RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 ROCK2O75116 1388 aaKnown RBP18.63■□□□□ 0.57
KDM4B-208ENST00000589104 ERICH6Q7L0X2 663 aa18.63■□□□□ 0.57
KDM4B-208ENST00000589104 ANKRD30AQ9BXX3 1397 aa18.63■□□□□ 0.57
KDM4B-208ENST00000589104 USP47Q96K76 1375 aa18.62■□□□□ 0.57
KDM4B-208ENST00000589104 COL17A1Q9UMD9 1497 aaPredicted RBP18.62■□□□□ 0.57
KDM4B-208ENST00000589104 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
KDM4B-208ENST00000589104 CARMIL2Q6F5E8 1435 aa18.6■□□□□ 0.57
KDM4B-208ENST00000589104 ATP1B4Q9UN42 357 aaPredicted RBP18.59■□□□□ 0.57
KDM4B-208ENST00000589104 MYO3AQ8NEV4 1616 aa18.59■□□□□ 0.57
KDM4B-208ENST00000589104 A2MP01023 1474 aa18.59■□□□□ 0.57
KDM4B-208ENST00000589104 CHIC2Q9UKJ5 165 aa18.58■□□□□ 0.56
KDM4B-208ENST00000589104 PARD3Q8TEW0 1356 aa18.58■□□□□ 0.56
KDM4B-208ENST00000589104 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
KDM4B-208ENST00000589104 FOXD1Q16676 465 aa18.57■□□□□ 0.56
KDM4B-208ENST00000589104 ABCC1P33527 1531 aa18.57■□□□□ 0.56
KDM4B-208ENST00000589104 ABCC2Q92887 1545 aa18.57■□□□□ 0.56
KDM4B-208ENST00000589104 DUOX2Q9NRD8 1548 aa18.57■□□□□ 0.56
KDM4B-208ENST00000589104 UHRF1BP1LA0JNW5 1464 aa18.56■□□□□ 0.56
KDM4B-208ENST00000589104 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
KDM4B-208ENST00000589104 ZCCHC11Q5TAX3 1644 aaKnown RBP18.55■□□□□ 0.56
KDM4B-208ENST00000589104 INO80Q9ULG1 1556 aaPredicted RBP18.54■□□□□ 0.56
KDM4B-208ENST00000589104 MROH1Q8NDA8 1641 aa18.54■□□□□ 0.56
KDM4B-208ENST00000589104 ZC3H13Q5T200 1668 aaKnown RBP18.54■□□□□ 0.56
KDM4B-208ENST00000589104 ABCA9Q8IUA7 1624 aa18.53■□□□□ 0.56
KDM4B-208ENST00000589104 PPP4R2Q9NY27 417 aa18.53■□□□□ 0.56
KDM4B-208ENST00000589104 TRPM2O94759 1503 aa18.53■□□□□ 0.56
KDM4B-208ENST00000589104 ERBINQ96RT1 1412 aa18.53■□□□□ 0.56
KDM4B-208ENST00000589104 SYNMO15061 1565 aa18.52■□□□□ 0.55
KDM4B-208ENST00000589104 BRD4O60885 1362 aaPredicted RBP18.51■□□□□ 0.55
KDM4B-208ENST00000589104 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
KDM4B-208ENST00000589104 PNISRQ8TF01 805 aaKnown RBP18.5■□□□□ 0.55
KDM4B-208ENST00000589104 TET3O43151 1660 aa18.49■□□□□ 0.55
KDM4B-208ENST00000589104 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
KDM4B-208ENST00000589104 VIRMAQ69YN4 1812 aaKnown RBP18.48■□□□□ 0.55
KDM4B-208ENST00000589104 ZFYVE16Q7Z3T8 1539 aa18.48■□□□□ 0.55
KDM4B-208ENST00000589104 CDK11AQ9UQ88 783 aaPredicted RBP18.47■□□□□ 0.55
KDM4B-208ENST00000589104 ANO8Q9HCE9 1232 aaPredicted RBP18.47■□□□□ 0.55
KDM4B-208ENST00000589104 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
KDM4B-208ENST00000589104 KIF15Q9NS87 1388 aa18.46■□□□□ 0.55
KDM4B-208ENST00000589104 PTPRTO14522 1441 aa18.46■□□□□ 0.55
KDM4B-208ENST00000589104 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.54
KDM4B-208ENST00000589104 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.54
KDM4B-208ENST00000589104 CLTCL1P53675 1640 aa18.45■□□□□ 0.54
KDM4B-208ENST00000589104 PER1O15534 1290 aaPredicted RBP18.44■□□□□ 0.54
KDM4B-208ENST00000589104 NEFLP07196 543 aa18.44■□□□□ 0.54
KDM4B-208ENST00000589104 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
KDM4B-208ENST00000589104 CFDP1Q9UEE9 299 aaPredicted RBP18.42■□□□□ 0.54
KDM4B-208ENST00000589104 SCAPERQ9BY12 1400 aa18.41■□□□□ 0.54
KDM4B-208ENST00000589104 NRXN1Q9ULB1 1477 aa18.41■□□□□ 0.54
KDM4B-208ENST00000589104 JPH4Q96JJ6 628 aa18.41■□□□□ 0.54
KDM4B-208ENST00000589104 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
KDM4B-208ENST00000589104 USP32Q8NFA0 1604 aa18.4■□□□□ 0.54
KDM4B-208ENST00000589104 PKD2Q13563 968 aa18.39■□□□□ 0.53
KDM4B-208ENST00000589104 WASHC2CQ9Y4E1 1318 aa18.38■□□□□ 0.53
KDM4B-208ENST00000589104 RTEL1-TNFRSF6BF6WH68 1400 aa18.37■□□□□ 0.53
KDM4B-208ENST00000589104 SHPRHQ149N8 1683 aa18.37■□□□□ 0.53
KDM4B-208ENST00000589104 MROH2AA6NES4 1674 aa18.36■□□□□ 0.53
KDM4B-208ENST00000589104 TESK2Q96S53 571 aa18.36■□□□□ 0.53
KDM4B-208ENST00000589104 RSPH4AQ5TD94 716 aa18.35■□□□□ 0.53
KDM4B-208ENST00000589104 NUP155O75694 1391 aa18.35■□□□□ 0.53
KDM4B-208ENST00000589104 LMTK2Q8IWU2 1503 aa18.35■□□□□ 0.53
KDM4B-208ENST00000589104 MRS2Q9HD23 443 aa18.35■□□□□ 0.53
KDM4B-208ENST00000589104 PLCH2O75038 1416 aa18.34■□□□□ 0.53
KDM4B-208ENST00000589104 PPRC1Q5VV67 1664 aaKnown RBP18.34■□□□□ 0.53
KDM4B-208ENST00000589104 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
KDM4B-208ENST00000589104 ABCA6Q8N139 1617 aa18.33■□□□□ 0.52
KDM4B-208ENST00000589104 MAP3K4Q9Y6R4 1608 aa18.33■□□□□ 0.52
KDM4B-208ENST00000589104 MYOM2P54296 1465 aa18.32■□□□□ 0.52
KDM4B-208ENST00000589104 SETBP1Q9Y6X0 1596 aa18.31■□□□□ 0.52
KDM4B-208ENST00000589104 KDM5AP29375 1690 aaKnown RBP18.31■□□□□ 0.52
KDM4B-208ENST00000589104 RALBP1Q15311 655 aa18.31■□□□□ 0.52
KDM4B-208ENST00000589104 ARHGAP5Q13017 1502 aa18.3■□□□□ 0.52
KDM4B-208ENST00000589104 DISP3Q9P2K9 1392 aa18.29■□□□□ 0.52
KDM4B-208ENST00000589104 CCDC136Q96JN2 1154 aa18.29■□□□□ 0.52
KDM4B-208ENST00000589104 NPC1L1Q9UHC9 1359 aa18.28■□□□□ 0.52
KDM4B-208ENST00000589104 PPLO60437 1756 aa18.28■□□□□ 0.52
KDM4B-208ENST00000589104 PIK3C2BO00750 1634 aa18.26■□□□□ 0.51
KDM4B-208ENST00000589104 ZNF521Q96K83 1311 aa18.25■□□□□ 0.51
KDM4B-208ENST00000589104 CCDC144AA2RUR9 1427 aa18.25■□□□□ 0.51
KDM4B-208ENST00000589104 KIDINS220Q9ULH0 1771 aa18.25■□□□□ 0.51
KDM4B-208ENST00000589104 EFCAB6Q5THR3 1501 aa18.24■□□□□ 0.51
KDM4B-208ENST00000589104 ZNF518AQ6AHZ1 1483 aa18.23■□□□□ 0.51
KDM4B-208ENST00000589104 ADGRB3O60242 1522 aa18.22■□□□□ 0.51
KDM4B-208ENST00000589104 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
KDM4B-208ENST00000589104 KIF1BO60333 1816 aa18.22■□□□□ 0.51
KDM4B-208ENST00000589104 IRX6P78412 446 aaPredicted RBP18.21■□□□□ 0.51
KDM4B-208ENST00000589104 ST20-MTHFSA0A0A6YYL1 179 aa18.2■□□□□ 0.5
KDM4B-208ENST00000589104 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
KDM4B-208ENST00000589104 PLEKHD1A6NEE1 506 aa18.2■□□□□ 0.5
KDM4B-208ENST00000589104 FAM9BQ8IZU0 186 aa18.19■□□□□ 0.5
KDM4B-208ENST00000589104 ATP7AQ04656 1500 aa18.19■□□□□ 0.5
KDM4B-208ENST00000589104 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
KDM4B-208ENST00000589104 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
KDM4B-208ENST00000589104 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
KDM4B-208ENST00000589104 FRMPD1Q5SYB0 1578 aa18.17■□□□□ 0.5
KDM4B-208ENST00000589104 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
KDM4B-208ENST00000589104 TRAPPC8Q9Y2L5 1435 aa18.17■□□□□ 0.5
KDM4B-208ENST00000589104 SCAF11Q99590 1463 aaKnown RBP18.16■□□□□ 0.5
KDM4B-208ENST00000589104 ADGRB1O14514 1584 aa18.16■□□□□ 0.5
KDM4B-208ENST00000589104 DEKP35659 375 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms