RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.95■■□□□ 1.742e-7■□□□□ 9.9
MBD3-207ENST00000590550 RALGAPBQ86X10 1494 aa25.95■■□□□ 1.74
MBD3-207ENST00000590550 UHRF1BP1Q6BDS2 1440 aa25.94■■□□□ 1.74
MBD3-207ENST00000590550 TMC1Q8TDI8 760 aa25.93■■□□□ 1.74
MBD3-207ENST00000590550 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.93■■□□□ 1.74
MBD3-207ENST00000590550 ERICH6BQ5W0A0 696 aa25.9■■□□□ 1.74
MBD3-207ENST00000590550 PNISRQ8TF01 805 aaKnown RBP25.9■■□□□ 1.74
MBD3-207ENST00000590550 ROCK2O75116 1388 aaKnown RBP25.89■■□□□ 1.73
MBD3-207ENST00000590550 SAMD9LQ8IVG5 1584 aa25.88■■□□□ 1.73
MBD3-207ENST00000590550 ARID4BQ4LE39 1312 aaPredicted RBP25.86■■□□□ 1.73
MBD3-207ENST00000590550 NBPF1Q3BBV0 1214 aa25.86■■□□□ 1.73
MBD3-207ENST00000590550 RTL5Q5HYW3 569 aaPredicted RBP25.85■■□□□ 1.73
MBD3-207ENST00000590550 CCDC141Q6ZP82 1450 aa25.85■■□□□ 1.73
MBD3-207ENST00000590550 NUDCQ9Y266 331 aa25.85■■□□□ 1.73
MBD3-207ENST00000590550 ARHGEF12Q9NZN5 1544 aa25.85■■□□□ 1.73
MBD3-207ENST00000590550 KDM5DQ9BY66 1539 aa25.84■■□□□ 1.73
MBD3-207ENST00000590550 FAM135AQ9P2D6 1515 aa25.84■■□□□ 1.73
MBD3-207ENST00000590550 SMG6Q86US8 1419 aaKnown RBP25.84■■□□□ 1.73
MBD3-207ENST00000590550 CDC42BPBQ9Y5S2 1711 aa25.83■■□□□ 1.73
MBD3-207ENST00000590550 SYCP2Q9BX26 1530 aa25.81■■□□□ 1.72
MBD3-207ENST00000590550 ARHGEF5Q12774 1597 aa25.81■■□□□ 1.72
MBD3-207ENST00000590550 CCDC144AA2RUR9 1427 aa25.8■■□□□ 1.72
MBD3-207ENST00000590550 ARHGAP5Q13017 1502 aa25.77■■□□□ 1.72
MBD3-207ENST00000590550 PREX2Q70Z35 1606 aa25.76■■□□□ 1.71
MBD3-207ENST00000590550 TTC37Q6PGP7 1564 aa25.76■■□□□ 1.71
MBD3-207ENST00000590550 MYBBP1AQ9BQG0 1328 aaKnown RBP25.74■■□□□ 1.71
MBD3-207ENST00000590550 PLA2R1Q13018 1463 aa25.74■■□□□ 1.71
MBD3-207ENST00000590550 PRAG1Q86YV5 1406 aa25.73■■□□□ 1.71
MBD3-207ENST00000590550 PLEKHH2Q8IVE3 1493 aa25.72■■□□□ 1.71
MBD3-207ENST00000590550 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
MBD3-207ENST00000590550 RSPH4AQ5TD94 716 aa25.71■■□□□ 1.71
MBD3-207ENST00000590550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.7■■□□□ 1.74e-7■■■□□ 17
MBD3-207ENST00000590550 RALBP1Q15311 655 aa25.69■■□□□ 1.7
MBD3-207ENST00000590550 CC2D1BQ5T0F9 858 aaKnown RBP25.68■■□□□ 1.7
MBD3-207ENST00000590550 CHD1O14646 1710 aa25.68■■□□□ 1.7
MBD3-207ENST00000590550 A2MP01023 1474 aa25.68■■□□□ 1.7
MBD3-207ENST00000590550 BRD4O60885 1362 aaPredicted RBP25.67■■□□□ 1.7
MBD3-207ENST00000590550 LRPPRCP42704 1394 aaKnown RBP25.67■■□□□ 1.7
MBD3-207ENST00000590550 RNF123Q5XPI4 1314 aa25.67■■□□□ 1.7
MBD3-207ENST00000590550 DISP3Q9P2K9 1392 aa25.65■■□□□ 1.7
MBD3-207ENST00000590550 ANP32AP39687 249 aaKnown RBP25.65■■□□□ 1.7
MBD3-207ENST00000590550 TRPM1Q7Z4N2 1603 aa25.65■■□□□ 1.7
MBD3-207ENST00000590550 ZBTB47Q9UFB7 747 aaPredicted RBP25.65■■□□□ 1.7
MBD3-207ENST00000590550 UBE2Q2Q8WVN8 375 aa25.63■■□□□ 1.69
MBD3-207ENST00000590550 IPO9Q96P70 1041 aaKnown RBP25.63■■□□□ 1.69
MBD3-207ENST00000590550 KTN1Q86UP2 1357 aaKnown RBP25.63■■□□□ 1.69
MBD3-207ENST00000590550 PER1O15534 1290 aaPredicted RBP25.62■■□□□ 1.69
MBD3-207ENST00000590550 TESK2Q96S53 571 aa25.62■■□□□ 1.69
MBD3-207ENST00000590550 E9PCH4 1651 aa25.62■■□□□ 1.69
MBD3-207ENST00000590550 NLRP13Q86W25 1043 aa25.61■■□□□ 1.69
MBD3-207ENST00000590550 PANK3Q9H999 370 aa25.59■■□□□ 1.69
MBD3-207ENST00000590550 PARD3Q8TEW0 1356 aa25.58■■□□□ 1.69
MBD3-207ENST00000590550 UNC13BO14795 1591 aa25.58■■□□□ 1.69
MBD3-207ENST00000590550 CDCA7LQ96GN5 454 aa25.57■■□□□ 1.68
MBD3-207ENST00000590550 GPRASP1Q5JY77 1395 aa25.55■■□□□ 1.68
MBD3-207ENST00000590550 ABCC2Q92887 1545 aa25.54■■□□□ 1.68
MBD3-207ENST00000590550 MYO5CQ9NQX4 1742 aa25.53■■□□□ 1.68
MBD3-207ENST00000590550 MAST1Q9Y2H9 1570 aa25.53■■□□□ 1.68
MBD3-207ENST00000590550 EXOC6Q8TAG9 804 aa25.53■■□□□ 1.68
MBD3-207ENST00000590550 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
MBD3-207ENST00000590550 RRP1P56182 461 aaKnown RBP25.52■■□□□ 1.68
MBD3-207ENST00000590550 RCAN3Q9UKA8 241 aa25.52■■□□□ 1.68
MBD3-207ENST00000590550 ERBINQ96RT1 1412 aa25.52■■□□□ 1.68
MBD3-207ENST00000590550 AFAP1Q8N556 730 aa25.51■■□□□ 1.67
MBD3-207ENST00000590550 TRAPPC8Q9Y2L5 1435 aa25.51■■□□□ 1.67
MBD3-207ENST00000590550 IQGAP3Q86VI3 1631 aa25.51■■□□□ 1.67
MBD3-207ENST00000590550 EIF5BO60841 1220 aaKnown RBP25.5■■□□□ 1.67
MBD3-207ENST00000590550 EFCAB2Q5VUJ9 269 aa25.5■■□□□ 1.67
MBD3-207ENST00000590550 SHROOM2Q13796 1616 aa25.49■■□□□ 1.67
MBD3-207ENST00000590550 TMF1P82094 1093 aa25.49■■□□□ 1.67
MBD3-207ENST00000590550 LAS1LQ9Y4W2 734 aaKnown RBP25.49■■□□□ 1.67
MBD3-207ENST00000590550 PRDM15P57071 1507 aaPredicted RBP25.49■■□□□ 1.67
MBD3-207ENST00000590550 PLXNC1O60486 1568 aa25.49■■□□□ 1.67
MBD3-207ENST00000590550 DUOX2Q9NRD8 1548 aa25.48■■□□□ 1.67
MBD3-207ENST00000590550 NPM2Q86SE8 214 aaKnown RBP25.47■■□□□ 1.67
MBD3-207ENST00000590550 PLCH2O75038 1416 aa25.46■■□□□ 1.67
MBD3-207ENST00000590550 PLIN1O60240 522 aa25.46■■□□□ 1.67
MBD3-207ENST00000590550 NEFMP07197 916 aa25.44■■□□□ 1.66
MBD3-207ENST00000590550 SPAG9O60271 1321 aaKnown RBP25.42■■□□□ 1.66
MBD3-207ENST00000590550 MAGI2Q86UL8 1455 aa25.4■■□□□ 1.66
MBD3-207ENST00000590550 ZCCHC11Q5TAX3 1644 aaKnown RBP25.4■■□□□ 1.66
MBD3-207ENST00000590550 ATP10AO60312 1499 aa25.38■■□□□ 1.65
MBD3-207ENST00000590550 BRPF3Q9ULD4 1205 aa25.38■■□□□ 1.65
MBD3-207ENST00000590550 ADAMTS8Q9UP79 889 aa25.37■■□□□ 1.65
MBD3-207ENST00000590550 ABCC1P33527 1531 aa25.37■■□□□ 1.65
MBD3-207ENST00000590550 EIF2AK4Q9P2K8 1649 aaKnown RBP25.37■■□□□ 1.65
MBD3-207ENST00000590550 LAMC1P11047 1609 aa25.35■■□□□ 1.65
MBD3-207ENST00000590550 PDE3BQ13370 1112 aa25.35■■□□□ 1.65
MBD3-207ENST00000590550 WASHC2CQ9Y4E1 1318 aa25.35■■□□□ 1.65
MBD3-207ENST00000590550 SKAP1Q86WV1 359 aa25.34■■□□□ 1.65
MBD3-207ENST00000590550 KNSTRNQ9Y448 316 aa25.33■■□□□ 1.65
MBD3-207ENST00000590550 WDR7Q9Y4E6 1490 aa25.31■■□□□ 1.64
MBD3-207ENST00000590550 BLMP54132 1417 aaPredicted RBP25.31■■□□□ 1.64
MBD3-207ENST00000590550 PPP2R1AP30153 589 aa25.3■■□□□ 1.64
MBD3-207ENST00000590550 KIF3BO15066 747 aa25.29■■□□□ 1.64
MBD3-207ENST00000590550 RNF17Q9BXT8 1623 aaKnown RBP25.28■■□□□ 1.64
MBD3-207ENST00000590550 MADDQ8WXG6 1647 aa25.28■■□□□ 1.64
MBD3-207ENST00000590550 CRBNQ96SW2 442 aa25.27■■□□□ 1.64
MBD3-207ENST00000590550 AMER1Q5JTC6 1135 aaPredicted RBP25.27■■□□□ 1.64
MBD3-207ENST00000590550 C20orf194Q5TEA3 1177 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms