RNA–Protein interactions for RNA: ENST00000598706.1

RAB11B-203, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB11B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-203ENST00000598706 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
RAB11B-203ENST00000598706 ABCC9O60706 1549 aa33.84■■■■□ 3.01
RAB11B-203ENST00000598706 CCDC180Q9P1Z9 1646 aa33.12■■■□□ 2.89
RAB11B-203ENST00000598706 DNAJC5BQ9UF47 199 aa32.42■■■□□ 2.78
RAB11B-203ENST00000598706 RB1CC1Q8TDY2 1594 aa31.89■■■□□ 2.7
RAB11B-203ENST00000598706 NACADO15069 1562 aa31.46■■■□□ 2.63
RAB11B-203ENST00000598706 PABPN1Q86U42 306 aaKnown RBP eCLIP31.33■■■□□ 2.61
RAB11B-203ENST00000598706 UNC13AQ9UPW8 1703 aa31.22■■■□□ 2.59
RAB11B-203ENST00000598706 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
RAB11B-203ENST00000598706 BICRAQ9NZM4 1560 aa30.99■■■□□ 2.55
RAB11B-203ENST00000598706 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
RAB11B-203ENST00000598706 CECR2Q9BXF3 1484 aa30.58■■■□□ 2.49
RAB11B-203ENST00000598706 CC2D2AQ9P2K1 1620 aa30.56■■■□□ 2.48
RAB11B-203ENST00000598706 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
RAB11B-203ENST00000598706 DNAJC5Q9H3Z4 198 aa30.37■■■□□ 2.45
RAB11B-203ENST00000598706 EIF4G1Q04637 1599 aaKnown RBP30.29■■■□□ 2.44
RAB11B-203ENST00000598706 SCRIBQ14160 1630 aa30.1■■■□□ 2.41
RAB11B-203ENST00000598706 DCAF1Q9Y4B6 1507 aa30.06■■■□□ 2.4
RAB11B-203ENST00000598706 ZCCHC6Q5VYS8 1495 aaKnown RBP30.04■■■□□ 2.4
RAB11B-203ENST00000598706 CUX2O14529 1486 aa29.53■■■□□ 2.32
RAB11B-203ENST00000598706 ERCC6Q03468 1493 aa29.29■■■□□ 2.28
RAB11B-203ENST00000598706 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
RAB11B-203ENST00000598706 NESP48681 1621 aa28.84■■■□□ 2.21
RAB11B-203ENST00000598706 ATAD2BQ9ULI0 1458 aa28.83■■■□□ 2.21
RAB11B-203ENST00000598706 HMGXB3Q12766 1538 aa28.78■■■□□ 2.2
RAB11B-203ENST00000598706 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
RAB11B-203ENST00000598706 SMARCA2P51531 1590 aa28.72■■■□□ 2.19
RAB11B-203ENST00000598706 TRIM41Q8WV44 630 aa28.71■■■□□ 2.19
RAB11B-203ENST00000598706 SMARCA4P51532 1647 aa28.63■■■□□ 2.17
RAB11B-203ENST00000598706 LAMC3Q9Y6N6 1575 aa28.54■■■□□ 2.16
RAB11B-203ENST00000598706 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
RAB11B-203ENST00000598706 KIF21AQ7Z4S6 1674 aa28.51■■■□□ 2.15
RAB11B-203ENST00000598706 PDS5BQ9NTI5 1447 aa28.36■■■□□ 2.13
RAB11B-203ENST00000598706 PEG3Q9GZU2 1588 aa28.35■■■□□ 2.13
RAB11B-203ENST00000598706 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
RAB11B-203ENST00000598706 MRC2Q9UBG0 1479 aa28.2■■■□□ 2.1
RAB11B-203ENST00000598706 WDR62O43379 1518 aa28.17■■■□□ 2.1
RAB11B-203ENST00000598706 CADPSQ9ULU8 1353 aa28.09■■■□□ 2.09
RAB11B-203ENST00000598706 MROH2BQ7Z745 1585 aa28.07■■■□□ 2.08
RAB11B-203ENST00000598706 OSCARQ8IYS5 282 aa27.97■■■□□ 2.07
RAB11B-203ENST00000598706 CEP164Q9UPV0 1460 aa27.92■■■□□ 2.06
RAB11B-203ENST00000598706 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
RAB11B-203ENST00000598706 RIMBP3CA6NJZ7 1639 aa27.79■■■□□ 2.04
RAB11B-203ENST00000598706 RIMBP3BA6NNM3 1639 aa27.79■■■□□ 2.04
RAB11B-203ENST00000598706 RIMBP3Q9UFD9 1639 aa27.79■■■□□ 2.04
RAB11B-203ENST00000598706 WIZO95785 1651 aa27.72■■■□□ 2.03
RAB11B-203ENST00000598706 URB2Q14146 1524 aaKnown RBP27.63■■■□□ 2.01
RAB11B-203ENST00000598706 CFTRP13569 1480 aa27.62■■■□□ 2.01
RAB11B-203ENST00000598706 ARHGEF11O15085 1522 aa27.6■■■□□ 2.01
RAB11B-203ENST00000598706 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
RAB11B-203ENST00000598706 PRDM2Q13029 1718 aa27.38■■□□□ 1.97
RAB11B-203ENST00000598706 IFT140Q96RY7 1462 aa27.38■■□□□ 1.97
RAB11B-203ENST00000598706 CYB5RLQ6IPT4 315 aa27.37■■□□□ 1.97
RAB11B-203ENST00000598706 TRHP20396 242 aaPredicted RBP27.34■■□□□ 1.97
RAB11B-203ENST00000598706 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
RAB11B-203ENST00000598706 EIF4G3O43432 1585 aaKnown RBP27.27■■□□□ 1.96
RAB11B-203ENST00000598706 ARAP1Q96P48 1450 aa27.27■■□□□ 1.96
RAB11B-203ENST00000598706 CHD1O14646 1710 aa27.24■■□□□ 1.95
RAB11B-203ENST00000598706 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
RAB11B-203ENST00000598706 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
RAB11B-203ENST00000598706 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
RAB11B-203ENST00000598706 ABCC8Q09428 1581 aa27.05■■□□□ 1.92
RAB11B-203ENST00000598706 AQRO60306 1485 aaKnown RBP eCLIP27.05■■□□□ 1.92
RAB11B-203ENST00000598706 DNMBPQ6XZF7 1577 aa27.04■■□□□ 1.92
RAB11B-203ENST00000598706 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
RAB11B-203ENST00000598706 FBLN2P98095 1184 aa27.01■■□□□ 1.91
RAB11B-203ENST00000598706 CCDC88BA6NC98 1476 aa26.97■■□□□ 1.91
RAB11B-203ENST00000598706 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
RAB11B-203ENST00000598706 POLA1P09884 1462 aaPredicted RBP26.86■■□□□ 1.89
RAB11B-203ENST00000598706 SYNJ1O43426 1573 aa26.79■■□□□ 1.88
RAB11B-203ENST00000598706 SNAPC4Q5SXM2 1469 aa26.78■■□□□ 1.88
RAB11B-203ENST00000598706 RAD54L2Q9Y4B4 1467 aa26.75■■□□□ 1.87
RAB11B-203ENST00000598706 TDRD9Q8NDG6 1382 aaKnown RBP26.73■■□□□ 1.87
RAB11B-203ENST00000598706 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
RAB11B-203ENST00000598706 SOGA1O94964 1423 aa26.69■■□□□ 1.86
RAB11B-203ENST00000598706 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
RAB11B-203ENST00000598706 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
RAB11B-203ENST00000598706 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
RAB11B-203ENST00000598706 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
RAB11B-203ENST00000598706 GRIN2BQ13224 1484 aa26.58■■□□□ 1.85
RAB11B-203ENST00000598706 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
RAB11B-203ENST00000598706 PBRM1Q86U86 1689 aa26.48■■□□□ 1.83
RAB11B-203ENST00000598706 CUX1P39880 1505 aa26.43■■□□□ 1.82
RAB11B-203ENST00000598706 ERCC6L2Q5T890 1561 aa26.39■■□□□ 1.82
RAB11B-203ENST00000598706 KIF13AQ9H1H9 1805 aa26.33■■□□□ 1.81
RAB11B-203ENST00000598706 ABCA5Q8WWZ7 1642 aa26.3■■□□□ 1.8
RAB11B-203ENST00000598706 CEP170Q5SW79 1584 aa26.28■■□□□ 1.8
RAB11B-203ENST00000598706 GRIN2AQ12879 1464 aa26.24■■□□□ 1.79
RAB11B-203ENST00000598706 ABCA10Q8WWZ4 1543 aa26.23■■□□□ 1.79
RAB11B-203ENST00000598706 SHROOM2Q13796 1616 aa26.2■■□□□ 1.78
RAB11B-203ENST00000598706 NUP160Q12769 1436 aa26.18■■□□□ 1.78
RAB11B-203ENST00000598706 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
RAB11B-203ENST00000598706 ILDR1Q86SU0 546 aaPredicted RBP26.06■■□□□ 1.76
RAB11B-203ENST00000598706 ABCC10Q5T3U5 1492 aa26.03■■□□□ 1.76
RAB11B-203ENST00000598706 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
RAB11B-203ENST00000598706 KDM4FA0A1W2PPD8 638 aa26■■□□□ 1.75
RAB11B-203ENST00000598706 FAM69CQ0P6D2 419 aa26■■□□□ 1.75
RAB11B-203ENST00000598706 PRG4Q92954 1404 aaPredicted RBP25.97■■□□□ 1.75
RAB11B-203ENST00000598706 KDM6BO15054 1643 aa25.97■■□□□ 1.75
RAB11B-203ENST00000598706 DIP2BQ9P265 1576 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms