RNA–Protein interactions for RNA: ENST00000605881.5

TRIM49D1-203, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM49D1, Length 1,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-203ENST00000605881 CDC42BPBQ9Y5S2 1711 aa10.9□□□□□ -0.66
TRIM49D1-203ENST00000605881 TCOF1Q13428 1488 aaKnown RBP10.9□□□□□ -0.66
TRIM49D1-203ENST00000605881 PTPRKQ15262 1439 aa10.9□□□□□ -0.67
TRIM49D1-203ENST00000605881 PREX2Q70Z35 1606 aa10.9□□□□□ -0.67
TRIM49D1-203ENST00000605881 A2MP01023 1474 aa10.89□□□□□ -0.67
TRIM49D1-203ENST00000605881 PLEKHH2Q8IVE3 1493 aa10.89□□□□□ -0.67
TRIM49D1-203ENST00000605881 ANKLE2Q86XL3 938 aa10.89□□□□□ -0.67
TRIM49D1-203ENST00000605881 CASKIN1Q8WXD9 1431 aa10.89□□□□□ -0.67
TRIM49D1-203ENST00000605881 KIDINS220Q9ULH0 1771 aa10.89□□□□□ -0.67
TRIM49D1-203ENST00000605881 SAMD9LQ8IVG5 1584 aa10.89□□□□□ -0.67
TRIM49D1-203ENST00000605881 ITSN2Q9NZM3 1697 aa10.88□□□□□ -0.67
TRIM49D1-203ENST00000605881 CEP170BQ9Y4F5 1589 aaPredicted RBP10.87□□□□□ -0.67
TRIM49D1-203ENST00000605881 KIAA1107Q9UPP5 1409 aa10.87□□□□□ -0.67
TRIM49D1-203ENST00000605881 THEMISQ8N1K5 641 aaPredicted RBP10.87□□□□□ -0.67
TRIM49D1-203ENST00000605881 CPS1P31327 1500 aa10.87□□□□□ -0.67
TRIM49D1-203ENST00000605881 CCNB3Q8WWL7 1395 aa10.86□□□□□ -0.67
TRIM49D1-203ENST00000605881 A2ML1A8K2U0 1454 aa10.86□□□□□ -0.67
TRIM49D1-203ENST00000605881 ATP7AQ04656 1500 aa10.85□□□□□ -0.67
TRIM49D1-203ENST00000605881 MED1Q15648 1581 aaPredicted RBP10.85□□□□□ -0.67
TRIM49D1-203ENST00000605881 SYCP2Q9BX26 1530 aa10.85□□□□□ -0.67
TRIM49D1-203ENST00000605881 GPATCH8Q9UKJ3 1502 aaKnown RBP10.85□□□□□ -0.67
TRIM49D1-203ENST00000605881 MYO3AQ8NEV4 1616 aa10.85□□□□□ -0.67
TRIM49D1-203ENST00000605881 SUPT6HQ7KZ85 1726 aaKnown RBP10.85□□□□□ -0.67
TRIM49D1-203ENST00000605881 SHANK2Q9UPX8 1470 aa10.84□□□□□ -0.67
TRIM49D1-203ENST00000605881 CLTCQ00610 1675 aaKnown RBP10.84□□□□□ -0.67
TRIM49D1-203ENST00000605881 ZNF142P52746 1687 aaPredicted RBP10.84□□□□□ -0.67
TRIM49D1-203ENST00000605881 TNRQ92752 1358 aa10.84□□□□□ -0.67
TRIM49D1-203ENST00000605881 POLA2Q14181 598 aa10.84□□□□□ -0.67
TRIM49D1-203ENST00000605881 WASHC2CQ9Y4E1 1318 aa10.83□□□□□ -0.68
TRIM49D1-203ENST00000605881 KIF3BO15066 747 aa10.83□□□□□ -0.68
TRIM49D1-203ENST00000605881 FBXO31Q5XUX0 539 aaPredicted RBP10.82□□□□□ -0.68
TRIM49D1-203ENST00000605881 MTUS2Q5JR59 1369 aa10.81□□□□□ -0.68
TRIM49D1-203ENST00000605881 DHX29Q7Z478 1369 aaKnown RBP10.81□□□□□ -0.68
TRIM49D1-203ENST00000605881 CDC42BPAQ5VT25 1732 aa10.81□□□□□ -0.68
TRIM49D1-203ENST00000605881 FYCO1Q9BQS8 1478 aa10.8□□□□□ -0.68
TRIM49D1-203ENST00000605881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRIM49D1-203ENST00000605881 PLXNC1O60486 1568 aa10.8□□□□□ -0.68
TRIM49D1-203ENST00000605881 RSPH4AQ5TD94 716 aa10.8□□□□□ -0.68
TRIM49D1-203ENST00000605881 DNMT1P26358 1616 aaKnown RBP10.8□□□□□ -0.68
TRIM49D1-203ENST00000605881 RTEL1-TNFRSF6BF6WH68 1400 aa10.79□□□□□ -0.68
TRIM49D1-203ENST00000605881 FAM135AQ9P2D6 1515 aa10.79□□□□□ -0.68
TRIM49D1-203ENST00000605881 NPHP4O75161 1426 aaPredicted RBP10.78□□□□□ -0.68
TRIM49D1-203ENST00000605881 LRRIQ1Q96JM4 1722 aa10.78□□□□□ -0.68
TRIM49D1-203ENST00000605881 INO80Q9ULG1 1556 aaPredicted RBP10.78□□□□□ -0.68
TRIM49D1-203ENST00000605881 MIA2Q96PC5 1412 aa10.78□□□□□ -0.68
TRIM49D1-203ENST00000605881 PZPP20742 1482 aa10.77□□□□□ -0.69
TRIM49D1-203ENST00000605881 NLRP1Q9C000 1473 aa10.77□□□□□ -0.69
TRIM49D1-203ENST00000605881 TSPY4P0CV99 314 aa10.76□□□□□ -0.69
TRIM49D1-203ENST00000605881 TSPY10P0CW01 314 aa10.76□□□□□ -0.69
TRIM49D1-203ENST00000605881 ZNF644Q9H582 1327 aaPredicted RBP10.76□□□□□ -0.69
TRIM49D1-203ENST00000605881 AKT1S1Q96B36 256 aa10.75□□□□□ -0.69
TRIM49D1-203ENST00000605881 ADGBQ8N7X0 1667 aa10.75□□□□□ -0.69
TRIM49D1-203ENST00000605881 UGGT1Q9NYU2 1555 aa10.75□□□□□ -0.69
TRIM49D1-203ENST00000605881 MED14O60244 1454 aa10.74□□□□□ -0.69
TRIM49D1-203ENST00000605881 KDM5DQ9BY66 1539 aa10.74□□□□□ -0.69
TRIM49D1-203ENST00000605881 NEURL4Q96JN8 1562 aa10.73□□□□□ -0.69
TRIM49D1-203ENST00000605881 POLR1AO95602 1720 aaPredicted RBP10.73□□□□□ -0.69
TRIM49D1-203ENST00000605881 VWDEQ8N2E2 1590 aa10.72□□□□□ -0.69
TRIM49D1-203ENST00000605881 MBD5Q9P267 1494 aa10.72□□□□□ -0.69
TRIM49D1-203ENST00000605881 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
TRIM49D1-203ENST00000605881 EID1Q9Y6B2 187 aa10.71□□□□□ -0.69
TRIM49D1-203ENST00000605881 DEPDC5O75140 1603 aa10.71□□□□□ -0.7
TRIM49D1-203ENST00000605881 LRRC7Q96NW7 1537 aa10.7□□□□□ -0.7
TRIM49D1-203ENST00000605881 CCDC141Q6ZP82 1450 aa10.7□□□□□ -0.7
TRIM49D1-203ENST00000605881 TXNDC2Q86VQ3 553 aa10.69□□□□□ -0.7
TRIM49D1-203ENST00000605881 RGS17Q9UGC6 210 aaPredicted RBP10.69□□□□□ -0.7
TRIM49D1-203ENST00000605881 HAX1O00165 279 aa10.68□□□□□ -0.7
TRIM49D1-203ENST00000605881 CEP162Q5TB80 1403 aa10.68□□□□□ -0.7
TRIM49D1-203ENST00000605881 STAG3Q9UJ98 1225 aa10.67□□□□□ -0.7
TRIM49D1-203ENST00000605881 IQGAP1P46940 1657 aa10.67□□□□□ -0.7
TRIM49D1-203ENST00000605881 RNF17Q9BXT8 1623 aaKnown RBP10.67□□□□□ -0.7
TRIM49D1-203ENST00000605881 EHBP1L1Q8N3D4 1523 aa10.67□□□□□ -0.7
TRIM49D1-203ENST00000605881 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
TRIM49D1-203ENST00000605881 SLC4A1APQ9BWU0 796 aaKnown RBP10.67□□□□□ -0.7
TRIM49D1-203ENST00000605881 SYNMO15061 1565 aa10.66□□□□□ -0.7
TRIM49D1-203ENST00000605881 TIAM1Q13009 1591 aa10.66□□□□□ -0.7
TRIM49D1-203ENST00000605881 ALKQ9UM73 1620 aa10.66□□□□□ -0.7
TRIM49D1-203ENST00000605881 POTEAQ6S8J7 498 aa10.66□□□□□ -0.7
TRIM49D1-203ENST00000605881 FAM135BQ49AJ0 1406 aa10.66□□□□□ -0.7
TRIM49D1-203ENST00000605881 SCAF11Q99590 1463 aaKnown RBP10.65□□□□□ -0.7
TRIM49D1-203ENST00000605881 REM2Q8IYK8 340 aaPredicted RBP10.65□□□□□ -0.7
TRIM49D1-203ENST00000605881 CAMSAP2Q08AD1 1489 aa10.64□□□□□ -0.71
TRIM49D1-203ENST00000605881 LTKP29376 864 aa10.63□□□□□ -0.71
TRIM49D1-203ENST00000605881 PROSER2Q86WR7 435 aaPredicted RBP10.63□□□□□ -0.71
TRIM49D1-203ENST00000605881 ERVK-7P63135 1459 aa10.63□□□□□ -0.71
TRIM49D1-203ENST00000605881 KCNA6P17658 529 aa10.62□□□□□ -0.71
TRIM49D1-203ENST00000605881 BCANQ96GW7 911 aa10.61□□□□□ -0.71
TRIM49D1-203ENST00000605881 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
TRIM49D1-203ENST00000605881 ABCC3O15438 1527 aa10.61□□□□□ -0.71
TRIM49D1-203ENST00000605881 TMEM94Q12767 1356 aa10.6□□□□□ -0.71
TRIM49D1-203ENST00000605881 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
TRIM49D1-203ENST00000605881 ARHGEF5Q12774 1597 aa10.59□□□□□ -0.71
TRIM49D1-203ENST00000605881 MEX3CQ5U5Q3 659 aaKnown RBP10.58□□□□□ -0.72
TRIM49D1-203ENST00000605881 ZC3H13Q5T200 1668 aaKnown RBP10.58□□□□□ -0.72
TRIM49D1-203ENST00000605881 STRCP1A6NGW2 1772 aa10.58□□□□□ -0.72
TRIM49D1-203ENST00000605881 MSH6P52701 1360 aa10.58□□□□□ -0.72
TRIM49D1-203ENST00000605881 KANK1Q14678 1352 aa10.58□□□□□ -0.72
TRIM49D1-203ENST00000605881 TMEM2Q9UHN6 1383 aa10.58□□□□□ -0.72
TRIM49D1-203ENST00000605881 SLIT1O75093 1534 aa10.58□□□□□ -0.72
TRIM49D1-203ENST00000605881 LOC105371045A0A1W2PR82 267 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms