RNA–Protein interactions for RNA: ENST00000598706.1

RAB11B-203, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB11B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-203ENST00000598706 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
RAB11B-203ENST00000598706 DEPDC5O75140 1603 aa23.26■■□□□ 1.31
RAB11B-203ENST00000598706 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
RAB11B-203ENST00000598706 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
RAB11B-203ENST00000598706 MED14O60244 1454 aa23.24■■□□□ 1.31
RAB11B-203ENST00000598706 ANKLE2Q86XL3 938 aa23.24■■□□□ 1.31
RAB11B-203ENST00000598706 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
RAB11B-203ENST00000598706 NPHP4O75161 1426 aaPredicted RBP23.24■■□□□ 1.31
RAB11B-203ENST00000598706 IQGAP1P46940 1657 aa23.23■■□□□ 1.31
RAB11B-203ENST00000598706 PZPP20742 1482 aa23.23■■□□□ 1.31
RAB11B-203ENST00000598706 SYNMO15061 1565 aa23.23■■□□□ 1.31
RAB11B-203ENST00000598706 RGS17Q9UGC6 210 aaPredicted RBP23.22■■□□□ 1.31
RAB11B-203ENST00000598706 FBXO31Q5XUX0 539 aaPredicted RBP23.21■■□□□ 1.31
RAB11B-203ENST00000598706 LRRC7Q96NW7 1537 aa23.21■■□□□ 1.31
RAB11B-203ENST00000598706 FYCO1Q9BQS8 1478 aa23.2■■□□□ 1.3
RAB11B-203ENST00000598706 CFDP1Q9UEE9 299 aaPredicted RBP23.2■■□□□ 1.3
RAB11B-203ENST00000598706 UGGT1Q9NYU2 1555 aa23.19■■□□□ 1.3
RAB11B-203ENST00000598706 KDM5DQ9BY66 1539 aa23.19■■□□□ 1.3
RAB11B-203ENST00000598706 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
RAB11B-203ENST00000598706 THEMISQ8N1K5 641 aaPredicted RBP23.18■■□□□ 1.3
RAB11B-203ENST00000598706 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
RAB11B-203ENST00000598706 CCNB3Q8WWL7 1395 aa23.15■■□□□ 1.3
RAB11B-203ENST00000598706 DHX29Q7Z478 1369 aaKnown RBP23.14■■□□□ 1.29
RAB11B-203ENST00000598706 MIA2Q96PC5 1412 aa23.13■■□□□ 1.29
RAB11B-203ENST00000598706 RTEL1-TNFRSF6BF6WH68 1400 aa23.12■■□□□ 1.29
RAB11B-203ENST00000598706 MBD5Q9P267 1494 aa23.1■■□□□ 1.29
RAB11B-203ENST00000598706 KIF3BO15066 747 aa23.09■■□□□ 1.29
RAB11B-203ENST00000598706 ZC3H13Q5T200 1668 aaKnown RBP23.08■■□□□ 1.29
RAB11B-203ENST00000598706 WASHC2CQ9Y4E1 1318 aa23.07■■□□□ 1.28
RAB11B-203ENST00000598706 POTEAQ6S8J7 498 aa23.06■■□□□ 1.28
RAB11B-203ENST00000598706 ZNF644Q9H582 1327 aaPredicted RBP23.06■■□□□ 1.28
RAB11B-203ENST00000598706 TIAM1Q13009 1591 aa23.06■■□□□ 1.28
RAB11B-203ENST00000598706 XIRP1Q702N8 1843 aaKnown RBP23.05■■□□□ 1.28
RAB11B-203ENST00000598706 SETD1AO15047 1707 aaKnown RBP23.05■■□□□ 1.28
RAB11B-203ENST00000598706 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
RAB11B-203ENST00000598706 CCDC141Q6ZP82 1450 aa22.98■■□□□ 1.27
RAB11B-203ENST00000598706 FAM135BQ49AJ0 1406 aa22.97■■□□□ 1.27
RAB11B-203ENST00000598706 UBR1Q8IWV7 1749 aa22.96■■□□□ 1.27
RAB11B-203ENST00000598706 SCAF11Q99590 1463 aaKnown RBP22.96■■□□□ 1.27
RAB11B-203ENST00000598706 ERVK-7P63135 1459 aa22.93■■□□□ 1.26
RAB11B-203ENST00000598706 ABCC3O15438 1527 aa22.92■■□□□ 1.26
RAB11B-203ENST00000598706 EHBP1L1Q8N3D4 1523 aa22.92■■□□□ 1.26
RAB11B-203ENST00000598706 ROBO1Q9Y6N7 1651 aa22.92■■□□□ 1.26
RAB11B-203ENST00000598706 CAMSAP2Q08AD1 1489 aa22.89■■□□□ 1.25
RAB11B-203ENST00000598706 CFAP65Q6ZU64 1925 aaKnown RBP22.88■■□□□ 1.25
RAB11B-203ENST00000598706 SLIT1O75093 1534 aa22.87■■□□□ 1.25
RAB11B-203ENST00000598706 NCOA2Q15596 1464 aa22.87■■□□□ 1.25
RAB11B-203ENST00000598706 ARHGAP23Q9P227 1491 aa22.87■■□□□ 1.25
RAB11B-203ENST00000598706 CEP162Q5TB80 1403 aa22.87■■□□□ 1.25
RAB11B-203ENST00000598706 LTKP29376 864 aa22.85■■□□□ 1.25
RAB11B-203ENST00000598706 CEP152O94986 1710 aa22.85■■□□□ 1.25
RAB11B-203ENST00000598706 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
RAB11B-203ENST00000598706 RSPH4AQ5TD94 716 aa22.83■■□□□ 1.25
RAB11B-203ENST00000598706 TXNDC2Q86VQ3 553 aa22.83■■□□□ 1.25
RAB11B-203ENST00000598706 ARHGEF5Q12774 1597 aa22.83■■□□□ 1.25
RAB11B-203ENST00000598706 LRRC9Q6ZRR7 1453 aa22.82■■□□□ 1.24
RAB11B-203ENST00000598706 TMEM94Q12767 1356 aa22.82■■□□□ 1.24
RAB11B-203ENST00000598706 MROH1Q8NDA8 1641 aa22.82■■□□□ 1.24
RAB11B-203ENST00000598706 EIF2AK4Q9P2K8 1649 aaKnown RBP22.82■■□□□ 1.24
RAB11B-203ENST00000598706 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
RAB11B-203ENST00000598706 PHLPP1O60346 1717 aa22.8■■□□□ 1.24
RAB11B-203ENST00000598706 UPF1Q92900 1129 aaKnown RBP eCLIP22.77■■□□□ 1.24
RAB11B-203ENST00000598706 EID1Q9Y6B2 187 aa22.77■■□□□ 1.24
RAB11B-203ENST00000598706 TSPY4P0CV99 314 aa22.76■■□□□ 1.23
RAB11B-203ENST00000598706 TSPY10P0CW01 314 aa22.76■■□□□ 1.23
RAB11B-203ENST00000598706 JCADQ9P266 1359 aa22.75■■□□□ 1.23
RAB11B-203ENST00000598706 MAST1Q9Y2H9 1570 aa22.74■■□□□ 1.23
RAB11B-203ENST00000598706 PIK3C2BO00750 1634 aa22.74■■□□□ 1.23
RAB11B-203ENST00000598706 PRDM15P57071 1507 aaPredicted RBP22.72■■□□□ 1.23
RAB11B-203ENST00000598706 KCNA6P17658 529 aa22.71■■□□□ 1.23
RAB11B-203ENST00000598706 TMEM2Q9UHN6 1383 aa22.71■■□□□ 1.23
RAB11B-203ENST00000598706 PROSER2Q86WR7 435 aaPredicted RBP22.7■■□□□ 1.22
RAB11B-203ENST00000598706 RBM33Q96EV2 1170 aaKnown RBP22.7■■□□□ 1.22
RAB11B-203ENST00000598706 NKTRP30414 1462 aaKnown RBP22.7■■□□□ 1.22
RAB11B-203ENST00000598706 COL16A1Q07092 1604 aaPredicted RBP22.69■■□□□ 1.22
RAB11B-203ENST00000598706 NWD1Q149M9 1564 aa22.69■■□□□ 1.22
RAB11B-203ENST00000598706 LRP6O75581 1613 aa22.68■■□□□ 1.22
RAB11B-203ENST00000598706 ARHGAP31Q2M1Z3 1444 aa22.68■■□□□ 1.22
RAB11B-203ENST00000598706 KDM5AP29375 1690 aaKnown RBP22.68■■□□□ 1.22
RAB11B-203ENST00000598706 MSH6P52701 1360 aa22.67■■□□□ 1.22
RAB11B-203ENST00000598706 TRIM52Q96A61 297 aa22.67■■□□□ 1.22
RAB11B-203ENST00000598706 TET3O43151 1660 aa22.67■■□□□ 1.22
RAB11B-203ENST00000598706 SRCAPQ6ZRS2 3230 aa22.66■■□□□ 1.22
RAB11B-203ENST00000598706 EFCAB6Q5THR3 1501 aa22.66■■□□□ 1.22
RAB11B-203ENST00000598706 ZNF772Q68DY9 489 aaPredicted RBP22.65■■□□□ 1.22
RAB11B-203ENST00000598706 SLAIN2Q9P270 581 aa22.64■■□□□ 1.21
RAB11B-203ENST00000598706 SLC26A8Q96RN1 970 aa22.63■■□□□ 1.21
RAB11B-203ENST00000598706 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
RAB11B-203ENST00000598706 SPATA31A6Q5VVP1 1343 aa22.62■■□□□ 1.21
RAB11B-203ENST00000598706 MEX3CQ5U5Q3 659 aaKnown RBP22.62■■□□□ 1.21
RAB11B-203ENST00000598706 STAG3Q9UJ98 1225 aa22.62■■□□□ 1.21
RAB11B-203ENST00000598706 FGD6Q6ZV73 1430 aa22.62■■□□□ 1.21
RAB11B-203ENST00000598706 SHPRHQ149N8 1683 aa22.59■■□□□ 1.21
RAB11B-203ENST00000598706 CDK12Q9NYV4 1490 aaPredicted RBP22.57■■□□□ 1.2
RAB11B-203ENST00000598706 RXRBP28702 533 aa22.55■■□□□ 1.2
RAB11B-203ENST00000598706 CHD2O14647 1828 aaKnown RBP22.54■■□□□ 1.2
RAB11B-203ENST00000598706 AHDC1Q5TGY3 1603 aaPredicted RBP22.54■■□□□ 1.2
RAB11B-203ENST00000598706 ADGRB3O60242 1522 aa22.53■■□□□ 1.2
RAB11B-203ENST00000598706 ERBINQ96RT1 1412 aa22.52■■□□□ 1.2
RAB11B-203ENST00000598706 IDI1Q13907 227 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms