RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 RNF17Q9BXT8 1623 aaKnown RBP22.41■■□□□ 1.18
HDDC2-204ENST00000608295 EIF2AK4Q9P2K8 1649 aaKnown RBP22.41■■□□□ 1.18
HDDC2-204ENST00000608295 CEP152O94986 1710 aa22.4■■□□□ 1.18
HDDC2-204ENST00000608295 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
HDDC2-204ENST00000608295 MYO3AQ8NEV4 1616 aa22.39■■□□□ 1.18
HDDC2-204ENST00000608295 DUOX2Q9NRD8 1548 aa22.39■■□□□ 1.17
HDDC2-204ENST00000608295 SETD1BQ9UPS6 1966 aaKnown RBP22.38■■□□□ 1.17
HDDC2-204ENST00000608295 MROH1Q8NDA8 1641 aa22.37■■□□□ 1.17
HDDC2-204ENST00000608295 PTPRKQ15262 1439 aa22.34■■□□□ 1.17
HDDC2-204ENST00000608295 WASHC2CQ9Y4E1 1318 aa22.33■■□□□ 1.17
HDDC2-204ENST00000608295 ZC3H13Q5T200 1668 aaKnown RBP22.33■■□□□ 1.16
HDDC2-204ENST00000608295 ABCC3O15438 1527 aa22.32■■□□□ 1.16
HDDC2-204ENST00000608295 NPATQ14207 1427 aa22.31■■□□□ 1.16
HDDC2-204ENST00000608295 ANKRD30AQ9BXX3 1397 aa22.31■■□□□ 1.16
HDDC2-204ENST00000608295 ITGAEP38570 1179 aa22.31■■□□□ 1.16
HDDC2-204ENST00000608295 CAMSAP1Q5T5Y3 1602 aa22.3■■□□□ 1.16
HDDC2-204ENST00000608295 ERBINQ96RT1 1412 aa22.3■■□□□ 1.16
HDDC2-204ENST00000608295 STRCQ7RTU9 1775 aa22.3■■□□□ 1.16
HDDC2-204ENST00000608295 ZNF142P52746 1687 aaPredicted RBP22.3■■□□□ 1.16
HDDC2-204ENST00000608295 CFAP65Q6ZU64 1925 aaKnown RBP22.29■■□□□ 1.16
HDDC2-204ENST00000608295 FBXO31Q5XUX0 539 aaPredicted RBP22.29■■□□□ 1.16
HDDC2-204ENST00000608295 FAM135AQ9P2D6 1515 aa22.29■■□□□ 1.16
HDDC2-204ENST00000608295 CEP170BQ9Y4F5 1589 aaPredicted RBP22.29■■□□□ 1.16
HDDC2-204ENST00000608295 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.28■■□□□ 1.162e-7■■■■□ 19.8
HDDC2-204ENST00000608295 PZPP20742 1482 aa22.28■■□□□ 1.16
HDDC2-204ENST00000608295 PRDM15P57071 1507 aaPredicted RBP22.27■■□□□ 1.16
HDDC2-204ENST00000608295 PPP6R1Q9UPN7 881 aa22.27■■□□□ 1.16
HDDC2-204ENST00000608295 ADGRL2O95490 1459 aa22.27■■□□□ 1.16
HDDC2-204ENST00000608295 NCOA1Q15788 1441 aa22.26■■□□□ 1.15
HDDC2-204ENST00000608295 DEPDC5O75140 1603 aa22.26■■□□□ 1.15
HDDC2-204ENST00000608295 TNRQ92752 1358 aa22.24■■□□□ 1.15
HDDC2-204ENST00000608295 ERVK-7P63135 1459 aa22.18■■□□□ 1.14
HDDC2-204ENST00000608295 ANKRD50Q9ULJ7 1429 aa22.18■■□□□ 1.14
HDDC2-204ENST00000608295 A2ML1A8K2U0 1454 aa22.17■■□□□ 1.14
HDDC2-204ENST00000608295 KANK1Q14678 1352 aa22.16■■□□□ 1.14
HDDC2-204ENST00000608295 SPATA31D1Q6ZQQ2 1576 aa22.16■■□□□ 1.14
HDDC2-204ENST00000608295 NCKAP5LQ9HCH0 1330 aa22.14■■□□□ 1.14
HDDC2-204ENST00000608295 RRBP1Q9P2E9 1410 aaKnown RBP22.13■■□□□ 1.13
HDDC2-204ENST00000608295 POLR1AO95602 1720 aaPredicted RBP22.12■■□□□ 1.13
HDDC2-204ENST00000608295 VWDEQ8N2E2 1590 aa22.12■■□□□ 1.13
HDDC2-204ENST00000608295 UNC13BO14795 1591 aa22.11■■□□□ 1.13
HDDC2-204ENST00000608295 UGGT1Q9NYU2 1555 aa22.11■■□□□ 1.13
HDDC2-204ENST00000608295 EFCAB6Q5THR3 1501 aa22.1■■□□□ 1.13
HDDC2-204ENST00000608295 NLRP1Q9C000 1473 aa22.09■■□□□ 1.13
HDDC2-204ENST00000608295 PLA2R1Q13018 1463 aa22.09■■□□□ 1.13
HDDC2-204ENST00000608295 ROCK1Q13464 1354 aa22.08■■□□□ 1.12
HDDC2-204ENST00000608295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.122e-9■□□□□ 11.3
HDDC2-204ENST00000608295 LMTK2Q8IWU2 1503 aa22.06■■□□□ 1.12
HDDC2-204ENST00000608295 ILDR1Q86SU0 546 aaPredicted RBP22.06■■□□□ 1.12
HDDC2-204ENST00000608295 UBR1Q8IWV7 1749 aa22.06■■□□□ 1.12
HDDC2-204ENST00000608295 TET3O43151 1660 aa22.05■■□□□ 1.12
HDDC2-204ENST00000608295 PIK3C2BO00750 1634 aa22.05■■□□□ 1.12
HDDC2-204ENST00000608295 ARHGAP31Q2M1Z3 1444 aa22.05■■□□□ 1.12
HDDC2-204ENST00000608295 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
HDDC2-204ENST00000608295 SYNMO15061 1565 aa22.04■■□□□ 1.12
HDDC2-204ENST00000608295 NEURL4Q96JN8 1562 aa22.04■■□□□ 1.12
HDDC2-204ENST00000608295 DMRT2Q9Y5R5 561 aa22.04■■□□□ 1.12
HDDC2-204ENST00000608295 PTPRTO14522 1441 aa22.04■■□□□ 1.12
HDDC2-204ENST00000608295 IQGAP3Q86VI3 1631 aa22.01■■□□□ 1.11
HDDC2-204ENST00000608295 E9PCH4 1651 aa22■■□□□ 1.11
HDDC2-204ENST00000608295 PKD2Q13563 968 aa21.97■■□□□ 1.11
HDDC2-204ENST00000608295 THEMISQ8N1K5 641 aaPredicted RBP21.96■■□□□ 1.11
HDDC2-204ENST00000608295 ZNF335Q9H4Z2 1342 aaPredicted RBP21.96■■□□□ 1.11
HDDC2-204ENST00000608295 NUP155O75694 1391 aa21.96■■□□□ 1.11
HDDC2-204ENST00000608295 MYO5BQ9ULV0 1848 aa21.95■■□□□ 1.1
HDDC2-204ENST00000608295 CERKQ8TCT0 537 aa21.95■■□□□ 1.1
HDDC2-204ENST00000608295 IQGAP1P46940 1657 aa21.95■■□□□ 1.1
HDDC2-204ENST00000608295 STAG3Q9UJ98 1225 aa21.94■■□□□ 1.1
HDDC2-204ENST00000608295 NAIPQ13075 1403 aa21.94■■□□□ 1.1
HDDC2-204ENST00000608295 LTBP4Q8N2S1 1624 aa21.94■■□□□ 1.1
HDDC2-204ENST00000608295 NOS1P29475 1434 aa21.93■■□□□ 1.1
HDDC2-204ENST00000608295 ANKLE2Q86XL3 938 aa21.92■■□□□ 1.1
HDDC2-204ENST00000608295 ADGRB3O60242 1522 aa21.91■■□□□ 1.1
HDDC2-204ENST00000608295 RPRD2Q5VT52 1461 aaKnown RBP21.91■■□□□ 1.1
HDDC2-204ENST00000608295 NPHP4O75161 1426 aaPredicted RBP21.91■■□□□ 1.1
HDDC2-204ENST00000608295 IDI1Q13907 227 aa21.89■■□□□ 1.09
HDDC2-204ENST00000608295 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
HDDC2-204ENST00000608295 FBXO41Q8TF61 875 aa21.88■■□□□ 1.09
HDDC2-204ENST00000608295 SCAF11Q99590 1463 aaKnown RBP21.88■■□□□ 1.09
HDDC2-204ENST00000608295 HFM1A2PYH4 1435 aa21.88■■□□□ 1.09
HDDC2-204ENST00000608295 SPHKAPQ2M3C7 1700 aa21.86■■□□□ 1.09
HDDC2-204ENST00000608295 SLIT1O75093 1534 aa21.86■■□□□ 1.09
HDDC2-204ENST00000608295 KDM5AP29375 1690 aaKnown RBP21.85■■□□□ 1.09
HDDC2-204ENST00000608295 ARHGAP23Q9P227 1491 aa21.85■■□□□ 1.09
HDDC2-204ENST00000608295 CHGAP10645 457 aaKnown RBP21.85■■□□□ 1.09
HDDC2-204ENST00000608295 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
HDDC2-204ENST00000608295 MED14O60244 1454 aa21.83■■□□□ 1.09
HDDC2-204ENST00000608295 LTKP29376 864 aa21.83■■□□□ 1.09
HDDC2-204ENST00000608295 TXNDC2Q86VQ3 553 aa21.82■■□□□ 1.08
HDDC2-204ENST00000608295 TMEM2Q9UHN6 1383 aa21.82■■□□□ 1.08
HDDC2-204ENST00000608295 STRCP1A6NGW2 1772 aa21.82■■□□□ 1.08
HDDC2-204ENST00000608295 TMEM131LA2VDJ0 1609 aa21.81■■□□□ 1.08
HDDC2-204ENST00000608295 EID1Q9Y6B2 187 aa21.79■■□□□ 1.08
HDDC2-204ENST00000608295 SLC52A1Q9NWF4 448 aa21.78■■□□□ 1.08
HDDC2-204ENST00000608295 CLTCL1P53675 1640 aa21.77■■□□□ 1.07
HDDC2-204ENST00000608295 NUTM2DQ5VT03 806 aaPredicted RBP21.75■■□□□ 1.07
HDDC2-204ENST00000608295 BCANQ96GW7 911 aa21.74■■□□□ 1.07
HDDC2-204ENST00000608295 CPS1P31327 1500 aa21.74■■□□□ 1.07
HDDC2-204ENST00000608295 RIMS2Q9UQ26 1411 aa21.73■■□□□ 1.07
HDDC2-204ENST00000608295 PPP1R15AO75807 674 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms