RNA–Protein interactions for RNA: ENST00000593990.1

FARP1-209, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-209ENST00000593990 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
FARP1-209ENST00000593990 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
FARP1-209ENST00000593990 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
FARP1-209ENST00000593990 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
FARP1-209ENST00000593990 FOXD1Q16676 465 aa23.67■■□□□ 1.38
FARP1-209ENST00000593990 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
FARP1-209ENST00000593990 MSH5O43196 834 aa22.25■■□□□ 1.15
FARP1-209ENST00000593990 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
FARP1-209ENST00000593990 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
FARP1-209ENST00000593990 ADRA2BP18089 450 aa22.12■■□□□ 1.13
FARP1-209ENST00000593990 POTEDQ86YR6 584 aa21.39■■□□□ 1.01
FARP1-209ENST00000593990 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
FARP1-209ENST00000593990 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
FARP1-209ENST00000593990 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
FARP1-209ENST00000593990 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
FARP1-209ENST00000593990 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
FARP1-209ENST00000593990 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
FARP1-209ENST00000593990 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
FARP1-209ENST00000593990 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
FARP1-209ENST00000593990 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
FARP1-209ENST00000593990 KCNA4P22459 653 aa19.29■□□□□ 0.68
FARP1-209ENST00000593990 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
FARP1-209ENST00000593990 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
FARP1-209ENST00000593990 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
FARP1-209ENST00000593990 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
FARP1-209ENST00000593990 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
FARP1-209ENST00000593990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
FARP1-209ENST00000593990 SLC4A1APQ9BWU0 796 aaKnown RBP18.42■□□□□ 0.54
FARP1-209ENST00000593990 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
FARP1-209ENST00000593990 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
FARP1-209ENST00000593990 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
FARP1-209ENST00000593990 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
FARP1-209ENST00000593990 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
FARP1-209ENST00000593990 APLP2Q06481 763 aa17.91■□□□□ 0.46
FARP1-209ENST00000593990 CAPN15O75808 1086 aa17.9■□□□□ 0.46
FARP1-209ENST00000593990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
FARP1-209ENST00000593990 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
FARP1-209ENST00000593990 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
FARP1-209ENST00000593990 ZBTB22O15209 634 aa17.77■□□□□ 0.44
FARP1-209ENST00000593990 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
FARP1-209ENST00000593990 DSG3P32926 999 aa17.74■□□□□ 0.43
FARP1-209ENST00000593990 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
FARP1-209ENST00000593990 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
FARP1-209ENST00000593990 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
FARP1-209ENST00000593990 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
FARP1-209ENST00000593990 ABCB7O75027 752 aa17.42■□□□□ 0.38
FARP1-209ENST00000593990 POLA2Q14181 598 aa17.18■□□□□ 0.34
FARP1-209ENST00000593990 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
FARP1-209ENST00000593990 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
FARP1-209ENST00000593990 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
FARP1-209ENST00000593990 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
FARP1-209ENST00000593990 POTEHQ6S545 545 aa16.82■□□□□ 0.28
FARP1-209ENST00000593990 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
FARP1-209ENST00000593990 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
FARP1-209ENST00000593990 FBLN2P98095 1184 aa16.57■□□□□ 0.24
FARP1-209ENST00000593990 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
FARP1-209ENST00000593990 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
FARP1-209ENST00000593990 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
FARP1-209ENST00000593990 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
FARP1-209ENST00000593990 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
FARP1-209ENST00000593990 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
FARP1-209ENST00000593990 FKBP8Q14318 412 aa16.23■□□□□ 0.19
FARP1-209ENST00000593990 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
FARP1-209ENST00000593990 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
FARP1-209ENST00000593990 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
FARP1-209ENST00000593990 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
FARP1-209ENST00000593990 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
FARP1-209ENST00000593990 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
FARP1-209ENST00000593990 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
FARP1-209ENST00000593990 ABCC9O60706 1549 aa16■□□□□ 0.15
FARP1-209ENST00000593990 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
FARP1-209ENST00000593990 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
FARP1-209ENST00000593990 HAX1O00165 279 aa15.86■□□□□ 0.13
FARP1-209ENST00000593990 SP7Q8TDD2 431 aaPredicted RBP15.84■□□□□ 0.13
FARP1-209ENST00000593990 PRKAR2AP13861 404 aaKnown RBP15.83■□□□□ 0.12
FARP1-209ENST00000593990 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
FARP1-209ENST00000593990 PRR29P0C7W0 189 aa15.79■□□□□ 0.12
FARP1-209ENST00000593990 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
FARP1-209ENST00000593990 PROM2Q8N271 834 aa15.63■□□□□ 0.09
FARP1-209ENST00000593990 CHADLQ6NUI6 762 aa15.6■□□□□ 0.09
FARP1-209ENST00000593990 C19orf67A6NJJ6 358 aa15.57■□□□□ 0.08
FARP1-209ENST00000593990 EVX2Q03828 476 aa15.53■□□□□ 0.08
FARP1-209ENST00000593990 FBXO3Q9UK99 471 aa15.53■□□□□ 0.08
FARP1-209ENST00000593990 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
FARP1-209ENST00000593990 RTN4Q9NQC3 1192 aaKnown RBP15.5■□□□□ 0.07
FARP1-209ENST00000593990 FARP1Q9Y4F1 1045 aaPredicted RBP15.47■□□□□ 0.07
FARP1-209ENST00000593990 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
FARP1-209ENST00000593990 CD44P16070 742 aaKnown RBP15.34■□□□□ 0.05
FARP1-209ENST00000593990 VASPP50552 380 aaPredicted RBP15.32■□□□□ 0.04
FARP1-209ENST00000593990 GABBR2O75899 941 aa15.29■□□□□ 0.04
FARP1-209ENST00000593990 CLCN6P51797 869 aa15.29■□□□□ 0.04
FARP1-209ENST00000593990 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
FARP1-209ENST00000593990 RB1CC1Q8TDY2 1594 aa15.17■□□□□ 0.02
FARP1-209ENST00000593990 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
FARP1-209ENST00000593990 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
FARP1-209ENST00000593990 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
FARP1-209ENST00000593990 ZNF579Q8NAF0 562 aaKnown RBP15.13■□□□□ 0.01
FARP1-209ENST00000593990 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
FARP1-209ENST00000593990 MNX1P50219 401 aaPredicted RBP15.08■□□□□ 0
FARP1-209ENST00000593990 NACADO15069 1562 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms