RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CHIC2Q9UKJ5 165 aa15.46■□□□□ 0.07
TPM4-207ENST00000588032 CROCC2H7BZ55 1655 aa15.46■□□□□ 0.07
TPM4-207ENST00000588032 NCOA1Q15788 1441 aa15.45■□□□□ 0.06
TPM4-207ENST00000588032 FAM135AQ9P2D6 1515 aa15.45■□□□□ 0.06
TPM4-207ENST00000588032 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
TPM4-207ENST00000588032 ERBINQ96RT1 1412 aa15.44■□□□□ 0.06
TPM4-207ENST00000588032 ADGRL2O95490 1459 aa15.43■□□□□ 0.06
TPM4-207ENST00000588032 MROH2AA6NES4 1674 aa15.43■□□□□ 0.06
TPM4-207ENST00000588032 EIF2AK4Q9P2K8 1649 aaKnown RBP15.43■□□□□ 0.06
TPM4-207ENST00000588032 NPATQ14207 1427 aa15.42■□□□□ 0.06
TPM4-207ENST00000588032 RRBP1Q9P2E9 1410 aaKnown RBP15.41■□□□□ 0.06
TPM4-207ENST00000588032 C3P01024 1663 aa15.41■□□□□ 0.06
TPM4-207ENST00000588032 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
TPM4-207ENST00000588032 ROCK1Q13464 1354 aa15.4■□□□□ 0.06
TPM4-207ENST00000588032 SETD1BQ9UPS6 1966 aaKnown RBP15.4■□□□□ 0.06
TPM4-207ENST00000588032 RNF17Q9BXT8 1623 aaKnown RBP15.39■□□□□ 0.05
TPM4-207ENST00000588032 KDM5DQ9BY66 1539 aa15.39■□□□□ 0.05
TPM4-207ENST00000588032 CLTCQ00610 1675 aaKnown RBP15.39■□□□□ 0.05
TPM4-207ENST00000588032 UHRF1BP1Q6BDS2 1440 aa15.38■□□□□ 0.05
TPM4-207ENST00000588032 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
TPM4-207ENST00000588032 KANK1Q14678 1352 aa15.36■□□□□ 0.05
TPM4-207ENST00000588032 ITGAEP38570 1179 aa15.36■□□□□ 0.05
TPM4-207ENST00000588032 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
TPM4-207ENST00000588032 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
TPM4-207ENST00000588032 PREX1Q8TCU6 1659 aa15.35■□□□□ 0.05
TPM4-207ENST00000588032 PZPP20742 1482 aa15.34■□□□□ 0.05
TPM4-207ENST00000588032 HSPA2P54652 639 aa15.34■□□□□ 0.05
TPM4-207ENST00000588032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.059e-7■■□□□ 13.2
TPM4-207ENST00000588032 ZC3H13Q5T200 1668 aaKnown RBP15.33■□□□□ 0.04
TPM4-207ENST00000588032 ABCC3O15438 1527 aa15.33■□□□□ 0.04
TPM4-207ENST00000588032 PRDM15P57071 1507 aaPredicted RBP15.33■□□□□ 0.04
TPM4-207ENST00000588032 MROH1Q8NDA8 1641 aa15.32■□□□□ 0.04
TPM4-207ENST00000588032 FBXO31Q5XUX0 539 aaPredicted RBP15.32■□□□□ 0.04
TPM4-207ENST00000588032 DEPDC5O75140 1603 aa15.3■□□□□ 0.04
TPM4-207ENST00000588032 ARHGAP31Q2M1Z3 1444 aa15.3■□□□□ 0.04
TPM4-207ENST00000588032 TNRQ92752 1358 aa15.3■□□□□ 0.04
TPM4-207ENST00000588032 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
TPM4-207ENST00000588032 LMTK2Q8IWU2 1503 aa15.27■□□□□ 0.03
TPM4-207ENST00000588032 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
TPM4-207ENST00000588032 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
TPM4-207ENST00000588032 A2ML1A8K2U0 1454 aa15.25■□□□□ 0.03
TPM4-207ENST00000588032 NLRP1Q9C000 1473 aa15.25■□□□□ 0.03
TPM4-207ENST00000588032 SPATA31D1Q6ZQQ2 1576 aa15.24■□□□□ 0.03
TPM4-207ENST00000588032 ERVK-7P63135 1459 aa15.24■□□□□ 0.03
TPM4-207ENST00000588032 MYO3AQ8NEV4 1616 aa15.24■□□□□ 0.03
TPM4-207ENST00000588032 CEP170BQ9Y4F5 1589 aaPredicted RBP15.24■□□□□ 0.03
TPM4-207ENST00000588032 CEP152O94986 1710 aa15.23■□□□□ 0.03
TPM4-207ENST00000588032 THEMISQ8N1K5 641 aaPredicted RBP15.23■□□□□ 0.03
TPM4-207ENST00000588032 PKD2Q13563 968 aa15.22■□□□□ 0.03
TPM4-207ENST00000588032 ZNF142P52746 1687 aaPredicted RBP15.22■□□□□ 0.03
TPM4-207ENST00000588032 PLA2R1Q13018 1463 aa15.21■□□□□ 0.03
TPM4-207ENST00000588032 UNC13BO14795 1591 aa15.21■□□□□ 0.03
TPM4-207ENST00000588032 HFM1A2PYH4 1435 aa15.21■□□□□ 0.03
TPM4-207ENST00000588032 NAIPQ13075 1403 aa15.21■□□□□ 0.03
TPM4-207ENST00000588032 NUP155O75694 1391 aa15.21■□□□□ 0.02
TPM4-207ENST00000588032 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
TPM4-207ENST00000588032 PTPRTO14522 1441 aa15.18■□□□□ 0.02
TPM4-207ENST00000588032 EFCAB6Q5THR3 1501 aa15.18■□□□□ 0.02
TPM4-207ENST00000588032 SLC52A1Q9NWF4 448 aa15.18■□□□□ 0.02
TPM4-207ENST00000588032 UGGT1Q9NYU2 1555 aa15.18■□□□□ 0.02
TPM4-207ENST00000588032 ACIN1Q9UKV3 1341 aaKnown RBP15.17■□□□□ 0.02
TPM4-207ENST00000588032 NOS1P29475 1434 aa15.17■□□□□ 0.02
TPM4-207ENST00000588032 STRCQ7RTU9 1775 aa15.16■□□□□ 0.02
TPM4-207ENST00000588032 TET3O43151 1660 aa15.16■□□□□ 0.02
TPM4-207ENST00000588032 ANKLE2Q86XL3 938 aa15.16■□□□□ 0.02
TPM4-207ENST00000588032 NCKAP5LQ9HCH0 1330 aa15.16■□□□□ 0.02
TPM4-207ENST00000588032 IQGAP3Q86VI3 1631 aa15.15■□□□□ 0.02
TPM4-207ENST00000588032 IDI1Q13907 227 aa15.15■□□□□ 0.02
TPM4-207ENST00000588032 GCC2Q8IWJ2 1684 aa15.14■□□□□ 0.01
TPM4-207ENST00000588032 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
TPM4-207ENST00000588032 CFAP65Q6ZU64 1925 aaKnown RBP15.13■□□□□ 0.01
TPM4-207ENST00000588032 TRIM52Q96A61 297 aa15.12■□□□□ 0.01
TPM4-207ENST00000588032 EID1Q9Y6B2 187 aa15.09■□□□□ 0.01
TPM4-207ENST00000588032 SYNMO15061 1565 aa15.09■□□□□ 0.01
TPM4-207ENST00000588032 HDGFP51858 240 aaKnown RBP15.08■□□□□ 0
TPM4-207ENST00000588032 TXNDC2Q86VQ3 553 aa15.08■□□□□ 0
TPM4-207ENST00000588032 E9PCH4 1651 aa15.08■□□□□ 0
TPM4-207ENST00000588032 KDM5AP29375 1690 aaKnown RBP15.08■□□□□ 0
TPM4-207ENST00000588032 UBR1Q8IWV7 1749 aa15.07■□□□□ 0
TPM4-207ENST00000588032 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
TPM4-207ENST00000588032 TMEM2Q9UHN6 1383 aa15.07■□□□□ 0
TPM4-207ENST00000588032 SETD5Q9C0A6 1442 aa15.07■□□□□ 0
TPM4-207ENST00000588032 MED14O60244 1454 aa15.07■□□□□ 0
TPM4-207ENST00000588032 ARHGAP23Q9P227 1491 aa15.07■□□□□ 0
TPM4-207ENST00000588032 SLIT1O75093 1534 aa15.07■□□□□ 0
TPM4-207ENST00000588032 PIK3C2BO00750 1634 aa15.06■□□□□ 0
TPM4-207ENST00000588032 NPHP4O75161 1426 aaPredicted RBP15.05■□□□□ -0
TPM4-207ENST00000588032 SCAF11Q99590 1463 aaKnown RBP15.04■□□□□ -0
TPM4-207ENST00000588032 CERKQ8TCT0 537 aa15.04■□□□□ -0
TPM4-207ENST00000588032 POLR1AO95602 1720 aaPredicted RBP15.03■□□□□ -0
TPM4-207ENST00000588032 ADGRB3O60242 1522 aa15.03■□□□□ -0
TPM4-207ENST00000588032 HRCP23327 699 aa15.03■□□□□ -0
TPM4-207ENST00000588032 LTKP29376 864 aa15.03■□□□□ -0
TPM4-207ENST00000588032 NEURL4Q96JN8 1562 aa15.02■□□□□ -0
TPM4-207ENST00000588032 CHGAP10645 457 aaKnown RBP15.02■□□□□ -0
TPM4-207ENST00000588032 MPHOSPH9Q99550 1183 aa15.02■□□□□ -0
TPM4-207ENST00000588032 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.01□□□□□ -0.01
TPM4-207ENST00000588032 RAB3GAP2Q9H2M9 1393 aa14.99□□□□□ -0.01
TPM4-207ENST00000588032 ZNF335Q9H4Z2 1342 aaPredicted RBP14.99□□□□□ -0.01
TPM4-207ENST00000588032 TMEM131LA2VDJ0 1609 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms