RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 BCL2L13Q9BXK5 485 aa15.78■□□□□ 0.12
TNFAIP3-206ENST00000612899 FGD6Q6ZV73 1430 aa15.77■□□□□ 0.12
TNFAIP3-206ENST00000612899 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.12
TNFAIP3-206ENST00000612899 SLC4A10Q6U841 1118 aa15.77■□□□□ 0.11
TNFAIP3-206ENST00000612899 ELL2O00472 640 aaPredicted RBP15.76■□□□□ 0.11
TNFAIP3-206ENST00000612899 VGFO15240 615 aaPredicted RBP15.76■□□□□ 0.11
TNFAIP3-206ENST00000612899 AMPHP49418 695 aa15.76■□□□□ 0.11
TNFAIP3-206ENST00000612899 RSPH6AQ9H0K4 717 aa15.76■□□□□ 0.11
TNFAIP3-206ENST00000612899 MFAP1P55081 439 aaKnown RBP15.76■□□□□ 0.11
TNFAIP3-206ENST00000612899 MYOM3Q5VTT5 1437 aa15.75■□□□□ 0.11
TNFAIP3-206ENST00000612899 CFAP44Q96MT7 982 aa15.75■□□□□ 0.11
TNFAIP3-206ENST00000612899 KIAA1211Q6ZU35 1233 aa15.75■□□□□ 0.11
TNFAIP3-206ENST00000612899 KIF21BO75037 1637 aa15.74■□□□□ 0.11
TNFAIP3-206ENST00000612899 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■■□ 23.4
TNFAIP3-206ENST00000612899 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
TNFAIP3-206ENST00000612899 APAF1O14727 1248 aa15.73■□□□□ 0.11
TNFAIP3-206ENST00000612899 NCAPD3P42695 1498 aa15.73■□□□□ 0.11
TNFAIP3-206ENST00000612899 MINK1Q8N4C8 1332 aaPredicted RBP15.73■□□□□ 0.11
TNFAIP3-206ENST00000612899 TULP1O00294 542 aaPredicted RBP15.73■□□□□ 0.11
TNFAIP3-206ENST00000612899 ZBED9Q6R2W3 1325 aa15.72■□□□□ 0.11
TNFAIP3-206ENST00000612899 EXOC6Q8TAG9 804 aa15.72■□□□□ 0.11
TNFAIP3-206ENST00000612899 GZF1Q9H116 711 aaPredicted RBP15.72■□□□□ 0.11
TNFAIP3-206ENST00000612899 IPO9Q96P70 1041 aaKnown RBP15.71■□□□□ 0.11
TNFAIP3-206ENST00000612899 CGNL1Q0VF96 1302 aa15.7■□□□□ 0.1
TNFAIP3-206ENST00000612899 LMOD3Q0VAK6 560 aa15.7■□□□□ 0.1
TNFAIP3-206ENST00000612899 EVC2Q86UK5 1308 aa15.7■□□□□ 0.1
TNFAIP3-206ENST00000612899 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
TNFAIP3-206ENST00000612899 ANO8Q9HCE9 1232 aaPredicted RBP15.7■□□□□ 0.1
TNFAIP3-206ENST00000612899 UACAQ9BZF9 1416 aa15.69■□□□□ 0.1
TNFAIP3-206ENST00000612899 KIF7Q2M1P5 1343 aa15.69■□□□□ 0.1
TNFAIP3-206ENST00000612899 HMMRO75330 724 aa15.69■□□□□ 0.1
TNFAIP3-206ENST00000612899 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
TNFAIP3-206ENST00000612899 TRIM6-TRIM34B2RNG4 842 aa15.68■□□□□ 0.1
TNFAIP3-206ENST00000612899 CHMP4AQ9BY43 222 aa15.68■□□□□ 0.1
TNFAIP3-206ENST00000612899 RRP1P56182 461 aaKnown RBP15.68■□□□□ 0.1
TNFAIP3-206ENST00000612899 ARAP1Q96P48 1450 aa15.67■□□□□ 0.1
TNFAIP3-206ENST00000612899 COG6Q9Y2V7 657 aa15.67■□□□□ 0.1
TNFAIP3-206ENST00000612899 E9PSI1 815 aa15.66■□□□□ 0.1
TNFAIP3-206ENST00000612899 L1TD1Q5T7N2 865 aaKnown RBP15.66■□□□□ 0.1
TNFAIP3-206ENST00000612899 GBP4Q96PP9 640 aa15.66■□□□□ 0.1
TNFAIP3-206ENST00000612899 CRBNQ96SW2 442 aa15.66■□□□□ 0.1
TNFAIP3-206ENST00000612899 COG3Q96JB2 828 aa15.66■□□□□ 0.1
TNFAIP3-206ENST00000612899 CHMP3Q9Y3E7 222 aa15.66■□□□□ 0.1
TNFAIP3-206ENST00000612899 CCDC7Q96M83 1385 aa15.65■□□□□ 0.1
TNFAIP3-206ENST00000612899 ANKRD50Q9ULJ7 1429 aa15.65■□□□□ 0.1
TNFAIP3-206ENST00000612899 UBE2Q2Q8WVN8 375 aa15.64■□□□□ 0.09
TNFAIP3-206ENST00000612899 NCOA2Q15596 1464 aa15.63■□□□□ 0.09
TNFAIP3-206ENST00000612899 AFAP1Q8N556 730 aa15.63■□□□□ 0.09
TNFAIP3-206ENST00000612899 FOXD4L1Q9NU39 408 aa15.63■□□□□ 0.09
TNFAIP3-206ENST00000612899 PDE4AP27815 886 aa15.63■□□□□ 0.09
TNFAIP3-206ENST00000612899 CASKIN1Q8WXD9 1431 aa15.63■□□□□ 0.09
TNFAIP3-206ENST00000612899 ZKSCAN2Q63HK3 967 aa15.62■□□□□ 0.09
TNFAIP3-206ENST00000612899 CENPQQ7L2Z9 268 aaPredicted RBP15.62■□□□□ 0.09
TNFAIP3-206ENST00000612899 GORABQ5T7V8 394 aa15.62■□□□□ 0.09
TNFAIP3-206ENST00000612899 NOL8Q76FK4 1167 aaKnown RBP15.61■□□□□ 0.09
TNFAIP3-206ENST00000612899 WASHC2AQ641Q2 1341 aa15.61■□□□□ 0.09
TNFAIP3-206ENST00000612899 NRDCO43847 1150 aa15.61■□□□□ 0.09
TNFAIP3-206ENST00000612899 HSP90AA2PQ14568 343 aaPredicted RBP15.61■□□□□ 0.09
TNFAIP3-206ENST00000612899 HDAC5Q9UQL6 1122 aa15.6■□□□□ 0.09
TNFAIP3-206ENST00000612899 GOLGA6L6A8MZA4 724 aa15.6■□□□□ 0.09
TNFAIP3-206ENST00000612899 MSNP26038 577 aaKnown RBP15.6■□□□□ 0.09
TNFAIP3-206ENST00000612899 SLC4A3P48751 1232 aa15.6■□□□□ 0.09
TNFAIP3-206ENST00000612899 ANKRD45Q5TZF3 282 aa15.59■□□□□ 0.09
TNFAIP3-206ENST00000612899 CUX1P39880 1505 aa15.59■□□□□ 0.09
TNFAIP3-206ENST00000612899 GNL2Q13823 731 aaKnown RBP15.59■□□□□ 0.09
TNFAIP3-206ENST00000612899 TMEM132EQ6IEE7 984 aa15.59■□□□□ 0.09
TNFAIP3-206ENST00000612899 ISY1Q9ULR0 285 aaKnown RBP15.59■□□□□ 0.09
TNFAIP3-206ENST00000612899 DIAPH1O60610 1272 aaKnown RBP15.59■□□□□ 0.09
TNFAIP3-206ENST00000612899 CCDC9Q9Y3X0 531 aaKnown RBP15.59■□□□□ 0.09
TNFAIP3-206ENST00000612899 SYNJ1O43426 1573 aa15.59■□□□□ 0.09
TNFAIP3-206ENST00000612899 TAF7LQ5H9L4 462 aa15.58■□□□□ 0.09
TNFAIP3-206ENST00000612899 CFTRP13569 1480 aa15.58■□□□□ 0.08
TNFAIP3-206ENST00000612899 DRC7Q8IY82 874 aa15.58■□□□□ 0.08
TNFAIP3-206ENST00000612899 FAM161AQ3B820 660 aa15.57■□□□□ 0.08
TNFAIP3-206ENST00000612899 FAM69CQ0P6D2 419 aa15.57■□□□□ 0.08
TNFAIP3-206ENST00000612899 GPATCH3Q96I76 525 aa15.57■□□□□ 0.08
TNFAIP3-206ENST00000612899 RIPK4P57078 832 aa15.57■□□□□ 0.08
TNFAIP3-206ENST00000612899 FYCO1Q9BQS8 1478 aa15.56■□□□□ 0.08
TNFAIP3-206ENST00000612899 NESP48681 1621 aa15.56■□□□□ 0.08
TNFAIP3-206ENST00000612899 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
TNFAIP3-206ENST00000612899 CFAP70Q5T0N1 1121 aa15.55■□□□□ 0.08
TNFAIP3-206ENST00000612899 TEFQ10587 303 aa15.55■□□□□ 0.08
TNFAIP3-206ENST00000612899 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
TNFAIP3-206ENST00000612899 GRIN2BQ13224 1484 aa15.54■□□□□ 0.08
TNFAIP3-206ENST00000612899 CNTLNQ9NXG0 1405 aa15.54■□□□□ 0.08
TNFAIP3-206ENST00000612899 RRBP1Q9P2E9 1410 aaKnown RBP15.54■□□□□ 0.08
TNFAIP3-206ENST00000612899 STAC3Q96MF2 364 aa15.53■□□□□ 0.08
TNFAIP3-206ENST00000612899 NBPF1Q3BBV0 1214 aa15.53■□□□□ 0.08
TNFAIP3-206ENST00000612899 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
TNFAIP3-206ENST00000612899 RILPL2Q969X0 211 aa15.52■□□□□ 0.08
TNFAIP3-206ENST00000612899 PRXQ9BXM0 1461 aa15.52■□□□□ 0.08
TNFAIP3-206ENST00000612899 CABP2Q9NPB3 220 aa15.52■□□□□ 0.08
TNFAIP3-206ENST00000612899 EIF2S2P20042 333 aaKnown RBP15.52■□□□□ 0.07
TNFAIP3-206ENST00000612899 NECTIN2Q92692 538 aa15.52■□□□□ 0.07
TNFAIP3-206ENST00000612899 RUNDC1Q96C34 613 aa15.52■□□□□ 0.07
TNFAIP3-206ENST00000612899 ADAMTS8Q9UP79 889 aa15.52■□□□□ 0.07
TNFAIP3-206ENST00000612899 CHAF1AQ13111 956 aaPredicted RBP15.52■□□□□ 0.07
TNFAIP3-206ENST00000612899 FOXD4L5Q5VV16 416 aaPredicted RBP15.51■□□□□ 0.07
TNFAIP3-206ENST00000612899 DZIP1LQ8IYY4 767 aaKnown RBP15.51■□□□□ 0.07
TNFAIP3-206ENST00000612899 NGEFQ8N5V2 710 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms