RNA–Protein interactions for RNA: ENST00000589493.1

BECN1-210, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-210ENST00000589493 FKBP8Q14318 412 aa12.55□□□□□ -0.4
BECN1-210ENST00000589493 ARHGEF12Q9NZN5 1544 aa12.55□□□□□ -0.4
BECN1-210ENST00000589493 ARHGEF5Q12774 1597 aa12.55□□□□□ -0.4
BECN1-210ENST00000589493 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
BECN1-210ENST00000589493 ADGRL2O95490 1459 aa12.54□□□□□ -0.4
BECN1-210ENST00000589493 CHIC2Q9UKJ5 165 aa12.54□□□□□ -0.4
BECN1-210ENST00000589493 SAMD9LQ8IVG5 1584 aa12.54□□□□□ -0.4
BECN1-210ENST00000589493 CFAP74Q9C0B2 1584 aa12.54□□□□□ -0.4
BECN1-210ENST00000589493 TSPOAP1O95153 1857 aa12.54□□□□□ -0.4
BECN1-210ENST00000589493 ACIN1Q9UKV3 1341 aaKnown RBP12.54□□□□□ -0.4
BECN1-210ENST00000589493 DNMT1P26358 1616 aaKnown RBP12.54□□□□□ -0.4
BECN1-210ENST00000589493 FANCAO15360 1455 aa12.53□□□□□ -0.4
BECN1-210ENST00000589493 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
BECN1-210ENST00000589493 RAB3GAP2Q9H2M9 1393 aa12.53□□□□□ -0.4
BECN1-210ENST00000589493 CCDC141Q6ZP82 1450 aa12.52□□□□□ -0.41
BECN1-210ENST00000589493 MYO5CQ9NQX4 1742 aa12.51□□□□□ -0.41
BECN1-210ENST00000589493 RRP7BPQ9NSQ0 103 aa12.51□□□□□ -0.41
BECN1-210ENST00000589493 ANKRD30AQ9BXX3 1397 aa12.51□□□□□ -0.41
BECN1-210ENST00000589493 TRAPPC8Q9Y2L5 1435 aa12.51□□□□□ -0.41
BECN1-210ENST00000589493 NEO1Q92859 1461 aa12.51□□□□□ -0.41
BECN1-210ENST00000589493 CD44P16070 742 aaKnown RBP12.5□□□□□ -0.41
BECN1-210ENST00000589493 AFAP1Q8N556 730 aa12.5□□□□□ -0.41
BECN1-210ENST00000589493 RTEL1-TNFRSF6BF6WH68 1400 aa12.5□□□□□ -0.41
BECN1-210ENST00000589493 SCAPERQ9BY12 1400 aa12.5□□□□□ -0.41
BECN1-210ENST00000589493 ABCC1P33527 1531 aa12.49□□□□□ -0.41
BECN1-210ENST00000589493 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
BECN1-210ENST00000589493 PPRC1Q5VV67 1664 aaKnown RBP12.48□□□□□ -0.41
BECN1-210ENST00000589493 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
BECN1-210ENST00000589493 DHX57Q6P158 1386 aaKnown RBP12.47□□□□□ -0.41
BECN1-210ENST00000589493 MAST1Q9Y2H9 1570 aa12.47□□□□□ -0.41
BECN1-210ENST00000589493 ADGRL1O94910 1474 aa12.46□□□□□ -0.41
BECN1-210ENST00000589493 CLSPNQ9HAW4 1339 aa12.46□□□□□ -0.41
BECN1-210ENST00000589493 MNX1P50219 401 aaPredicted RBP12.46□□□□□ -0.41
BECN1-210ENST00000589493 KDM6BO15054 1643 aa12.46□□□□□ -0.41
BECN1-210ENST00000589493 SPAG9O60271 1321 aaKnown RBP12.45□□□□□ -0.42
BECN1-210ENST00000589493 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
BECN1-210ENST00000589493 ANKRD50Q9ULJ7 1429 aa12.43□□□□□ -0.42
BECN1-210ENST00000589493 KIF15Q9NS87 1388 aa12.43□□□□□ -0.42
BECN1-210ENST00000589493 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
BECN1-210ENST00000589493 ZNF518AQ6AHZ1 1483 aa12.42□□□□□ -0.42
BECN1-210ENST00000589493 MLH3Q9UHC1 1453 aa12.42□□□□□ -0.42
BECN1-210ENST00000589493 GABBR2O75899 941 aa12.42□□□□□ -0.42
BECN1-210ENST00000589493 POGZQ7Z3K3 1410 aa12.42□□□□□ -0.42
BECN1-210ENST00000589493 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
BECN1-210ENST00000589493 CROCC2H7BZ55 1655 aa12.41□□□□□ -0.42
BECN1-210ENST00000589493 RAPGEF3O95398 923 aa12.4□□□□□ -0.42
BECN1-210ENST00000589493 DHX29Q7Z478 1369 aaKnown RBP12.39□□□□□ -0.43
BECN1-210ENST00000589493 KDM5CP41229 1560 aa12.39□□□□□ -0.43
BECN1-210ENST00000589493 MPHOSPH9Q99550 1183 aa12.38□□□□□ -0.43
BECN1-210ENST00000589493 PLXNC1O60486 1568 aa12.38□□□□□ -0.43
BECN1-210ENST00000589493 DUOX2Q9NRD8 1548 aa12.37□□□□□ -0.43
BECN1-210ENST00000589493 GCC2Q8IWJ2 1684 aa12.37□□□□□ -0.43
BECN1-210ENST00000589493 ZFYVE16Q7Z3T8 1539 aa12.37□□□□□ -0.43
BECN1-210ENST00000589493 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
BECN1-210ENST00000589493 COL17A1Q9UMD9 1497 aaPredicted RBP12.36□□□□□ -0.43
BECN1-210ENST00000589493 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
BECN1-210ENST00000589493 ADGBQ8N7X0 1667 aa12.35□□□□□ -0.43
BECN1-210ENST00000589493 TRIM52Q96A61 297 aa12.35□□□□□ -0.43
BECN1-210ENST00000589493 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
BECN1-210ENST00000589493 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
BECN1-210ENST00000589493 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
BECN1-210ENST00000589493 MIER1Q8N108 512 aa12.34□□□□□ -0.43
BECN1-210ENST00000589493 RICTORQ6R327 1708 aa12.34□□□□□ -0.43
BECN1-210ENST00000589493 NUP155O75694 1391 aa12.32□□□□□ -0.44
BECN1-210ENST00000589493 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
BECN1-210ENST00000589493 PZPP20742 1482 aa12.32□□□□□ -0.44
BECN1-210ENST00000589493 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
BECN1-210ENST00000589493 KDM5DQ9BY66 1539 aa12.32□□□□□ -0.44
BECN1-210ENST00000589493 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
BECN1-210ENST00000589493 A2MP01023 1474 aa12.31□□□□□ -0.44
BECN1-210ENST00000589493 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
BECN1-210ENST00000589493 FRMPD1Q5SYB0 1578 aa12.3□□□□□ -0.44
BECN1-210ENST00000589493 ANKRD30BQ9BXX2 1392 aa12.29□□□□□ -0.44
BECN1-210ENST00000589493 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
BECN1-210ENST00000589493 KIF3BO15066 747 aa12.28□□□□□ -0.44
BECN1-210ENST00000589493 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
BECN1-210ENST00000589493 ATP10AO60312 1499 aa12.27□□□□□ -0.44
BECN1-210ENST00000589493 HECW2Q9P2P5 1572 aa12.27□□□□□ -0.44
BECN1-210ENST00000589493 PKD2Q13563 968 aa12.27□□□□□ -0.45
BECN1-210ENST00000589493 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
BECN1-210ENST00000589493 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
BECN1-210ENST00000589493 SIN3AQ96ST3 1273 aa12.26□□□□□ -0.45
BECN1-210ENST00000589493 CLCN6P51797 869 aa12.25□□□□□ -0.45
BECN1-210ENST00000589493 PLCD3Q8N3E9 789 aa12.25□□□□□ -0.45
BECN1-210ENST00000589493 ARHGEF40Q8TER5 1519 aa12.25□□□□□ -0.45
BECN1-210ENST00000589493 UNC13BO14795 1591 aa12.25□□□□□ -0.45
BECN1-210ENST00000589493 VWDEQ8N2E2 1590 aa12.24□□□□□ -0.45
BECN1-210ENST00000589493 DIP2CQ9Y2E4 1556 aa12.24□□□□□ -0.45
BECN1-210ENST00000589493 EIF2AK4Q9P2K8 1649 aaKnown RBP12.23□□□□□ -0.45
BECN1-210ENST00000589493 REREQ9P2R6 1566 aa12.23□□□□□ -0.45
BECN1-210ENST00000589493 AGLP35573 1532 aa12.22□□□□□ -0.45
BECN1-210ENST00000589493 FAM135AQ9P2D6 1515 aa12.22□□□□□ -0.45
BECN1-210ENST00000589493 PHF12Q96QT6 1004 aa12.22□□□□□ -0.45
BECN1-210ENST00000589493 ABCA6Q8N139 1617 aa12.22□□□□□ -0.45
BECN1-210ENST00000589493 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.45
BECN1-210ENST00000589493 KANK1Q14678 1352 aa12.21□□□□□ -0.45
BECN1-210ENST00000589493 BCORL1Q5H9F3 1711 aa12.21□□□□□ -0.45
BECN1-210ENST00000589493 DEPDC5O75140 1603 aa12.21□□□□□ -0.46
BECN1-210ENST00000589493 PLA2R1Q13018 1463 aa12.2□□□□□ -0.46
BECN1-210ENST00000589493 IQGAP3Q86VI3 1631 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms