RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 ABCC5O15440 1437 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 KIAA1107Q9UPP5 1409 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 KIF3BO15066 747 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 BECN1Q14457 450 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 FTSJ3Q8IY81 847 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 ADAMTS12P58397 1594 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 APAF1O14727 1248 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 CLUAP1Q96AJ1 413 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 CFAP53Q96M91 514 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 ADAMTS8Q9UP79 889 aa8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 RRP7AQ9Y3A4 280 aaKnown RBP8.88□□□□□ -0.99
SYNPO2-206ENST00000610556 GRIN2BQ13224 1484 aa8.87□□□□□ -0.99
SYNPO2-206ENST00000610556 GGT6Q6P531 493 aa8.87□□□□□ -0.99
SYNPO2-206ENST00000610556 SLKQ9H2G2 1235 aaPredicted RBP8.87□□□□□ -0.99
SYNPO2-206ENST00000610556 PTPRGP23470 1445 aa8.87□□□□□ -0.99
SYNPO2-206ENST00000610556 RSPH4AQ5TD94 716 aa8.86□□□□□ -0.99
SYNPO2-206ENST00000610556 ARID4BQ4LE39 1312 aaPredicted RBP8.86□□□□□ -0.99
SYNPO2-206ENST00000610556 SMG6Q86US8 1419 aaKnown RBP8.86□□□□□ -0.99
SYNPO2-206ENST00000610556 NUTM2DQ5VT03 806 aaPredicted RBP8.86□□□□□ -0.99
SYNPO2-206ENST00000610556 BCL2L13Q9BXK5 485 aa8.86□□□□□ -0.99
SYNPO2-206ENST00000610556 BRD4O60885 1362 aaPredicted RBP8.86□□□□□ -0.99
SYNPO2-206ENST00000610556 TROQ12816 1431 aaPredicted RBP8.85□□□□□ -0.99
SYNPO2-206ENST00000610556 SPAG9O60271 1321 aaKnown RBP8.85□□□□□ -0.99
SYNPO2-206ENST00000610556 ZNF608Q9ULD9 1512 aaPredicted RBP8.84□□□□□ -0.99
SYNPO2-206ENST00000610556 RPRD2Q5VT52 1461 aaKnown RBP8.84□□□□□ -0.99
SYNPO2-206ENST00000610556 STK26Q9P289 416 aa8.84□□□□□ -0.99
SYNPO2-206ENST00000610556 TRAK1Q9UPV9 953 aa8.84□□□□□ -0.99
SYNPO2-206ENST00000610556 U2AF1L5P0DN76 240 aaPredicted RBP8.84□□□□□ -0.99
SYNPO2-206ENST00000610556 U2AF1Q01081 240 aaKnown RBP eCLIP8.84□□□□□ -0.99
SYNPO2-206ENST00000610556 ROCK1Q13464 1354 aa8.84□□□□□ -0.99
SYNPO2-206ENST00000610556 SNAPC4Q5SXM2 1469 aa8.84□□□□□ -0.99
SYNPO2-206ENST00000610556 PLPPR3Q6T4P5 718 aa8.83□□□□□ -1
SYNPO2-206ENST00000610556 COG6Q9Y2V7 657 aa8.83□□□□□ -1
SYNPO2-206ENST00000610556 HECW1Q76N89 1606 aa8.83□□□□□ -1
SYNPO2-206ENST00000610556 C9orf84Q5VXU9 1444 aa8.83□□□□□ -1
SYNPO2-206ENST00000610556 CENPQQ7L2Z9 268 aaPredicted RBP8.82□□□□□ -1
SYNPO2-206ENST00000610556 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.82□□□□□ -1
SYNPO2-206ENST00000610556 PLB1Q6P1J6 1458 aa8.82□□□□□ -1
SYNPO2-206ENST00000610556 KANK1Q14678 1352 aa8.82□□□□□ -1
SYNPO2-206ENST00000610556 MS4A1P11836 297 aa8.82□□□□□ -1
SYNPO2-206ENST00000610556 MAPK8IP3Q9UPT6 1336 aa8.82□□□□□ -1
SYNPO2-206ENST00000610556 SAMD9Q5K651 1589 aa8.81□□□□□ -1
SYNPO2-206ENST00000610556 CHD1O14646 1710 aa8.81□□□□□ -1
SYNPO2-206ENST00000610556 SRPK2P78362 688 aaKnown RBP8.81□□□□□ -1
SYNPO2-206ENST00000610556 FAM161AQ3B820 660 aa8.81□□□□□ -1
SYNPO2-206ENST00000610556 CENPJQ9HC77 1338 aaPredicted RBP8.81□□□□□ -1
SYNPO2-206ENST00000610556 IQGAP2Q13576 1575 aa8.81□□□□□ -1
SYNPO2-206ENST00000610556 SHROOM2Q13796 1616 aa8.81□□□□□ -1
SYNPO2-206ENST00000610556 C20orf194Q5TEA3 1177 aa8.81□□□□□ -1
SYNPO2-206ENST00000610556 AFAP1Q8N556 730 aa8.81□□□□□ -1
SYNPO2-206ENST00000610556 POGKQ9P215 609 aa8.81□□□□□ -1
SYNPO2-206ENST00000610556 IFT140Q96RY7 1462 aa8.81□□□□□ -1
SYNPO2-206ENST00000610556 BACH2Q9BYV9 841 aa8.8□□□□□ -1
SYNPO2-206ENST00000610556 UGGT2Q9NYU1 1516 aa8.8□□□□□ -1
SYNPO2-206ENST00000610556 PPP2R1AP30153 589 aa8.8□□□□□ -1
SYNPO2-206ENST00000610556 PRKCSHP14314 528 aaPredicted RBP8.79□□□□□ -1
SYNPO2-206ENST00000610556 GZF1Q9H116 711 aaPredicted RBP8.79□□□□□ -1
SYNPO2-206ENST00000610556 CFAP43Q8NDM7 1665 aa8.79□□□□□ -1
SYNPO2-206ENST00000610556 KIAA0586Q9BVV6 1533 aa8.79□□□□□ -1
SYNPO2-206ENST00000610556 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
SYNPO2-206ENST00000610556 PANK1Q8TE04 598 aa8.78□□□□□ -1
SYNPO2-206ENST00000610556 CAMSAP2Q08AD1 1489 aa8.78□□□□□ -1
SYNPO2-206ENST00000610556 CEP170Q5SW79 1584 aa8.78□□□□□ -1
SYNPO2-206ENST00000610556 BCAR3O75815 825 aa8.78□□□□□ -1
SYNPO2-206ENST00000610556 E9PSI1 815 aa8.77□□□□□ -1
SYNPO2-206ENST00000610556 ITPRIPQ8IWB1 547 aa8.77□□□□□ -1
SYNPO2-206ENST00000610556 IL27Q8NEV9 243 aa8.77□□□□□ -1
SYNPO2-206ENST00000610556 USP35Q9P2H5 1018 aa8.77□□□□□ -1.01
SYNPO2-206ENST00000610556 ARHGEF11O15085 1522 aa8.77□□□□□ -1.01
SYNPO2-206ENST00000610556 MFAP1P55081 439 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-206ENST00000610556 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-206ENST00000610556 GSE1Q14687 1217 aa8.76□□□□□ -1.01
SYNPO2-206ENST00000610556 NFKBIBQ15653 356 aa8.76□□□□□ -1.01
SYNPO2-206ENST00000610556 MYH16Q9H6N6 1097 aa8.76□□□□□ -1.01
SYNPO2-206ENST00000610556 EIF3AQ14152 1382 aaKnown RBP8.76□□□□□ -1.01
SYNPO2-206ENST00000610556 SMC4Q9NTJ3 1288 aa8.76□□□□□ -1.01
SYNPO2-206ENST00000610556 RWDD1Q9H446 243 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-206ENST00000610556 TMEM132EQ6IEE7 984 aa8.75□□□□□ -1.01
SYNPO2-206ENST00000610556 ANP32BQ92688 251 aaKnown RBP8.75□□□□□ -1.01
SYNPO2-206ENST00000610556 DHX29Q7Z478 1369 aaKnown RBP8.75□□□□□ -1.01
SYNPO2-206ENST00000610556 PLEKHG5O94827 1062 aa8.74□□□□□ -1.01
SYNPO2-206ENST00000610556 PMFBP1Q8TBY8 1022 aa8.74□□□□□ -1.01
SYNPO2-206ENST00000610556 MAGI3Q5TCQ9 1506 aa8.74□□□□□ -1.01
SYNPO2-206ENST00000610556 GPATCH8Q9UKJ3 1502 aaKnown RBP8.74□□□□□ -1.01
SYNPO2-206ENST00000610556 SOX12O15370 315 aa8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 NCLP19338 710 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 CLASP1Q7Z460 1538 aa8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 ERBINQ96RT1 1412 aa8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 CGNL1Q0VF96 1302 aa8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 WASHC2CQ9Y4E1 1318 aa8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 NUP153P49790 1475 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 TCOF1Q13428 1488 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 HSP90AB1P08238 724 aaKnown RBP8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 APBB1O00213 710 aa8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 ELL2O00472 640 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 FRAT2O75474 233 aaPredicted RBP8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 BRPF3Q9ULD4 1205 aa8.73□□□□□ -1.01
SYNPO2-206ENST00000610556 HSCBQ8IWL3 235 aa8.72□□□□□ -1.01
SYNPO2-206ENST00000610556 SLC12A5Q9H2X9 1139 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms