RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 RNF17Q9BXT8 1623 aaKnown RBP20.97■□□□□ 0.95
TMEM38A-202ENST00000595452 ZC3H13Q5T200 1668 aaKnown RBP20.97■□□□□ 0.95
TMEM38A-202ENST00000595452 UHRF1BP1Q6BDS2 1440 aa20.96■□□□□ 0.95
TMEM38A-202ENST00000595452 ERBINQ96RT1 1412 aa20.96■□□□□ 0.95
TMEM38A-202ENST00000595452 CEBPAP49715 358 aaPredicted RBP20.95■□□□□ 0.94
TMEM38A-202ENST00000595452 NPATQ14207 1427 aa20.95■□□□□ 0.94
TMEM38A-202ENST00000595452 ZMYM3Q14202 1370 aa20.94■□□□□ 0.94
TMEM38A-202ENST00000595452 ADGRL2O95490 1459 aa20.91■□□□□ 0.94
TMEM38A-202ENST00000595452 WASHC2CQ9Y4E1 1318 aa20.91■□□□□ 0.94
TMEM38A-202ENST00000595452 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
TMEM38A-202ENST00000595452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.88■□□□□ 0.93
TMEM38A-202ENST00000595452 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
TMEM38A-202ENST00000595452 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
TMEM38A-202ENST00000595452 NCOA1Q15788 1441 aa20.87■□□□□ 0.93
TMEM38A-202ENST00000595452 PRDM15P57071 1507 aaPredicted RBP20.86■□□□□ 0.93
TMEM38A-202ENST00000595452 DEPDC5O75140 1603 aa20.86■□□□□ 0.93
TMEM38A-202ENST00000595452 MYO3AQ8NEV4 1616 aa20.86■□□□□ 0.93
TMEM38A-202ENST00000595452 KANK1Q14678 1352 aa20.85■□□□□ 0.93
TMEM38A-202ENST00000595452 PZPP20742 1482 aa20.85■□□□□ 0.93
TMEM38A-202ENST00000595452 CEP152O94986 1710 aa20.84■□□□□ 0.93
TMEM38A-202ENST00000595452 PTPRKQ15262 1439 aa20.84■□□□□ 0.93
TMEM38A-202ENST00000595452 ABCC3O15438 1527 aa20.83■□□□□ 0.93
TMEM38A-202ENST00000595452 ZNF142P52746 1687 aaPredicted RBP20.83■□□□□ 0.93
TMEM38A-202ENST00000595452 MROH1Q8NDA8 1641 aa20.83■□□□□ 0.93
TMEM38A-202ENST00000595452 CAMSAP1Q5T5Y3 1602 aa20.82■□□□□ 0.92
TMEM38A-202ENST00000595452 HSPA2P54652 639 aa20.81■□□□□ 0.92
TMEM38A-202ENST00000595452 ROCK1Q13464 1354 aa20.81■□□□□ 0.92
TMEM38A-202ENST00000595452 RRBP1Q9P2E9 1410 aaKnown RBP20.79■□□□□ 0.92
TMEM38A-202ENST00000595452 ANKRD50Q9ULJ7 1429 aa20.79■□□□□ 0.92
TMEM38A-202ENST00000595452 CEP170BQ9Y4F5 1589 aaPredicted RBP20.79■□□□□ 0.92
TMEM38A-202ENST00000595452 TNRQ92752 1358 aa20.77■□□□□ 0.92
TMEM38A-202ENST00000595452 ITGAEP38570 1179 aa20.77■□□□□ 0.92
TMEM38A-202ENST00000595452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.91
TMEM38A-202ENST00000595452 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
TMEM38A-202ENST00000595452 NLRP1Q9C000 1473 aa20.74■□□□□ 0.91
TMEM38A-202ENST00000595452 A2ML1A8K2U0 1454 aa20.73■□□□□ 0.91
TMEM38A-202ENST00000595452 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
TMEM38A-202ENST00000595452 ARHGAP31Q2M1Z3 1444 aa20.72■□□□□ 0.91
TMEM38A-202ENST00000595452 LMTK2Q8IWU2 1503 aa20.72■□□□□ 0.91
TMEM38A-202ENST00000595452 CFAP65Q6ZU64 1925 aaKnown RBP20.71■□□□□ 0.91
TMEM38A-202ENST00000595452 UNC13BO14795 1591 aa20.71■□□□□ 0.91
TMEM38A-202ENST00000595452 ERVK-7P63135 1459 aa20.7■□□□□ 0.9
TMEM38A-202ENST00000595452 STRCQ7RTU9 1775 aa20.7■□□□□ 0.9
TMEM38A-202ENST00000595452 VWDEQ8N2E2 1590 aa20.7■□□□□ 0.9
TMEM38A-202ENST00000595452 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
TMEM38A-202ENST00000595452 FBXO31Q5XUX0 539 aaPredicted RBP20.69■□□□□ 0.9
TMEM38A-202ENST00000595452 EFCAB6Q5THR3 1501 aa20.68■□□□□ 0.9
TMEM38A-202ENST00000595452 TET3O43151 1660 aa20.67■□□□□ 0.9
TMEM38A-202ENST00000595452 GCC2Q8IWJ2 1684 aa20.67■□□□□ 0.9
TMEM38A-202ENST00000595452 UGGT1Q9NYU2 1555 aa20.66■□□□□ 0.9
TMEM38A-202ENST00000595452 POLR1AO95602 1720 aaPredicted RBP20.65■□□□□ 0.9
TMEM38A-202ENST00000595452 RPRD2Q5VT52 1461 aaKnown RBP20.64■□□□□ 0.89
TMEM38A-202ENST00000595452 PTPRTO14522 1441 aa20.63■□□□□ 0.89
TMEM38A-202ENST00000595452 IQGAP3Q86VI3 1631 aa20.63■□□□□ 0.89
TMEM38A-202ENST00000595452 PKD2Q13563 968 aa20.62■□□□□ 0.89
TMEM38A-202ENST00000595452 THEMISQ8N1K5 641 aaPredicted RBP20.62■□□□□ 0.89
TMEM38A-202ENST00000595452 UBR1Q8IWV7 1749 aa20.58■□□□□ 0.88
TMEM38A-202ENST00000595452 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.88
TMEM38A-202ENST00000595452 NUP155O75694 1391 aa20.57■□□□□ 0.88
TMEM38A-202ENST00000595452 HFM1A2PYH4 1435 aa20.56■□□□□ 0.88
TMEM38A-202ENST00000595452 NAIPQ13075 1403 aa20.55■□□□□ 0.88
TMEM38A-202ENST00000595452 STAG3Q9UJ98 1225 aa20.55■□□□□ 0.88
TMEM38A-202ENST00000595452 PIK3C2BO00750 1634 aa20.54■□□□□ 0.88
TMEM38A-202ENST00000595452 ANKLE2Q86XL3 938 aa20.54■□□□□ 0.88
TMEM38A-202ENST00000595452 NCKAP5LQ9HCH0 1330 aa20.53■□□□□ 0.88
TMEM38A-202ENST00000595452 SYNMO15061 1565 aa20.53■□□□□ 0.88
TMEM38A-202ENST00000595452 E9PCH4 1651 aa20.53■□□□□ 0.88
TMEM38A-202ENST00000595452 NOS1P29475 1434 aa20.53■□□□□ 0.88
TMEM38A-202ENST00000595452 SLC52A1Q9NWF4 448 aa20.51■□□□□ 0.87
TMEM38A-202ENST00000595452 ADGRB3O60242 1522 aa20.49■□□□□ 0.87
TMEM38A-202ENST00000595452 IQGAP1P46940 1657 aa20.48■□□□□ 0.87
TMEM38A-202ENST00000595452 NEURL4Q96JN8 1562 aa20.48■□□□□ 0.87
TMEM38A-202ENST00000595452 EID1Q9Y6B2 187 aa20.47■□□□□ 0.87
TMEM38A-202ENST00000595452 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
TMEM38A-202ENST00000595452 SLIT1O75093 1534 aa20.47■□□□□ 0.87
TMEM38A-202ENST00000595452 SPHKAPQ2M3C7 1700 aa20.47■□□□□ 0.87
TMEM38A-202ENST00000595452 MED14O60244 1454 aa20.46■□□□□ 0.87
TMEM38A-202ENST00000595452 SCAF11Q99590 1463 aaKnown RBP20.46■□□□□ 0.87
TMEM38A-202ENST00000595452 NPHP4O75161 1426 aaPredicted RBP20.45■□□□□ 0.86
TMEM38A-202ENST00000595452 IDI1Q13907 227 aa20.44■□□□□ 0.86
TMEM38A-202ENST00000595452 TRIM52Q96A61 297 aa20.44■□□□□ 0.86
TMEM38A-202ENST00000595452 ARHGAP23Q9P227 1491 aa20.43■□□□□ 0.86
TMEM38A-202ENST00000595452 CERKQ8TCT0 537 aa20.42■□□□□ 0.86
TMEM38A-202ENST00000595452 TMEM2Q9UHN6 1383 aa20.41■□□□□ 0.86
TMEM38A-202ENST00000595452 MYO5BQ9ULV0 1848 aa20.39■□□□□ 0.86
TMEM38A-202ENST00000595452 IQSEC2Q5JU85 1478 aa20.39■□□□□ 0.85
TMEM38A-202ENST00000595452 HDGFP51858 240 aaKnown RBP20.39■□□□□ 0.85
TMEM38A-202ENST00000595452 TXNDC2Q86VQ3 553 aa20.39■□□□□ 0.85
TMEM38A-202ENST00000595452 FBXO41Q8TF61 875 aa20.39■□□□□ 0.85
TMEM38A-202ENST00000595452 TMEM131LA2VDJ0 1609 aa20.38■□□□□ 0.85
TMEM38A-202ENST00000595452 LTBP4Q8N2S1 1624 aa20.38■□□□□ 0.85
TMEM38A-202ENST00000595452 CPS1P31327 1500 aa20.37■□□□□ 0.85
TMEM38A-202ENST00000595452 CHGAP10645 457 aaKnown RBP20.36■□□□□ 0.85
TMEM38A-202ENST00000595452 SLC4A1APQ9BWU0 796 aaKnown RBP20.36■□□□□ 0.85
TMEM38A-202ENST00000595452 TRPM2O94759 1503 aa20.36■□□□□ 0.85
TMEM38A-202ENST00000595452 ZNF335Q9H4Z2 1342 aaPredicted RBP20.35■□□□□ 0.85
TMEM38A-202ENST00000595452 SETD5Q9C0A6 1442 aa20.34■□□□□ 0.85
TMEM38A-202ENST00000595452 KIF1BO60333 1816 aa20.34■□□□□ 0.85
TMEM38A-202ENST00000595452 PPP1R15AO75807 674 aaPredicted RBP20.33■□□□□ 0.85
TMEM38A-202ENST00000595452 ILDR1Q86SU0 546 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms