RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 DEPDC5O75140 1603 aa30.01■■■□□ 2.39
DNMT1-216ENST00000588952 UNC13BO14795 1591 aa29.98■■■□□ 2.39
DNMT1-216ENST00000588952 MLECQ14165 292 aa29.97■■■□□ 2.39
DNMT1-216ENST00000588952 PRDM15P57071 1507 aaPredicted RBP29.96■■■□□ 2.39
DNMT1-216ENST00000588952 GGT6Q6P531 493 aa29.95■■■□□ 2.39
DNMT1-216ENST00000588952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.91■■■□□ 2.383e-7■■■□□ 18.9
DNMT1-216ENST00000588952 VWDEQ8N2E2 1590 aa29.9■■■□□ 2.38
DNMT1-216ENST00000588952 ADAMTSL3P82987 1691 aa29.87■■■□□ 2.37
DNMT1-216ENST00000588952 KDM5DQ9BY66 1539 aa29.86■■■□□ 2.37
DNMT1-216ENST00000588952 ABCC3O15438 1527 aa29.86■■■□□ 2.37
DNMT1-216ENST00000588952 NUP155O75694 1391 aa29.85■■■□□ 2.37
DNMT1-216ENST00000588952 IQGAP3Q86VI3 1631 aa29.85■■■□□ 2.37
DNMT1-216ENST00000588952 CEP152O94986 1710 aa29.85■■■□□ 2.37
DNMT1-216ENST00000588952 HRCP23327 699 aa29.84■■■□□ 2.37
DNMT1-216ENST00000588952 MADDQ8WXG6 1647 aa29.83■■■□□ 2.37
DNMT1-216ENST00000588952 TRIM52Q96A61 297 aa29.83■■■□□ 2.37
DNMT1-216ENST00000588952 FER1L4A9Z1Z3 1794 aa29.82■■■□□ 2.36
DNMT1-216ENST00000588952 PZPP20742 1482 aa29.82■■■□□ 2.36
DNMT1-216ENST00000588952 CLTCQ00610 1675 aaKnown RBP29.82■■■□□ 2.36
DNMT1-216ENST00000588952 FAM135AQ9P2D6 1515 aa29.81■■■□□ 2.36
DNMT1-216ENST00000588952 KANK1Q14678 1352 aa29.8■■■□□ 2.36
DNMT1-216ENST00000588952 LMTK2Q8IWU2 1503 aa29.8■■■□□ 2.36
DNMT1-216ENST00000588952 ZC3H13Q5T200 1668 aaKnown RBP29.79■■■□□ 2.36
DNMT1-216ENST00000588952 PPP6R1Q9UPN7 881 aa29.79■■■□□ 2.36
DNMT1-216ENST00000588952 WASHC2CQ9Y4E1 1318 aa29.78■■■□□ 2.36
DNMT1-216ENST00000588952 RIMS1Q86UR5 1692 aaKnown RBP29.76■■■□□ 2.35
DNMT1-216ENST00000588952 CAMSAP1Q5T5Y3 1602 aa29.75■■■□□ 2.35
DNMT1-216ENST00000588952 TET3O43151 1660 aa29.74■■■□□ 2.35
DNMT1-216ENST00000588952 CNTLNQ9NXG0 1405 aa29.72■■■□□ 2.35
DNMT1-216ENST00000588952 EFCAB6Q5THR3 1501 aa29.72■■■□□ 2.35
DNMT1-216ENST00000588952 KDM4FA0A1W2PPD8 638 aa29.72■■■□□ 2.35
DNMT1-216ENST00000588952 MROH2AA6NES4 1674 aa29.71■■■□□ 2.35
DNMT1-216ENST00000588952 ACIN1Q9UKV3 1341 aaKnown RBP29.7■■■□□ 2.34
DNMT1-216ENST00000588952 ESF1Q9H501 851 aaKnown RBP29.69■■■□□ 2.34
DNMT1-216ENST00000588952 MPHOSPH9Q99550 1183 aa29.68■■■□□ 2.34
DNMT1-216ENST00000588952 SLC4A1APQ9BWU0 796 aaKnown RBP29.68■■■□□ 2.34
DNMT1-216ENST00000588952 E9PCH4 1651 aa29.68■■■□□ 2.34
DNMT1-216ENST00000588952 ZMYM3Q14202 1370 aa29.67■■■□□ 2.34
DNMT1-216ENST00000588952 NPATQ14207 1427 aa29.66■■■□□ 2.34
DNMT1-216ENST00000588952 C3P01024 1663 aa29.66■■■□□ 2.34
DNMT1-216ENST00000588952 ARHGAP31Q2M1Z3 1444 aa29.64■■■□□ 2.34
DNMT1-216ENST00000588952 PKD2Q13563 968 aa29.63■■■□□ 2.33
DNMT1-216ENST00000588952 CEBPAP49715 358 aaPredicted RBP29.62■■■□□ 2.33
DNMT1-216ENST00000588952 DHX57Q6P158 1386 aaKnown RBP29.62■■■□□ 2.33
DNMT1-216ENST00000588952 PTPRMP28827 1452 aa29.61■■■□□ 2.33
DNMT1-216ENST00000588952 FOXD1Q16676 465 aa29.61■■■□□ 2.33
DNMT1-216ENST00000588952 RPRD2Q5VT52 1461 aaKnown RBP29.58■■■□□ 2.33
DNMT1-216ENST00000588952 FBXO31Q5XUX0 539 aaPredicted RBP29.57■■■□□ 2.32
DNMT1-216ENST00000588952 PLPPR3Q6T4P5 718 aa29.57■■■□□ 2.32
DNMT1-216ENST00000588952 PREX1Q8TCU6 1659 aa29.56■■■□□ 2.32
DNMT1-216ENST00000588952 ERVK-7P63135 1459 aa29.55■■■□□ 2.32
DNMT1-216ENST00000588952 CFAP65Q6ZU64 1925 aaKnown RBP29.55■■■□□ 2.32
DNMT1-216ENST00000588952 SPATA31D1Q6ZQQ2 1576 aa29.53■■■□□ 2.32
DNMT1-216ENST00000588952 PLA2R1Q13018 1463 aa29.53■■■□□ 2.32
DNMT1-216ENST00000588952 NOS1P29475 1434 aa29.53■■■□□ 2.32
DNMT1-216ENST00000588952 SYNMO15061 1565 aa29.51■■■□□ 2.31
DNMT1-216ENST00000588952 SPHKAPQ2M3C7 1700 aa29.51■■■□□ 2.31
DNMT1-216ENST00000588952 PTPRTO14522 1441 aa29.5■■■□□ 2.31
DNMT1-216ENST00000588952 TRPM2O94759 1503 aa29.45■■■□□ 2.31
DNMT1-216ENST00000588952 UGGT1Q9NYU2 1555 aa29.45■■■□□ 2.31
DNMT1-216ENST00000588952 ANKRD30BQ9BXX2 1392 aa29.45■■■□□ 2.31
DNMT1-216ENST00000588952 TNRQ92752 1358 aa29.44■■■□□ 2.3
DNMT1-216ENST00000588952 CLTCL1P53675 1640 aa29.4■■■□□ 2.3
DNMT1-216ENST00000588952 PIK3C2BO00750 1634 aa29.39■■■□□ 2.3
DNMT1-216ENST00000588952 MYO3AQ8NEV4 1616 aa29.37■■■□□ 2.29
DNMT1-216ENST00000588952 IDI1Q13907 227 aa29.33■■■□□ 2.29
DNMT1-216ENST00000588952 CCDC144AA2RUR9 1427 aa29.31■■■□□ 2.28
DNMT1-216ENST00000588952 CCER1Q8TC90 406 aaPredicted RBP29.31■■■□□ 2.28
DNMT1-216ENST00000588952 NLRP1Q9C000 1473 aa29.3■■■□□ 2.28
DNMT1-216ENST00000588952 SLC52A1Q9NWF4 448 aa29.3■■■□□ 2.28
DNMT1-216ENST00000588952 SETD1BQ9UPS6 1966 aaKnown RBP29.28■■■□□ 2.28
DNMT1-216ENST00000588952 SIN3AQ96ST3 1273 aa29.28■■■□□ 2.28
DNMT1-216ENST00000588952 ZNF142P52746 1687 aaPredicted RBP29.27■■■□□ 2.28
DNMT1-216ENST00000588952 CEP170BQ9Y4F5 1589 aaPredicted RBP29.26■■■□□ 2.28
DNMT1-216ENST00000588952 A2ML1A8K2U0 1454 aa29.26■■■□□ 2.27
DNMT1-216ENST00000588952 ADGRB3O60242 1522 aa29.25■■■□□ 2.27
DNMT1-216ENST00000588952 TMEM131LA2VDJ0 1609 aa29.24■■■□□ 2.27
DNMT1-216ENST00000588952 UHRF1BP1Q6BDS2 1440 aa29.24■■■□□ 2.27
DNMT1-216ENST00000588952 UBR1Q8IWV7 1749 aa29.23■■■□□ 2.27
DNMT1-216ENST00000588952 MYO5BQ9ULV0 1848 aa29.22■■■□□ 2.27
DNMT1-216ENST00000588952 KIF1BO60333 1816 aa29.21■■■□□ 2.27
DNMT1-216ENST00000588952 SPATA31E1Q6ZUB1 1445 aa29.2■■■□□ 2.27
DNMT1-216ENST00000588952 CLSPNQ9HAW4 1339 aa29.2■■■□□ 2.26
DNMT1-216ENST00000588952 CHGAP10645 457 aaKnown RBP29.19■■■□□ 2.26
DNMT1-216ENST00000588952 KDM5AP29375 1690 aaKnown RBP29.18■■■□□ 2.26
DNMT1-216ENST00000588952 NEUROD1Q13562 356 aa29.18■■■□□ 2.26
DNMT1-216ENST00000588952 LMTK3Q96Q04 1460 aa29.17■■■□□ 2.26
DNMT1-216ENST00000588952 NEURL4Q96JN8 1562 aa29.14■■■□□ 2.26
DNMT1-216ENST00000588952 STAG3Q9UJ98 1225 aa29.13■■■□□ 2.25
DNMT1-216ENST00000588952 RGL3Q3MIN7 710 aa29.1■■■□□ 2.25
DNMT1-216ENST00000588952 NEXMIFQ5QGS0 1516 aa29.07■■■□□ 2.24
DNMT1-216ENST00000588952 ARHGAP23Q9P227 1491 aa29.07■■■□□ 2.24
DNMT1-216ENST00000588952 SLIT1O75093 1534 aa29.06■■■□□ 2.24
DNMT1-216ENST00000588952 ZFYVE9O95405 1425 aa29.06■■■□□ 2.24
DNMT1-216ENST00000588952 TMEM2Q9UHN6 1383 aa29.06■■■□□ 2.24
DNMT1-216ENST00000588952 ZNF326Q5BKZ1 582 aaKnown RBP29.06■■■□□ 2.24
DNMT1-216ENST00000588952 THEMISQ8N1K5 641 aaPredicted RBP29.06■■■□□ 2.24
DNMT1-216ENST00000588952 HSPA2P54652 639 aa29.05■■■□□ 2.24
DNMT1-216ENST00000588952 IFT172Q9UG01 1749 aa29.05■■■□□ 2.24
DNMT1-216ENST00000588952 RIMS2Q9UQ26 1411 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms