815 aa15.46■□□□□ 0.07
E2F3-203ENST00000613242 CLCN1P35523 988 aa15.46■□□□□ 0.07
E2F3-203ENST00000613242 MAP3K1Q13233 1512 aa15.46■□□□□ 0.07
E2F3-203ENST00000613242 NASPP49321 788 aaPredicted RBP15.45■□□□□ 0.06
E2F3-203ENST00000613242 ITPRIPQ8IWB1 547 aa15.45■□□□□ 0.06
E2F3-203ENST00000613242 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
E2F3-203ENST00000613242 KIAA2012Q0VF49 1180 aa15.45■□□□□ 0.06
E2F3-203ENST00000613242 FYCO1Q9BQS8 1478 aa15.45■□□□□ 0.06
E2F3-203ENST00000613242 CUX1P39880 1505 aa15.44■□□□□ 0.06
E2F3-203ENST00000613242 CHAF1AQ13111 956 aaPredicted RBP15.44■□□□□ 0.06
E2F3-203ENST00000613242 PANK2Q9BZ23 570 aa15.44■□□□□ 0.06
E2F3-203ENST00000613242 XRCC6P12956 609 aaKnown RBP eCLIP15.44■□□□□ 0.06
E2F3-203ENST00000613242 CFTRP13569 1480 aa15.43■□□□□ 0.06
E2F3-203ENST00000613242 PLEKHD1A6NEE1 506 aa15.43■□□□□ 0.06
E2F3-203ENST00000613242 BCAR3O75815 825 aa15.42■□□□□ 0.06
E2F3-203ENST00000613242 ANKRD30AQ9BXX3 1397 aa15.41■□□□□ 0.06
E2F3-203ENST00000613242 RRP7AQ9Y3A4 280 aaKnown RBP15.41■□□□□ 0.06
E2F3-203ENST00000613242 C8orf34Q49A92 452 aa15.41■□□□□ 0.06
E2F3-203ENST00000613242 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
E2F3-203ENST00000613242 EIF3AQ14152 1382 aaKnown RBP15.41■□□□□ 0.06
E2F3-203ENST00000613242 ISY1Q9ULR0 285 aaKnown RBP15.41■□□□□ 0.06
E2F3-203ENST00000613242 CASC1Q6TDU7 716 aa15.4■□□□□ 0.06
E2F3-203ENST00000613242 MIA2Q96PC5 1412 aa15.4■□□□□ 0.06
E2F3-203ENST00000613242 ZNF644Q9H582 1327 aaPredicted RBP15.39■□□□□ 0.05
E2F3-203ENST00000613242 SMC4Q9NTJ3 1288 aa15.39■□□□□ 0.05
E2F3-203ENST00000613242 MORC1Q86VD1 984 aa15.38■□□□□ 0.05
E2F3-203ENST00000613242 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
E2F3-203ENST00000613242 CCDC173Q0VFZ6 552 aa15.38■□□□□ 0.05
E2F3-203ENST00000613242 TBC1D2Q9BYX2 928 aa15.38■□□□□ 0.05
E2F3-203ENST00000613242 U2SURPO15042 1029 aaKnown RBP15.37■□□□□ 0.05
E2F3-203ENST00000613242 TDRD9Q8NDG6 1382 aaKnown RBP15.37■□□□□ 0.05
E2F3-203ENST00000613242 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■■□□ 18
E2F3-203ENST00000613242 CSPP1Q1MSJ5 1256 aa15.36■□□□□ 0.05
E2F3-203ENST00000613242 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
E2F3-203ENST00000613242 MTERF4Q7Z6M4 381 aaKnown RBP15.36■□□□□ 0.05
E2F3-203ENST00000613242 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
E2F3-203ENST00000613242 PTPRKQ15262 1439 aa15.35■□□□□ 0.05
E2F3-203ENST00000613242 ANKRD30BQ9BXX2 1392 aa15.34■□□□□ 0.05
E2F3-203ENST00000613242 FOXD4L5Q5VV16 416 aaPredicted RBP15.34■□□□□ 0.05
E2F3-203ENST00000613242 ZSCAN30Q86W11 494 aa15.34■□□□□ 0.05
E2F3-203ENST00000613242 FOXD4L4Q8WXT5 416 aaPredicted RBP15.34■□□□□ 0.05
E2F3-203ENST00000613242 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
E2F3-203ENST00000613242 PDE3AQ14432 1141 aa15.33■□□□□ 0.05
E2F3-203ENST00000613242 U2AF1L5P0DN76 240 aaPredicted RBP15.33■□□□□ 0.04
E2F3-203ENST00000613242 U2AF1Q01081 240 aaKnown RBP eCLIP15.33■□□□□ 0.04
E2F3-203ENST00000613242 CHMP4BQ9H444 224 aaKnown RBP15.33■□□□□ 0.04
E2F3-203ENST00000613242 ZKSCAN2Q63HK3 967 aa15.32■□□□□ 0.04
E2F3-203ENST00000613242 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
E2F3-203ENST00000613242 UQCRHLA0A096LP55 91 aa15.32■□□□□ 0.04
E2F3-203ENST00000613242 UQCRHP07919 91 aa15.32■□□□□ 0.04
E2F3-203ENST00000613242 MCTP1Q6DN14 999 aa15.31■□□□□ 0.04
E2F3-203ENST00000613242 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
E2F3-203ENST00000613242 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
E2F3-203ENST00000613242 CAVIN1Q6NZI2 390 aaKnown RBP15.3■□□□□ 0.04
E2F3-203ENST00000613242 PRDM10Q9NQV6 1147 aa15.29■□□□□ 0.04
E2F3-203ENST00000613242 DHX29Q7Z478 1369 aaKnown RBP15.29■□□□□ 0.04
E2F3-203ENST00000613242 APBB1O00213 710 aa15.28■□□□□ 0.04
E2F3-203ENST00000613242 LNPKQ9C0E8 428 aa15.28■□□□□ 0.04
E2F3-203ENST00000613242 RPRD2Q5VT52 1461 aaKnown RBP15.28■□□□□ 0.04
E2F3-203ENST00000613242 DUSP27Q5VZP5 1158 aa15.28■□□□□ 0.04
E2F3-203ENST00000613242 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
E2F3-203ENST00000613242 CCDC144AA2RUR9 1427 aa15.28■□□□□ 0.04
E2F3-203ENST00000613242 RNF214Q8ND24 703 aa15.28■□□□□ 0.04
E2F3-203ENST00000613242 IGHDP01880 384 aa15.27■□□□□ 0.04
E2F3-203ENST00000613242 SLFN5Q08AF3 891 aa15.27■□□□□ 0.04
E2F3-203ENST00000613242 NBPF1Q3BBV0 1214 aa15.27■□□□□ 0.04
E2F3-203ENST00000613242 ANKRD45Q5TZF3 282 aa15.27■□□□□ 0.04
E2F3-203ENST00000613242 HAP1P54257 671 aaPredicted RBP15.27■□□□□ 0.03
E2F3-203ENST00000613242 AAMPQ13685 434 aa15.26■□□□□ 0.03
E2F3-203ENST00000613242 ZNF771Q7L3S4 317 aaPredicted RBP15.26■□□□□ 0.03
E2F3-203ENST00000613242 CFAP44Q96MT7 982 aa15.26■□□□□ 0.03
E2F3-203ENST00000613242 TAOK2Q9UL54 1235 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms