RNA–Protein interactions for RNA: ENST00000593990.1

FARP1-209, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-209ENST00000593990 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
FARP1-209ENST00000593990 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
FARP1-209ENST00000593990 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
FARP1-209ENST00000593990 CHD1O14646 1710 aa13.07□□□□□ -0.32
FARP1-209ENST00000593990 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
FARP1-209ENST00000593990 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
FARP1-209ENST00000593990 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
FARP1-209ENST00000593990 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
FARP1-209ENST00000593990 SLC34A2O95436 690 aa13.05□□□□□ -0.32
FARP1-209ENST00000593990 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
FARP1-209ENST00000593990 CUX1P39880 1505 aa13.04□□□□□ -0.32
FARP1-209ENST00000593990 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.32
FARP1-209ENST00000593990 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.33
FARP1-209ENST00000593990 DSG2Q14126 1118 aa13.02□□□□□ -0.33
FARP1-209ENST00000593990 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
FARP1-209ENST00000593990 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
FARP1-209ENST00000593990 WDR97A6NE52 1622 aa13.01□□□□□ -0.33
FARP1-209ENST00000593990 RIMBP3CA6NJZ7 1639 aa13□□□□□ -0.33
FARP1-209ENST00000593990 RIMBP3BA6NNM3 1639 aa13□□□□□ -0.33
FARP1-209ENST00000593990 RIMBP3Q9UFD9 1639 aa13□□□□□ -0.33
FARP1-209ENST00000593990 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
FARP1-209ENST00000593990 FOXK1P85037 733 aa12.99□□□□□ -0.33
FARP1-209ENST00000593990 ABCC8Q09428 1581 aa12.98□□□□□ -0.33
FARP1-209ENST00000593990 SEMA3EO15041 775 aa12.97□□□□□ -0.33
FARP1-209ENST00000593990 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
FARP1-209ENST00000593990 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.33
FARP1-209ENST00000593990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
FARP1-209ENST00000593990 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
FARP1-209ENST00000593990 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
FARP1-209ENST00000593990 TESPA1A2RU30 521 aaPredicted RBP12.93□□□□□ -0.34
FARP1-209ENST00000593990 NUDT7P0C024 238 aa12.93□□□□□ -0.34
FARP1-209ENST00000593990 PLPP6Q8IY26 295 aa12.93□□□□□ -0.34
FARP1-209ENST00000593990 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
FARP1-209ENST00000593990 SOGA1O94964 1423 aa12.92□□□□□ -0.34
FARP1-209ENST00000593990 PTGER2P43116 358 aa12.92□□□□□ -0.34
FARP1-209ENST00000593990 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
FARP1-209ENST00000593990 ARHGEF11O15085 1522 aa12.9□□□□□ -0.34
FARP1-209ENST00000593990 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
FARP1-209ENST00000593990 TULP1O00294 542 aaPredicted RBP12.9□□□□□ -0.34
FARP1-209ENST00000593990 PBX2P40425 430 aa12.9□□□□□ -0.34
FARP1-209ENST00000593990 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
FARP1-209ENST00000593990 SYNJ1O43426 1573 aa12.9□□□□□ -0.35
FARP1-209ENST00000593990 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
FARP1-209ENST00000593990 DPYSL4O14531 572 aa12.88□□□□□ -0.35
FARP1-209ENST00000593990 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
FARP1-209ENST00000593990 TBC1D12O60347 775 aa12.87□□□□□ -0.35
FARP1-209ENST00000593990 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
FARP1-209ENST00000593990 BIVM-ERCC5R4GMW8 1640 aa12.86□□□□□ -0.35
FARP1-209ENST00000593990 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
FARP1-209ENST00000593990 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
FARP1-209ENST00000593990 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
FARP1-209ENST00000593990 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.35
FARP1-209ENST00000593990 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
FARP1-209ENST00000593990 PDIA6Q15084 440 aa12.82□□□□□ -0.36
FARP1-209ENST00000593990 SMYD5Q6GMV2 418 aa12.82□□□□□ -0.36
FARP1-209ENST00000593990 ARAP1Q96P48 1450 aa12.82□□□□□ -0.36
FARP1-209ENST00000593990 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
FARP1-209ENST00000593990 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
FARP1-209ENST00000593990 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
FARP1-209ENST00000593990 MLLT3P42568 568 aaPredicted RBP12.79□□□□□ -0.36
FARP1-209ENST00000593990 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
FARP1-209ENST00000593990 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
FARP1-209ENST00000593990 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
FARP1-209ENST00000593990 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
FARP1-209ENST00000593990 OXER1Q8TDS5 423 aa12.77□□□□□ -0.37
FARP1-209ENST00000593990 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
FARP1-209ENST00000593990 MAGI1Q96QZ7 1491 aaPredicted RBP12.77□□□□□ -0.37
FARP1-209ENST00000593990 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.37
FARP1-209ENST00000593990 ARHGAP33O14559 1287 aa12.75□□□□□ -0.37
FARP1-209ENST00000593990 ADAMTS12P58397 1594 aa12.75□□□□□ -0.37
FARP1-209ENST00000593990 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
FARP1-209ENST00000593990 WRNQ14191 1432 aaPredicted RBP eCLIP12.74□□□□□ -0.37
FARP1-209ENST00000593990 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
FARP1-209ENST00000593990 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
FARP1-209ENST00000593990 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
FARP1-209ENST00000593990 CYB5RLQ6IPT4 315 aa12.72□□□□□ -0.37
FARP1-209ENST00000593990 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
FARP1-209ENST00000593990 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
FARP1-209ENST00000593990 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
FARP1-209ENST00000593990 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
FARP1-209ENST00000593990 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
FARP1-209ENST00000593990 GRIN2AQ12879 1464 aa12.67□□□□□ -0.38
FARP1-209ENST00000593990 TK2O00142 265 aa12.66□□□□□ -0.38
FARP1-209ENST00000593990 EVI5O60447 810 aa12.65□□□□□ -0.38
FARP1-209ENST00000593990 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
FARP1-209ENST00000593990 SHROOM2Q13796 1616 aa12.64□□□□□ -0.39
FARP1-209ENST00000593990 GRXCR2A6NFK2 248 aa12.64□□□□□ -0.39
FARP1-209ENST00000593990 GPIHBP1Q8IV16 184 aa12.63□□□□□ -0.39
FARP1-209ENST00000593990 NUP160Q12769 1436 aa12.62□□□□□ -0.39
FARP1-209ENST00000593990 ZMYND10O75800 440 aa12.62□□□□□ -0.39
FARP1-209ENST00000593990 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
FARP1-209ENST00000593990 DDX12PQ92771 950 aa12.6□□□□□ -0.39
FARP1-209ENST00000593990 RUSC2Q8N2Y8 1516 aa12.58□□□□□ -0.4
FARP1-209ENST00000593990 FHAD1B1AJZ9 1412 aa12.58□□□□□ -0.4
FARP1-209ENST00000593990 OSBPP22059 807 aa12.58□□□□□ -0.4
FARP1-209ENST00000593990 PSEN2P49810 448 aa12.58□□□□□ -0.4
FARP1-209ENST00000593990 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
FARP1-209ENST00000593990 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
FARP1-209ENST00000593990 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
FARP1-209ENST00000593990 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms