RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
CEACAM1-213ENST00000599389 IQGAP1P46940 1657 aa11.98□□□□□ -0.49
CEACAM1-213ENST00000599389 SETD1AO15047 1707 aaKnown RBP11.98□□□□□ -0.49
CEACAM1-213ENST00000599389 FAM135AQ9P2D6 1515 aa11.97□□□□□ -0.49
CEACAM1-213ENST00000599389 ZC3H13Q5T200 1668 aaKnown RBP11.95□□□□□ -0.5
CEACAM1-213ENST00000599389 XIRP1Q702N8 1843 aaKnown RBP11.95□□□□□ -0.5
CEACAM1-213ENST00000599389 PZPP20742 1482 aa11.95□□□□□ -0.5
CEACAM1-213ENST00000599389 SPAG9O60271 1321 aaKnown RBP11.94□□□□□ -0.5
CEACAM1-213ENST00000599389 CCDC18Q5T9S5 1454 aa11.94□□□□□ -0.5
CEACAM1-213ENST00000599389 NPHP4O75161 1426 aaPredicted RBP11.94□□□□□ -0.5
CEACAM1-213ENST00000599389 KIAA1107Q9UPP5 1409 aa11.94□□□□□ -0.5
CEACAM1-213ENST00000599389 TNRQ92752 1358 aa11.93□□□□□ -0.5
CEACAM1-213ENST00000599389 NLRP1Q9C000 1473 aa11.93□□□□□ -0.5
CEACAM1-213ENST00000599389 GPATCH8Q9UKJ3 1502 aaKnown RBP11.92□□□□□ -0.5
CEACAM1-213ENST00000599389 POTEAQ6S8J7 498 aa11.92□□□□□ -0.5
CEACAM1-213ENST00000599389 KDM5DQ9BY66 1539 aa11.91□□□□□ -0.5
CEACAM1-213ENST00000599389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.91□□□□□ -0.5
CEACAM1-213ENST00000599389 PLEKHH2Q8IVE3 1493 aa11.91□□□□□ -0.5
CEACAM1-213ENST00000599389 UGGT1Q9NYU2 1555 aa11.91□□□□□ -0.5
CEACAM1-213ENST00000599389 ATP1B4Q9UN42 357 aaPredicted RBP11.9□□□□□ -0.5
CEACAM1-213ENST00000599389 ADRA2BP18089 450 aa11.89□□□□□ -0.51
CEACAM1-213ENST00000599389 ANKLE2Q86XL3 938 aa11.89□□□□□ -0.51
CEACAM1-213ENST00000599389 CASKIN1Q8WXD9 1431 aa11.89□□□□□ -0.51
CEACAM1-213ENST00000599389 GGT6Q6P531 493 aa11.88□□□□□ -0.51
CEACAM1-213ENST00000599389 FBXO31Q5XUX0 539 aaPredicted RBP11.86□□□□□ -0.51
CEACAM1-213ENST00000599389 MIA2Q96PC5 1412 aa11.86□□□□□ -0.51
CEACAM1-213ENST00000599389 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
CEACAM1-213ENST00000599389 HNRNPMP52272 730 aaKnown RBP eCLIP11.86□□□□□ -0.51
CEACAM1-213ENST00000599389 THEMISQ8N1K5 641 aaPredicted RBP11.85□□□□□ -0.51
CEACAM1-213ENST00000599389 MBD5Q9P267 1494 aa11.84□□□□□ -0.51
CEACAM1-213ENST00000599389 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
CEACAM1-213ENST00000599389 ROBO1Q9Y6N7 1651 aa11.84□□□□□ -0.51
CEACAM1-213ENST00000599389 FYCO1Q9BQS8 1478 aa11.84□□□□□ -0.51
CEACAM1-213ENST00000599389 UBR1Q8IWV7 1749 aa11.84□□□□□ -0.51
CEACAM1-213ENST00000599389 DHX29Q7Z478 1369 aaKnown RBP11.83□□□□□ -0.52
CEACAM1-213ENST00000599389 ZNF777Q9ULD5 760 aaPredicted RBP11.82□□□□□ -0.52
CEACAM1-213ENST00000599389 SCAF11Q99590 1463 aaKnown RBP11.8□□□□□ -0.52
CEACAM1-213ENST00000599389 ARHGAP23Q9P227 1491 aa11.8□□□□□ -0.52
CEACAM1-213ENST00000599389 MAP3K1Q13233 1512 aa11.8□□□□□ -0.52
CEACAM1-213ENST00000599389 TIAM1Q13009 1591 aa11.8□□□□□ -0.52
CEACAM1-213ENST00000599389 SLIT1O75093 1534 aa11.79□□□□□ -0.52
CEACAM1-213ENST00000599389 NCOA2Q15596 1464 aa11.79□□□□□ -0.52
CEACAM1-213ENST00000599389 ABCC3O15438 1527 aa11.78□□□□□ -0.52
CEACAM1-213ENST00000599389 ERVK-7P63135 1459 aa11.78□□□□□ -0.52
CEACAM1-213ENST00000599389 UPF1Q92900 1129 aaKnown RBP eCLIP11.78□□□□□ -0.52
CEACAM1-213ENST00000599389 LRRC9Q6ZRR7 1453 aa11.77□□□□□ -0.53
CEACAM1-213ENST00000599389 CFDP1Q9UEE9 299 aaPredicted RBP11.77□□□□□ -0.53
CEACAM1-213ENST00000599389 CAMSAP2Q08AD1 1489 aa11.76□□□□□ -0.53
CEACAM1-213ENST00000599389 COL16A1Q07092 1604 aaPredicted RBP11.76□□□□□ -0.53
CEACAM1-213ENST00000599389 MROH1Q8NDA8 1641 aa11.76□□□□□ -0.53
CEACAM1-213ENST00000599389 CCNB3Q8WWL7 1395 aa11.75□□□□□ -0.53
CEACAM1-213ENST00000599389 PHLPP1O60346 1717 aa11.75□□□□□ -0.53
CEACAM1-213ENST00000599389 LRP6O75581 1613 aa11.75□□□□□ -0.53
CEACAM1-213ENST00000599389 EP400Q96L91 3159 aa11.75□□□□□ -0.53
CEACAM1-213ENST00000599389 CCDC141Q6ZP82 1450 aa11.74□□□□□ -0.53
CEACAM1-213ENST00000599389 WASHC2CQ9Y4E1 1318 aa11.74□□□□□ -0.53
CEACAM1-213ENST00000599389 KIF3BO15066 747 aa11.74□□□□□ -0.53
CEACAM1-213ENST00000599389 UBTFP17480 764 aaKnown RBP11.74□□□□□ -0.53
CEACAM1-213ENST00000599389 NWD1Q149M9 1564 aa11.74□□□□□ -0.53
CEACAM1-213ENST00000599389 ZNF644Q9H582 1327 aaPredicted RBP11.73□□□□□ -0.53
CEACAM1-213ENST00000599389 TMEM94Q12767 1356 aa11.72□□□□□ -0.53
CEACAM1-213ENST00000599389 CDK12Q9NYV4 1490 aaPredicted RBP11.72□□□□□ -0.53
CEACAM1-213ENST00000599389 EIF2AK4Q9P2K8 1649 aaKnown RBP11.72□□□□□ -0.53
CEACAM1-213ENST00000599389 JCADQ9P266 1359 aa11.72□□□□□ -0.53
CEACAM1-213ENST00000599389 CEP152O94986 1710 aa11.71□□□□□ -0.53
CEACAM1-213ENST00000599389 NKTRP30414 1462 aaKnown RBP11.71□□□□□ -0.53
CEACAM1-213ENST00000599389 LTKP29376 864 aa11.71□□□□□ -0.53
CEACAM1-213ENST00000599389 PRDM15P57071 1507 aaPredicted RBP11.71□□□□□ -0.54
CEACAM1-213ENST00000599389 KDM5AP29375 1690 aaKnown RBP11.7□□□□□ -0.54
CEACAM1-213ENST00000599389 SHPRHQ149N8 1683 aa11.7□□□□□ -0.54
CEACAM1-213ENST00000599389 ARHGEF5Q12774 1597 aa11.7□□□□□ -0.54
CEACAM1-213ENST00000599389 CFAP65Q6ZU64 1925 aaKnown RBP11.7□□□□□ -0.54
CEACAM1-213ENST00000599389 TET3O43151 1660 aa11.69□□□□□ -0.54
CEACAM1-213ENST00000599389 EHBP1L1Q8N3D4 1523 aa11.69□□□□□ -0.54
CEACAM1-213ENST00000599389 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
CEACAM1-213ENST00000599389 PIK3C2BO00750 1634 aa11.68□□□□□ -0.54
CEACAM1-213ENST00000599389 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
CEACAM1-213ENST00000599389 MAST1Q9Y2H9 1570 aa11.67□□□□□ -0.54
CEACAM1-213ENST00000599389 AHDC1Q5TGY3 1603 aaPredicted RBP11.66□□□□□ -0.54
CEACAM1-213ENST00000599389 ARHGAP31Q2M1Z3 1444 aa11.65□□□□□ -0.54
CEACAM1-213ENST00000599389 SPATA31A6Q5VVP1 1343 aa11.65□□□□□ -0.54
CEACAM1-213ENST00000599389 DIP2AQ14689 1571 aa11.65□□□□□ -0.55
CEACAM1-213ENST00000599389 MTUS2Q5JR59 1369 aa11.64□□□□□ -0.55
CEACAM1-213ENST00000599389 TMEM2Q9UHN6 1383 aa11.64□□□□□ -0.55
CEACAM1-213ENST00000599389 TXNDC2Q86VQ3 553 aa11.64□□□□□ -0.55
CEACAM1-213ENST00000599389 KCNA6P17658 529 aa11.63□□□□□ -0.55
CEACAM1-213ENST00000599389 ZNF772Q68DY9 489 aaPredicted RBP11.63□□□□□ -0.55
CEACAM1-213ENST00000599389 EHMT2Q96KQ7 1210 aa11.63□□□□□ -0.55
CEACAM1-213ENST00000599389 TRIM52Q96A61 297 aa11.62□□□□□ -0.55
CEACAM1-213ENST00000599389 EFCAB6Q5THR3 1501 aa11.62□□□□□ -0.55
CEACAM1-213ENST00000599389 CHD2O14647 1828 aaKnown RBP11.62□□□□□ -0.55
CEACAM1-213ENST00000599389 MSH6P52701 1360 aa11.61□□□□□ -0.55
CEACAM1-213ENST00000599389 RGS12O14924 1447 aa11.61□□□□□ -0.55
CEACAM1-213ENST00000599389 RSPH4AQ5TD94 716 aa11.6□□□□□ -0.55
CEACAM1-213ENST00000599389 SLAIN2Q9P270 581 aa11.6□□□□□ -0.55
CEACAM1-213ENST00000599389 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
CEACAM1-213ENST00000599389 ADGRB3O60242 1522 aa11.58□□□□□ -0.56
CEACAM1-213ENST00000599389 RXRBP28702 533 aa11.58□□□□□ -0.56
CEACAM1-213ENST00000599389 PROSER2Q86WR7 435 aaPredicted RBP11.58□□□□□ -0.56
CEACAM1-213ENST00000599389 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms