RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 KIF3BO15066 747 aa15.39■□□□□ 0.05
NEDD4L-224ENST00000588712 PZPP20742 1482 aa15.38■□□□□ 0.05
NEDD4L-224ENST00000588712 ABCA6Q8N139 1617 aa15.37■□□□□ 0.05
NEDD4L-224ENST00000588712 ATP10AO60312 1499 aa15.37■□□□□ 0.05
NEDD4L-224ENST00000588712 DIP2CQ9Y2E4 1556 aa15.37■□□□□ 0.05
NEDD4L-224ENST00000588712 BCORL1Q5H9F3 1711 aa15.36■□□□□ 0.05
NEDD4L-224ENST00000588712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.36■□□□□ 0.057e-22■□□□□ 11.1
NEDD4L-224ENST00000588712 FAM135AQ9P2D6 1515 aa15.36■□□□□ 0.05
NEDD4L-224ENST00000588712 DEPDC5O75140 1603 aa15.36■□□□□ 0.05
NEDD4L-224ENST00000588712 IQGAP3Q86VI3 1631 aa15.36■□□□□ 0.05
NEDD4L-224ENST00000588712 COL17A1Q9UMD9 1497 aaPredicted RBP15.35■□□□□ 0.05
NEDD4L-224ENST00000588712 PKD2Q13563 968 aa15.35■□□□□ 0.05
NEDD4L-224ENST00000588712 REREQ9P2R6 1566 aa15.35■□□□□ 0.05
NEDD4L-224ENST00000588712 YEATS2Q9ULM3 1422 aa15.33■□□□□ 0.05
NEDD4L-224ENST00000588712 PRDM15P57071 1507 aaPredicted RBP15.32■□□□□ 0.04
NEDD4L-224ENST00000588712 RNF17Q9BXT8 1623 aaKnown RBP15.32■□□□□ 0.04
NEDD4L-224ENST00000588712 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
NEDD4L-224ENST00000588712 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
NEDD4L-224ENST00000588712 AGLP35573 1532 aa15.31■□□□□ 0.04
NEDD4L-224ENST00000588712 VWDEQ8N2E2 1590 aa15.3■□□□□ 0.04
NEDD4L-224ENST00000588712 NEUROD1Q13562 356 aa15.29■□□□□ 0.04
NEDD4L-224ENST00000588712 ARHGEF40Q8TER5 1519 aa15.29■□□□□ 0.04
NEDD4L-224ENST00000588712 GGT6Q6P531 493 aa15.29■□□□□ 0.04
NEDD4L-224ENST00000588712 SIN3AQ96ST3 1273 aa15.28■□□□□ 0.04
NEDD4L-224ENST00000588712 LMTK2Q8IWU2 1503 aa15.28■□□□□ 0.04
NEDD4L-224ENST00000588712 FOXD1Q16676 465 aa15.27■□□□□ 0.03
NEDD4L-224ENST00000588712 WASHC2CQ9Y4E1 1318 aa15.27■□□□□ 0.03
NEDD4L-224ENST00000588712 TET3O43151 1660 aa15.27■□□□□ 0.03
NEDD4L-224ENST00000588712 TONSLQ96HA7 1378 aa15.26■□□□□ 0.03
NEDD4L-224ENST00000588712 MROH1Q8NDA8 1641 aa15.26■□□□□ 0.03
NEDD4L-224ENST00000588712 RPRD2Q5VT52 1461 aaKnown RBP15.24■□□□□ 0.03
NEDD4L-224ENST00000588712 ZC3H13Q5T200 1668 aaKnown RBP15.23■□□□□ 0.03
NEDD4L-224ENST00000588712 CCDC144AA2RUR9 1427 aa15.21■□□□□ 0.03
NEDD4L-224ENST00000588712 EFCAB6Q5THR3 1501 aa15.21■□□□□ 0.02
NEDD4L-224ENST00000588712 ABCC3O15438 1527 aa15.2■□□□□ 0.02
NEDD4L-224ENST00000588712 E9PCH4 1651 aa15.2■□□□□ 0.02
NEDD4L-224ENST00000588712 PTPRTO14522 1441 aa15.2■□□□□ 0.02
NEDD4L-224ENST00000588712 ARHGAP31Q2M1Z3 1444 aa15.2■□□□□ 0.02
NEDD4L-224ENST00000588712 ESF1Q9H501 851 aaKnown RBP15.2■□□□□ 0.02
NEDD4L-224ENST00000588712 ARID4BQ4LE39 1312 aaPredicted RBP15.18■□□□□ 0.02
NEDD4L-224ENST00000588712 PPP1R15AO75807 674 aaPredicted RBP15.18■□□□□ 0.02
NEDD4L-224ENST00000588712 CEP152O94986 1710 aa15.17■□□□□ 0.02
NEDD4L-224ENST00000588712 TRPM2O94759 1503 aa15.16■□□□□ 0.02
NEDD4L-224ENST00000588712 PLA2R1Q13018 1463 aa15.16■□□□□ 0.02
NEDD4L-224ENST00000588712 CAMSAP1Q5T5Y3 1602 aa15.15■□□□□ 0.02
NEDD4L-224ENST00000588712 SPHKAPQ2M3C7 1700 aa15.15■□□□□ 0.02
NEDD4L-224ENST00000588712 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
NEDD4L-224ENST00000588712 NPATQ14207 1427 aa15.14■□□□□ 0.01
NEDD4L-224ENST00000588712 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
NEDD4L-224ENST00000588712 STAC3Q96MF2 364 aa15.14■□□□□ 0.01
NEDD4L-224ENST00000588712 L3MBTL2Q969R5 705 aa15.13■□□□□ 0.01
NEDD4L-224ENST00000588712 MLECQ14165 292 aa15.12■□□□□ 0.01
NEDD4L-224ENST00000588712 NEURL4Q96JN8 1562 aa15.11■□□□□ 0.01
NEDD4L-224ENST00000588712 SIGLEC1Q9BZZ2 1709 aa15.11■□□□□ 0.01
NEDD4L-224ENST00000588712 SLC52A1Q9NWF4 448 aa15.1■□□□□ 0.01
NEDD4L-224ENST00000588712 NOS1P29475 1434 aa15.1■□□□□ 0.01
NEDD4L-224ENST00000588712 CLTCQ00610 1675 aaKnown RBP15.08■□□□□ 0
NEDD4L-224ENST00000588712 ZMYM3Q14202 1370 aa15.06■□□□□ 0
NEDD4L-224ENST00000588712 CLTCL1P53675 1640 aa15.06■□□□□ 0
NEDD4L-224ENST00000588712 DCAF11Q8TEB1 546 aa15.05■□□□□ 0
NEDD4L-224ENST00000588712 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ 0
NEDD4L-224ENST00000588712 MROH2AA6NES4 1674 aa15.05■□□□□ 0
NEDD4L-224ENST00000588712 KIF1BO60333 1816 aa15.05■□□□□ -0
NEDD4L-224ENST00000588712 RGL3Q3MIN7 710 aa15.04■□□□□ -0
NEDD4L-224ENST00000588712 PREX1Q8TCU6 1659 aa15.04■□□□□ -0
NEDD4L-224ENST00000588712 UHRF1BP1Q6BDS2 1440 aa15.04■□□□□ -0
NEDD4L-224ENST00000588712 RPGRIP1LQ68CZ1 1315 aa15.04■□□□□ -0
NEDD4L-224ENST00000588712 CFAP65Q6ZU64 1925 aaKnown RBP15.03■□□□□ -0
NEDD4L-224ENST00000588712 ERVK-7P63135 1459 aa15.03■□□□□ -0
NEDD4L-224ENST00000588712 SPATA31D1Q6ZQQ2 1576 aa15.02□□□□□ -0.01
NEDD4L-224ENST00000588712 PIK3C2BO00750 1634 aa15.01□□□□□ -0.01
NEDD4L-224ENST00000588712 SYNMO15061 1565 aa15□□□□□ -0.01
NEDD4L-224ENST00000588712 ZNF316A6NFI3 1004 aaPredicted RBP15□□□□□ -0.01
NEDD4L-224ENST00000588712 IDI1Q13907 227 aa15□□□□□ -0.01
NEDD4L-224ENST00000588712 FBXO31Q5XUX0 539 aaPredicted RBP15□□□□□ -0.01
NEDD4L-224ENST00000588712 KDM2AQ9Y2K7 1162 aa15□□□□□ -0.01
NEDD4L-224ENST00000588712 FER1L4A9Z1Z3 1794 aa14.99□□□□□ -0.01
NEDD4L-224ENST00000588712 CHGAP10645 457 aaKnown RBP14.99□□□□□ -0.01
NEDD4L-224ENST00000588712 UGGT1Q9NYU2 1555 aa14.98□□□□□ -0.01
NEDD4L-224ENST00000588712 ZNF326Q5BKZ1 582 aaKnown RBP14.98□□□□□ -0.01
NEDD4L-224ENST00000588712 ADGRB3O60242 1522 aa14.98□□□□□ -0.01
NEDD4L-224ENST00000588712 NBPF8Q3BBV2 869 aa14.97□□□□□ -0.01
NEDD4L-224ENST00000588712 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
NEDD4L-224ENST00000588712 PRAG1Q86YV5 1406 aa14.96□□□□□ -0.01
NEDD4L-224ENST00000588712 TNRQ92752 1358 aa14.96□□□□□ -0.02
NEDD4L-224ENST00000588712 MYOM2P54296 1465 aa14.95□□□□□ -0.02
NEDD4L-224ENST00000588712 VGFO15240 615 aaPredicted RBP14.95□□□□□ -0.02
NEDD4L-224ENST00000588712 HDGFP51858 240 aaKnown RBP14.94□□□□□ -0.02
NEDD4L-224ENST00000588712 EIF4G2P78344 907 aaKnown RBP eCLIP14.94□□□□□ -0.02
NEDD4L-224ENST00000588712 RALGAPBQ86X10 1494 aa14.94□□□□□ -0.02
NEDD4L-224ENST00000588712 NLRP1Q9C000 1473 aa14.93□□□□□ -0.02
NEDD4L-224ENST00000588712 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
NEDD4L-224ENST00000588712 TMEM131LA2VDJ0 1609 aa14.92□□□□□ -0.02
NEDD4L-224ENST00000588712 C3P01024 1663 aa14.92□□□□□ -0.02
NEDD4L-224ENST00000588712 KDM5AP29375 1690 aaKnown RBP14.92□□□□□ -0.02
NEDD4L-224ENST00000588712 ZFYVE9O95405 1425 aa14.92□□□□□ -0.02
NEDD4L-224ENST00000588712 IFT172Q9UG01 1749 aa14.9□□□□□ -0.02
NEDD4L-224ENST00000588712 ROCK2O75116 1388 aaKnown RBP14.9□□□□□ -0.02
NEDD4L-224ENST00000588712 MADDQ8WXG6 1647 aa14.9□□□□□ -0.02
NEDD4L-224ENST00000588712 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms