RNA–Protein interactions for RNA: ENST00000589039.5

GCDH-209, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-209ENST00000589039 MROH1Q8NDA8 1641 aa23.17■■□□□ 1.3
GCDH-209ENST00000589039 ADAMTSL3P82987 1691 aa23.16■■□□□ 1.3
GCDH-209ENST00000589039 FER1L4A9Z1Z3 1794 aa23.16■■□□□ 1.3
GCDH-209ENST00000589039 PRDM15P57071 1507 aaPredicted RBP23.14■■□□□ 1.3
GCDH-209ENST00000589039 ZC3H13Q5T200 1668 aaKnown RBP23.12■■□□□ 1.29
GCDH-209ENST00000589039 FAM135AQ9P2D6 1515 aa23.12■■□□□ 1.29
GCDH-209ENST00000589039 MADDQ8WXG6 1647 aa23.11■■□□□ 1.29
GCDH-209ENST00000589039 CEP152O94986 1710 aa23.11■■□□□ 1.29
GCDH-209ENST00000589039 VWDEQ8N2E2 1590 aa23.1■■□□□ 1.29
GCDH-209ENST00000589039 GGT6Q6P531 493 aa23.09■■□□□ 1.29
GCDH-209ENST00000589039 RAB3GAP2Q9H2M9 1393 aa23.09■■□□□ 1.29
GCDH-209ENST00000589039 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
GCDH-209ENST00000589039 MLECQ14165 292 aa23.08■■□□□ 1.29
GCDH-209ENST00000589039 CLTCQ00610 1675 aaKnown RBP23.08■■□□□ 1.29
GCDH-209ENST00000589039 KDM5DQ9BY66 1539 aa23.08■■□□□ 1.28
GCDH-209ENST00000589039 PCGF6Q9BYE7 350 aa23.07■■□□□ 1.28
GCDH-209ENST00000589039 PPP6R1Q9UPN7 881 aa23.07■■□□□ 1.28
GCDH-209ENST00000589039 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
GCDH-209ENST00000589039 RIMS1Q86UR5 1692 aaKnown RBP23.06■■□□□ 1.28
GCDH-209ENST00000589039 ACIN1Q9UKV3 1341 aaKnown RBP23.06■■□□□ 1.28
GCDH-209ENST00000589039 KANK1Q14678 1352 aa23.04■■□□□ 1.28
GCDH-209ENST00000589039 HRCP23327 699 aa23.04■■□□□ 1.28
GCDH-209ENST00000589039 ABCC3O15438 1527 aa23.03■■□□□ 1.28
GCDH-209ENST00000589039 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
GCDH-209ENST00000589039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.02■■□□□ 1.28
GCDH-209ENST00000589039 TET3O43151 1660 aa23.02■■□□□ 1.28
GCDH-209ENST00000589039 LMTK2Q8IWU2 1503 aa23.02■■□□□ 1.28
GCDH-209ENST00000589039 CNTLNQ9NXG0 1405 aa23.01■■□□□ 1.27
GCDH-209ENST00000589039 NUP155O75694 1391 aa23.01■■□□□ 1.27
GCDH-209ENST00000589039 WASHC2CQ9Y4E1 1318 aa22.99■■□□□ 1.27
GCDH-209ENST00000589039 KDM4FA0A1W2PPD8 638 aa22.98■■□□□ 1.27
GCDH-209ENST00000589039 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
GCDH-209ENST00000589039 C3P01024 1663 aa22.97■■□□□ 1.27
GCDH-209ENST00000589039 TRIM52Q96A61 297 aa22.97■■□□□ 1.27
GCDH-209ENST00000589039 CFAP65Q6ZU64 1925 aaKnown RBP22.97■■□□□ 1.27
GCDH-209ENST00000589039 EFCAB6Q5THR3 1501 aa22.96■■□□□ 1.27
GCDH-209ENST00000589039 PZPP20742 1482 aa22.95■■□□□ 1.26
GCDH-209ENST00000589039 E9PCH4 1651 aa22.94■■□□□ 1.26
GCDH-209ENST00000589039 ARHGAP31Q2M1Z3 1444 aa22.91■■□□□ 1.26
GCDH-209ENST00000589039 ZMYM3Q14202 1370 aa22.9■■□□□ 1.26
GCDH-209ENST00000589039 PTPRMP28827 1452 aa22.89■■□□□ 1.25
GCDH-209ENST00000589039 PREX1Q8TCU6 1659 aa22.89■■□□□ 1.25
GCDH-209ENST00000589039 RPRD2Q5VT52 1461 aaKnown RBP22.88■■□□□ 1.25
GCDH-209ENST00000589039 NPATQ14207 1427 aa22.87■■□□□ 1.25
GCDH-209ENST00000589039 SLC4A1APQ9BWU0 796 aaKnown RBP22.86■■□□□ 1.25
GCDH-209ENST00000589039 SPHKAPQ2M3C7 1700 aa22.85■■□□□ 1.25
GCDH-209ENST00000589039 SETD1BQ9UPS6 1966 aaKnown RBP22.85■■□□□ 1.25
GCDH-209ENST00000589039 MPHOSPH9Q99550 1183 aa22.85■■□□□ 1.25
GCDH-209ENST00000589039 SPATA31D1Q6ZQQ2 1576 aa22.83■■□□□ 1.25
GCDH-209ENST00000589039 ERVK-7P63135 1459 aa22.81■■□□□ 1.24
GCDH-209ENST00000589039 PKD2Q13563 968 aa22.81■■□□□ 1.24
GCDH-209ENST00000589039 CEBPAP49715 358 aaPredicted RBP22.8■■□□□ 1.24
GCDH-209ENST00000589039 NOS1P29475 1434 aa22.78■■□□□ 1.24
GCDH-209ENST00000589039 SYNMO15061 1565 aa22.77■■□□□ 1.24
GCDH-209ENST00000589039 MYO3AQ8NEV4 1616 aa22.77■■□□□ 1.24
GCDH-209ENST00000589039 FBXO31Q5XUX0 539 aaPredicted RBP22.76■■□□□ 1.23
GCDH-209ENST00000589039 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
GCDH-209ENST00000589039 PTPRTO14522 1441 aa22.75■■□□□ 1.23
GCDH-209ENST00000589039 PLPPR3Q6T4P5 718 aa22.75■■□□□ 1.23
GCDH-209ENST00000589039 ZNF142P52746 1687 aaPredicted RBP22.74■■□□□ 1.23
GCDH-209ENST00000589039 TRPM2O94759 1503 aa22.74■■□□□ 1.23
GCDH-209ENST00000589039 PIK3C2BO00750 1634 aa22.74■■□□□ 1.23
GCDH-209ENST00000589039 TNRQ92752 1358 aa22.73■■□□□ 1.23
GCDH-209ENST00000589039 FOXD1Q16676 465 aa22.72■■□□□ 1.23
GCDH-209ENST00000589039 PLA2R1Q13018 1463 aa22.71■■□□□ 1.23
GCDH-209ENST00000589039 KIF1BO60333 1816 aa22.69■■□□□ 1.22
GCDH-209ENST00000589039 CLTCL1P53675 1640 aa22.68■■□□□ 1.22
GCDH-209ENST00000589039 NLRP1Q9C000 1473 aa22.67■■□□□ 1.22
GCDH-209ENST00000589039 ANKRD30BQ9BXX2 1392 aa22.67■■□□□ 1.22
GCDH-209ENST00000589039 KDM5AP29375 1690 aaKnown RBP22.67■■□□□ 1.22
GCDH-209ENST00000589039 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
GCDH-209ENST00000589039 MYO5BQ9ULV0 1848 aa22.66■■□□□ 1.22
GCDH-209ENST00000589039 SLC52A1Q9NWF4 448 aa22.65■■□□□ 1.22
GCDH-209ENST00000589039 CEP170BQ9Y4F5 1589 aaPredicted RBP22.64■■□□□ 1.22
GCDH-209ENST00000589039 UBR1Q8IWV7 1749 aa22.64■■□□□ 1.21
GCDH-209ENST00000589039 A2ML1A8K2U0 1454 aa22.62■■□□□ 1.21
GCDH-209ENST00000589039 CCDC144AA2RUR9 1427 aa22.62■■□□□ 1.21
GCDH-209ENST00000589039 UHRF1BP1Q6BDS2 1440 aa22.62■■□□□ 1.21
GCDH-209ENST00000589039 TMEM131LA2VDJ0 1609 aa22.6■■□□□ 1.21
GCDH-209ENST00000589039 IDI1Q13907 227 aa22.6■■□□□ 1.21
GCDH-209ENST00000589039 ADGRB3O60242 1522 aa22.6■■□□□ 1.21
GCDH-209ENST00000589039 LMTK3Q96Q04 1460 aa22.59■■□□□ 1.21
GCDH-209ENST00000589039 NEURL4Q96JN8 1562 aa22.56■■□□□ 1.2
GCDH-209ENST00000589039 CLSPNQ9HAW4 1339 aa22.55■■□□□ 1.2
GCDH-209ENST00000589039 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
GCDH-209ENST00000589039 SPATA31E1Q6ZUB1 1445 aa22.5■■□□□ 1.19
GCDH-209ENST00000589039 STAG3Q9UJ98 1225 aa22.5■■□□□ 1.19
GCDH-209ENST00000589039 IFT172Q9UG01 1749 aa22.5■■□□□ 1.19
GCDH-209ENST00000589039 POLR1AO95602 1720 aaPredicted RBP22.49■■□□□ 1.19
GCDH-209ENST00000589039 PPLO60437 1756 aa22.49■■□□□ 1.19
GCDH-209ENST00000589039 CHGAP10645 457 aaKnown RBP22.48■■□□□ 1.19
GCDH-209ENST00000589039 THEMISQ8N1K5 641 aaPredicted RBP22.48■■□□□ 1.19
GCDH-209ENST00000589039 SLIT1O75093 1534 aa22.47■■□□□ 1.19
GCDH-209ENST00000589039 SIN3AQ96ST3 1273 aa22.46■■□□□ 1.19
GCDH-209ENST00000589039 ARHGAP23Q9P227 1491 aa22.46■■□□□ 1.19
GCDH-209ENST00000589039 NEXMIFQ5QGS0 1516 aa22.44■■□□□ 1.18
GCDH-209ENST00000589039 TMEM2Q9UHN6 1383 aa22.43■■□□□ 1.18
GCDH-209ENST00000589039 STRCQ7RTU9 1775 aa22.42■■□□□ 1.18
GCDH-209ENST00000589039 ZFYVE9O95405 1425 aa22.41■■□□□ 1.18
GCDH-209ENST00000589039 NEUROD1Q13562 356 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms